RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 OSBPL3Q9H4L5 887 aa24.05■■□□□ 1.44
TRIM47-207ENST00000593089 DIAPH3Q9NSV4 1193 aa24.05■■□□□ 1.44
TRIM47-207ENST00000593089 Q9Y3F1 56 aa24.05■■□□□ 1.44
TRIM47-207ENST00000593089 GOLGA8HP0CJ92 632 aa24.04■■□□□ 1.44
TRIM47-207ENST00000593089 ACRP10323 421 aa24.04■■□□□ 1.44
TRIM47-207ENST00000593089 PSMC6P62333 389 aa24.04■■□□□ 1.44
TRIM47-207ENST00000593089 RNF207Q6ZRF8 634 aa24.04■■□□□ 1.44
TRIM47-207ENST00000593089 SLC43A3Q8NBI5 491 aa24.04■■□□□ 1.44
TRIM47-207ENST00000593089 SNHG28P0DPA3 235 aa24.03■■□□□ 1.44
TRIM47-207ENST00000593089 CYP2C18P33260 490 aa24.03■■□□□ 1.44
TRIM47-207ENST00000593089 TMEM240Q5SV17 173 aa24.03■■□□□ 1.44
TRIM47-207ENST00000593089 MAFAQ8NHW3 353 aaPredicted RBP24.03■■□□□ 1.44
TRIM47-207ENST00000593089 GRIN2DO15399 1336 aa24.03■■□□□ 1.44
TRIM47-207ENST00000593089 TMEM265A0A087WTH1 108 aa24.02■■□□□ 1.44
TRIM47-207ENST00000593089 DNAJB2P25686 324 aa24.02■■□□□ 1.44
TRIM47-207ENST00000593089 DUSP28Q4G0W2 176 aa24.02■■□□□ 1.44
TRIM47-207ENST00000593089 WDR11Q9BZH6 1224 aa24.02■■□□□ 1.44
TRIM47-207ENST00000593089 CPVLQ9H3G5 476 aa24.02■■□□□ 1.44
TRIM47-207ENST00000593089 PNMA2Q9UL42 364 aa24.02■■□□□ 1.44
TRIM47-207ENST00000593089 KDM4AO75164 1064 aa24.01■■□□□ 1.43
TRIM47-207ENST00000593089 FOSL2P15408 326 aa24.01■■□□□ 1.43
TRIM47-207ENST00000593089 USH1GQ495M9 461 aa24.01■■□□□ 1.43
TRIM47-207ENST00000593089 GPATCH4Q5T3I0 446 aaKnown RBP24.01■■□□□ 1.43
TRIM47-207ENST00000593089 ZNF365Q70YC5 407 aa24.01■■□□□ 1.43
TRIM47-207ENST00000593089 DGKHQ86XP1 1220 aa24.01■■□□□ 1.43
TRIM47-207ENST00000593089 UBA5Q9GZZ9 404 aa24.01■■□□□ 1.43
TRIM47-207ENST00000593089 HIPK3Q9H422 1215 aa24.01■■□□□ 1.43
TRIM47-207ENST00000593089 WDR19Q8NEZ3 1342 aa24.01■■□□□ 1.43
TRIM47-207ENST00000593089 CDH23Q9H251 3354 aa24■■□□□ 1.43
TRIM47-207ENST00000593089 LOC102724159A0A0B4J2E5 919 aa24■■□□□ 1.43
TRIM47-207ENST00000593089 RPS6P62753 249 aaKnown RBP24■■□□□ 1.43
TRIM47-207ENST00000593089 PDE4DQ08499 809 aa24■■□□□ 1.43
TRIM47-207ENST00000593089 PWP2Q15269 919 aaKnown RBP24■■□□□ 1.43
TRIM47-207ENST00000593089 PSRC1Q6PGN9 363 aaPredicted RBP24■■□□□ 1.43
TRIM47-207ENST00000593089 IQCA1Q86XH1 822 aa24■■□□□ 1.43
TRIM47-207ENST00000593089 TRPV6Q9H1D0 765 aa24■■□□□ 1.43
TRIM47-207ENST00000593089 UMODL1Q5DID0 1318 aa24■■□□□ 1.43
TRIM47-207ENST00000593089 B4E1Z4 1266 aa23.99■■□□□ 1.43
TRIM47-207ENST00000593089 HIP1O00291 1037 aa23.99■■□□□ 1.43
TRIM47-207ENST00000593089 B4GALT4O60513 344 aa23.99■■□□□ 1.43
TRIM47-207ENST00000593089 PNMA1Q8ND90 353 aa23.99■■□□□ 1.43
TRIM47-207ENST00000593089 TIFAQ96CG3 184 aa23.99■■□□□ 1.43
TRIM47-207ENST00000593089 MPHOSPH6Q99547 160 aaKnown RBP23.99■■□□□ 1.43
TRIM47-207ENST00000593089 SEZ6LQ9BYH1 1024 aa23.99■■□□□ 1.43
TRIM47-207ENST00000593089 KAT14Q9H8E8 782 aa23.99■■□□□ 1.43
TRIM47-207ENST00000593089 IL23AQ9NPF7 189 aa23.99■■□□□ 1.43
TRIM47-207ENST00000593089 UNC80Q8N2C7 3258 aa23.99■■□□□ 1.43
TRIM47-207ENST00000593089 RBM47A0AV96 593 aaKnown RBP23.98■■□□□ 1.43
TRIM47-207ENST00000593089 GRXCR1A8MXD5 290 aa23.98■■□□□ 1.43
TRIM47-207ENST00000593089 MYL3P08590 195 aa23.98■■□□□ 1.43
TRIM47-207ENST00000593089 CCL23P55773 120 aa23.98■■□□□ 1.43
TRIM47-207ENST00000593089 GRIN2CQ14957 1233 aa23.98■■□□□ 1.43
TRIM47-207ENST00000593089 CCDC178Q5BJE1 867 aa23.98■■□□□ 1.43
TRIM47-207ENST00000593089 RASIP1Q5U651 963 aa23.98■■□□□ 1.43
TRIM47-207ENST00000593089 OR6J1Q8NGC5 347 aa23.98■■□□□ 1.43
TRIM47-207ENST00000593089 POLR3EQ9NVU0 708 aa23.98■■□□□ 1.43
TRIM47-207ENST00000593089 A0A0C4DFX4 3053 aa23.97■■□□□ 1.43
TRIM47-207ENST00000593089 PBX2P40425 430 aa23.97■■□□□ 1.43
TRIM47-207ENST00000593089 CPT1AP50416 773 aa23.97■■□□□ 1.43
TRIM47-207ENST00000593089 CDC37Q16543 378 aaPredicted RBP23.97■■□□□ 1.43
TRIM47-207ENST00000593089 IMMTQ16891 758 aaKnown RBP23.97■■□□□ 1.43
TRIM47-207ENST00000593089 DNERQ8NFT8 737 aa23.97■■□□□ 1.43
TRIM47-207ENST00000593089 ZSCAN10Q96SZ4 725 aaPredicted RBP23.97■■□□□ 1.43
TRIM47-207ENST00000593089 DSCC1Q9BVC3 393 aa23.97■■□□□ 1.43
TRIM47-207ENST00000593089 NOC4LQ9BVI4 516 aaKnown RBP23.97■■□□□ 1.43
TRIM47-207ENST00000593089 COL25A1Q9BXS0 654 aaPredicted RBP23.97■■□□□ 1.43
TRIM47-207ENST00000593089 ZNF576Q9H609 170 aa23.97■■□□□ 1.43
TRIM47-207ENST00000593089 NT5C2P49902 561 aa23.96■■□□□ 1.43
TRIM47-207ENST00000593089 PURAQ00577 322 aaKnown RBP23.96■■□□□ 1.43
TRIM47-207ENST00000593089 PPP2R5BQ15173 497 aa23.96■■□□□ 1.43
TRIM47-207ENST00000593089 PBX4Q9BYU1 374 aa23.96■■□□□ 1.43
TRIM47-207ENST00000593089 ALDH8A1Q9H2A2 487 aaPredicted RBP23.96■■□□□ 1.43
TRIM47-207ENST00000593089 FGBP02675 491 aa23.95■■□□□ 1.42
TRIM47-207ENST00000593089 EDNRBP24530 442 aa23.95■■□□□ 1.42
TRIM47-207ENST00000593089 ADGRF4Q8IZF3 695 aa23.95■■□□□ 1.42
TRIM47-207ENST00000593089 ENAHQ8N8S7 591 aaPredicted RBP23.95■■□□□ 1.42
TRIM47-207ENST00000593089 COPS5Q92905 334 aa23.95■■□□□ 1.42
TRIM47-207ENST00000593089 WNT8AQ9H1J5 351 aa23.95■■□□□ 1.42
TRIM47-207ENST00000593089 GPHNQ9NQX3 736 aaPredicted RBP23.95■■□□□ 1.42
TRIM47-207ENST00000593089 ZSWIM5Q9P217 1185 aa23.95■■□□□ 1.42
TRIM47-207ENST00000593089 EYSQ5T1H1 3165 aa23.95■■□□□ 1.42
TRIM47-207ENST00000593089 MYH6P13533 1939 aa23.94■■□□□ 1.42
TRIM47-207ENST00000593089 TNKSO95271 1327 aa23.94■■□□□ 1.42
TRIM47-207ENST00000593089 DHX16O60231 1041 aaKnown RBP23.94■■□□□ 1.42
TRIM47-207ENST00000593089 SCFD2Q8WU76 684 aa23.94■■□□□ 1.42
TRIM47-207ENST00000593089 HERVK_113Q902F9 699 aa23.94■■□□□ 1.42
TRIM47-207ENST00000593089 TBC1D5Q92609 795 aa23.94■■□□□ 1.42
TRIM47-207ENST00000593089 ANKS1AQ92625 1134 aa23.94■■□□□ 1.42
TRIM47-207ENST00000593089 MTG1Q9BT17 334 aaPredicted RBP23.94■■□□□ 1.42
TRIM47-207ENST00000593089 TRMT13Q9NUP7 481 aaKnown RBP23.94■■□□□ 1.42
TRIM47-207ENST00000593089 CXXC1Q9P0U4 656 aaPredicted RBP23.94■■□□□ 1.42
TRIM47-207ENST00000593089 CTNNA3Q9UI47 895 aa23.94■■□□□ 1.42
TRIM47-207ENST00000593089 ABCB11O95342 1321 aa23.93■■□□□ 1.42
TRIM47-207ENST00000593089 RAD50Q92878 1312 aa23.93■■□□□ 1.42
TRIM47-207ENST00000593089 B4DLN1 442 aa23.93■■□□□ 1.42
TRIM47-207ENST00000593089 NKRFO15226 690 aaKnown RBP eCLIP23.93■■□□□ 1.42
TRIM47-207ENST00000593089 TXNP10599 105 aaKnown RBP23.93■■□□□ 1.42
TRIM47-207ENST00000593089 MRPL12P52815 198 aaKnown RBP23.93■■□□□ 1.42
TRIM47-207ENST00000593089 ASPRV1Q53RT3 343 aa23.93■■□□□ 1.42
TRIM47-207ENST00000593089 BRDTQ58F21 947 aaPredicted RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms