RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 RUBCNQ92622 972 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 C6orf50Q9HD87 102 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 AGPAT5Q9NUQ2 364 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 PLIN4Q96Q06 1357 aa12.97□□□□□ -0.33
ZNF540-210ENST00000592533 MYH7BA7E2Y1 1941 aa12.96□□□□□ -0.33
ZNF540-210ENST00000592533 LDHCP07864 332 aa12.96□□□□□ -0.33
ZNF540-210ENST00000592533 TRIM21P19474 475 aaKnown RBP12.96□□□□□ -0.33
ZNF540-210ENST00000592533 ITIH3Q06033 890 aa12.96□□□□□ -0.33
ZNF540-210ENST00000592533 PDE4DQ08499 809 aa12.96□□□□□ -0.33
ZNF540-210ENST00000592533 TBC1D8BQ0IIM8 1120 aa12.96□□□□□ -0.33
ZNF540-210ENST00000592533 STK4Q13043 487 aa12.96□□□□□ -0.33
ZNF540-210ENST00000592533 RTFDC1Q9BY42 306 aaPredicted RBP12.96□□□□□ -0.33
ZNF540-210ENST00000592533 VAV2P52735 878 aa12.96□□□□□ -0.34
ZNF540-210ENST00000592533 FNBP4Q8N3X1 1017 aaPredicted RBP12.96□□□□□ -0.34
ZNF540-210ENST00000592533 MMS19Q96T76 1030 aa12.96□□□□□ -0.34
ZNF540-210ENST00000592533 SUGCTQ9HAC7 445 aa12.96□□□□□ -0.34
ZNF540-210ENST00000592533 STK17AQ9UEE5 414 aa12.96□□□□□ -0.34
ZNF540-210ENST00000592533 KIF13BQ9NQT8 1826 aa12.96□□□□□ -0.34
ZNF540-210ENST00000592533 ARFGEF1Q9Y6D6 1849 aa12.96□□□□□ -0.34
ZNF540-210ENST00000592533 PVALEFA0A1B0GWK0 134 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
ZNF540-210ENST00000592533 NAPAP54920 295 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 ZSCAN26Q16670 478 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 MAP9Q49MG5 647 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 KIAA1328Q86T90 577 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 KIAA0895Q8NCT3 520 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 LACRTQ9GZZ8 138 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 HDAC6Q9UBN7 1215 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 PLAGL2Q9UPG8 496 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 GREB1LQ9C091 1923 aaPredicted RBP12.95□□□□□ -0.34
ZNF540-210ENST00000592533 LTBP1Q14766 1721 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 QSER1Q2KHR3 1735 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 MYH10P35580 1976 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 RCCD1A6NED2 376 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 LRRIQ3A6PVS8 624 aaPredicted RBP12.95□□□□□ -0.34
ZNF540-210ENST00000592533 CCNT1O60563 726 aaKnown RBP12.95□□□□□ -0.34
ZNF540-210ENST00000592533 ACTN2P35609 894 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 ARHGAP27Q6ZUM4 889 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 MTMR9Q96QG7 549 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 VPS18Q9P253 973 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 SIK3Q9Y2K2 1263 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 LRRC37AA6NMS7 1700 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 ZC3H4Q9UPT8 1303 aaKnown RBP12.95□□□□□ -0.34
ZNF540-210ENST00000592533 NUTM2BA6NNL0 878 aaPredicted RBP12.95□□□□□ -0.34
ZNF540-210ENST00000592533 NUTM2EB1AL46 878 aaPredicted RBP12.95□□□□□ -0.34
ZNF540-210ENST00000592533 PRLRP16471 622 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 ASIC1P78348 528 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 SLC44A5Q8NCS7 719 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 TGFBRAP1Q8WUH2 860 aa12.95□□□□□ -0.34
ZNF540-210ENST00000592533 RRP36Q96EU6 259 aaKnown RBP12.95□□□□□ -0.34
ZNF540-210ENST00000592533 NOC4LQ9BVI4 516 aaKnown RBP12.95□□□□□ -0.34
ZNF540-210ENST00000592533 SRP68Q9UHB9 627 aaKnown RBP12.95□□□□□ -0.34
ZNF540-210ENST00000592533 GPR75-ASB3A0A0A6YYF3 556 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 SMCO2A6NFE2 343 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 ENC1O14682 589 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 IPO7O95373 1038 aaKnown RBP12.94□□□□□ -0.34
ZNF540-210ENST00000592533 GYS2P54840 703 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 GRAPQ13588 217 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 FKBP15Q5T1M5 1219 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 ZNF804AQ7Z570 1209 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 GRAPLQ8TC17 118 aaPredicted RBP12.94□□□□□ -0.34
ZNF540-210ENST00000592533 PLIN2Q99541 437 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 SEMA6BQ9H3T3 888 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 N4BP1O75113 896 aaKnown RBP12.94□□□□□ -0.34
ZNF540-210ENST00000592533 FCER1AP12319 257 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 MTIF2P46199 727 aaKnown RBP12.94□□□□□ -0.34
ZNF540-210ENST00000592533 CDK8P49336 464 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 KLK7P49862 253 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 GRIK5Q16478 980 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 LETM2Q2VYF4 491 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 IQCEQ6IPM2 695 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 UNC13DQ70J99 1090 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 CALML4Q96GE6 196 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 RIOX1Q9H6W3 641 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 BLOC1S4Q9NUP1 217 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 STX8Q9UNK0 236 aa12.94□□□□□ -0.34
ZNF540-210ENST00000592533 ZNF263O14978 683 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 ZPR1O75312 459 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 SLC20A2Q08357 652 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 EHHADHQ08426 723 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 GRB10Q13322 594 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 DIXDC1Q155Q3 683 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 GUF1Q8N442 669 aaKnown RBP12.93□□□□□ -0.34
ZNF540-210ENST00000592533 FAM163AQ96GL9 167 aaPredicted RBP12.93□□□□□ -0.34
ZNF540-210ENST00000592533 EYA3Q99504 573 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 TSPYL1Q9H0U9 437 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 CWC15Q9P013 229 aaKnown RBP12.93□□□□□ -0.34
ZNF540-210ENST00000592533 JAG2Q9Y219 1238 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 FAN1Q9Y2M0 1017 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 PES1O00541 588 aaKnown RBP12.93□□□□□ -0.34
ZNF540-210ENST00000592533 LMAN1P49257 510 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 RAD51AP2Q09MP3 1159 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 SLC4A8Q2Y0W8 1093 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 VWA3BQ502W6 1294 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 HSP90B2PQ58FF3 399 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 TRIM58Q8NG06 486 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 EDEM3Q9BZQ6 932 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 JRKLQ9Y4A0 524 aa12.93□□□□□ -0.34
ZNF540-210ENST00000592533 THSD7AQ9UPZ6 1657 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms