RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 PNMA8AQ86V59 439 aaPredicted RBP13.99□□□□□ -0.17
DNMT1-228ENST00000592705 RAET1EQ8TD07 263 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 GDAP1L1Q96MZ0 367 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 ADPGKQ9BRR6 497 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 KCNQ2O43526 872 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 NLRP10Q86W26 655 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 SLC35F6Q8N357 371 aa13.99□□□□□ -0.17
DNMT1-228ENST00000592705 PUS7LQ9H0K6 701 aaKnown RBP13.99□□□□□ -0.17
DNMT1-228ENST00000592705 ZNF365Q70YC5 407 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 CEP63Q96MT8 703 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 ALDH8A1Q9H2A2 487 aaPredicted RBP13.98□□□□□ -0.17
DNMT1-228ENST00000592705 A0A087WWV3 80 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 CYP2E1P05181 493 aaPredicted RBP13.98□□□□□ -0.17
DNMT1-228ENST00000592705 KMT5BQ4FZB7 885 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 PSMD1Q99460 953 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 ZNF341Q9BYN7 854 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 PDE11AQ9HCR9 933 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 AMFRQ9UKV5 643 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 A0A0G2JLW4 131 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 TMEM232C9JQI7 657 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 KLRF2D3W0D1 207 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 EXOC3O60645 756 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 LIFRP42702 1097 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 EZH2Q15910 746 aaKnown RBP13.98□□□□□ -0.17
DNMT1-228ENST00000592705 PPP2R5EQ16537 467 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 SPATS2Q86XZ4 545 aaKnown RBP13.98□□□□□ -0.17
DNMT1-228ENST00000592705 DHTKD1Q96HY7 919 aaPredicted RBP13.98□□□□□ -0.17
DNMT1-228ENST00000592705 PARP2Q9UGN5 583 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 XRCC5P13010 732 aaKnown RBP13.98□□□□□ -0.17
DNMT1-228ENST00000592705 GPIHBP1Q8IV16 184 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 GPKOWQ92917 476 aaPredicted RBP eCLIP13.98□□□□□ -0.172e-7■■□□□ 12.3
DNMT1-228ENST00000592705 MTFR1LQ9H019 292 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 SRPRBQ9Y5M8 271 aaKnown RBP13.98□□□□□ -0.17
DNMT1-228ENST00000592705 E9PCH4 1651 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 FERP16591 822 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 GNGT1P63211 74 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 APBA1Q02410 837 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 GPBP1Q86WP2 473 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 FBXO11Q86XK2 927 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 ZBTB8OSQ8IWT0 167 aa13.98□□□□□ -0.17
DNMT1-228ENST00000592705 GOLGA8FQ08AF8 430 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 GOLGA8DPQ0D2H9 430 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 LONRF2Q1L5Z9 754 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 ZNF658Q5TYW1 1059 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-228ENST00000592705 ZBTB33Q86T24 672 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 RABEP2Q9H5N1 569 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 PI4KBQ9UBF8 816 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 E7EVH7 732 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 MYL1P05976 194 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 SNX16P57768 344 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 RAD51AP2Q09MP3 1159 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 FAM160B1Q5W0V3 765 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 PLA2G4DQ86XP0 818 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 PANX2Q96RD6 677 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 LBHD1Q9BQE6 289 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-228ENST00000592705 TUBGCP2Q9BSJ2 902 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 ALKQ9UM73 1620 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 COL15A1P39059 1388 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 ZNF157P51786 506 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-228ENST00000592705 AK8Q96MA6 479 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 PCDHA4Q9UN74 947 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 ASNSP08243 561 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 KRT71Q3SY84 523 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 CCDC63Q8NA47 563 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 PGBD1Q96JS3 809 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 CNOT6LQ96LI5 555 aaKnown RBP13.97□□□□□ -0.17
DNMT1-228ENST00000592705 BPIFA3Q9BQP9 254 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 KANSL2Q9H9L4 492 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 RWDD2AQ9UIY3 292 aa13.97□□□□□ -0.17
DNMT1-228ENST00000592705 H7C1W4 665 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 SEC31AO94979 1220 aaKnown RBP13.96□□□□□ -0.17
DNMT1-228ENST00000592705 STAT1P42224 750 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 UBXN2AP68543 259 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 ATP11AP98196 1134 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 MAIP1Q8WWC4 291 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 RNF34Q969K3 372 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 CAPS2Q9BXY5 557 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 SEC31BQ9NQW1 1179 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 NRBP2Q9NSY0 501 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 PANK4Q9NVE7 773 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 ABCC12Q96J65 1359 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 BARGINQ6ZT62 677 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.96□□□□□ -0.17
DNMT1-228ENST00000592705 ASIC3Q9UHC3 531 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 SERPINB13Q9UIV8 391 aa13.96□□□□□ -0.17
DNMT1-228ENST00000592705 CCDC151A5D8V7 595 aa13.96□□□□□ -0.18
DNMT1-228ENST00000592705 GAS7O60861 476 aa13.96□□□□□ -0.18
DNMT1-228ENST00000592705 CTNNA1P35221 906 aaKnown RBP13.96□□□□□ -0.18
DNMT1-228ENST00000592705 MFSD14CQ5VZR4 134 aa13.96□□□□□ -0.18
DNMT1-228ENST00000592705 SLFN12Q8IYM2 578 aa13.96□□□□□ -0.18
DNMT1-228ENST00000592705 STIM2Q9P246 746 aa13.96□□□□□ -0.18
DNMT1-228ENST00000592705 PCDHA12Q9UN75 941 aa13.96□□□□□ -0.18
DNMT1-228ENST00000592705 KCNK3O14649 394 aa13.96□□□□□ -0.18
DNMT1-228ENST00000592705 ECE2O60344 883 aa13.96□□□□□ -0.18
DNMT1-228ENST00000592705 AOC3Q16853 763 aa13.96□□□□□ -0.18
DNMT1-228ENST00000592705 DENND2CQ68D51 928 aa13.96□□□□□ -0.18
DNMT1-228ENST00000592705 U2AF1L4Q8WU68 220 aaKnown RBP13.96□□□□□ -0.18
DNMT1-228ENST00000592705 SLC39A2Q9NP94 309 aa13.96□□□□□ -0.18
DNMT1-228ENST00000592705 ARMCX3Q9UH62 379 aaPredicted RBP13.96□□□□□ -0.18
DNMT1-228ENST00000592705 SPATA31A1Q5TZJ5 1347 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms