RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 WNT8AQ9H1J5 351 aa13.86□□□□□ -0.19
CLIP3-204ENST00000590559 CXXC1Q9P0U4 656 aaPredicted RBP13.86□□□□□ -0.19
CLIP3-204ENST00000590559 KIAA1217Q5T5P2 1943 aa13.86□□□□□ -0.19
CLIP3-204ENST00000590559 TANC1Q9C0D5 1861 aa13.85□□□□□ -0.19
CLIP3-204ENST00000590559 B4GALT4O60513 344 aa13.85□□□□□ -0.19
CLIP3-204ENST00000590559 PDHBP11177 359 aa13.85□□□□□ -0.19
CLIP3-204ENST00000590559 EDNRBP24530 442 aa13.85□□□□□ -0.19
CLIP3-204ENST00000590559 BAATQ14032 418 aaPredicted RBP13.85□□□□□ -0.19
CLIP3-204ENST00000590559 NSMFQ6X4W1 530 aa13.85□□□□□ -0.19
CLIP3-204ENST00000590559 EEPD1Q7L9B9 569 aa13.85□□□□□ -0.19
CLIP3-204ENST00000590559 TTC14Q96N46 770 aa13.85□□□□□ -0.19
CLIP3-204ENST00000590559 CRBNQ96SW2 442 aa13.85□□□□□ -0.19
CLIP3-204ENST00000590559 AP5M1Q9H0R1 490 aa13.85□□□□□ -0.19
CLIP3-204ENST00000590559 TRPV6Q9H1D0 765 aa13.85□□□□□ -0.19
CLIP3-204ENST00000590559 HIPK3Q9H422 1215 aa13.85□□□□□ -0.19
CLIP3-204ENST00000590559 ISY1Q9ULR0 285 aaKnown RBP13.85□□□□□ -0.19
CLIP3-204ENST00000590559 MYH6P13533 1939 aa13.85□□□□□ -0.19
CLIP3-204ENST00000590559 PCP11498 1178 aaKnown RBP13.84□□□□□ -0.19
CLIP3-204ENST00000590559 PSMC6P62333 389 aa13.84□□□□□ -0.19
CLIP3-204ENST00000590559 ZNF543Q08ER8 600 aa13.84□□□□□ -0.19
CLIP3-204ENST00000590559 NMIQ13287 307 aaPredicted RBP13.84□□□□□ -0.19
CLIP3-204ENST00000590559 CCDC96Q2M329 555 aa13.84□□□□□ -0.19
CLIP3-204ENST00000590559 KIAA1211Q6ZU35 1233 aa13.84□□□□□ -0.19
CLIP3-204ENST00000590559 NOL8Q76FK4 1167 aaKnown RBP13.84□□□□□ -0.19
CLIP3-204ENST00000590559 ADD3Q9UEY8 706 aaKnown RBP13.84□□□□□ -0.19
CLIP3-204ENST00000590559 WDR19Q8NEZ3 1342 aa13.84□□□□□ -0.19
CLIP3-204ENST00000590559 BDP1A6H8Y1 2624 aa13.83□□□□□ -0.19
CLIP3-204ENST00000590559 ZEB2O60315 1214 aa13.83□□□□□ -0.2
CLIP3-204ENST00000590559 FGBP02675 491 aa13.83□□□□□ -0.2
CLIP3-204ENST00000590559 PURAQ00577 322 aaKnown RBP13.83□□□□□ -0.2
CLIP3-204ENST00000590559 AKNAD1Q5T1N1 836 aa13.83□□□□□ -0.2
CLIP3-204ENST00000590559 SLC30A10Q6XR72 485 aa13.83□□□□□ -0.2
CLIP3-204ENST00000590559 TBC1D10CQ8IV04 446 aa13.83□□□□□ -0.2
CLIP3-204ENST00000590559 ALDH8A1Q9H2A2 487 aaPredicted RBP13.83□□□□□ -0.2
CLIP3-204ENST00000590559 MTMR7Q9Y216 660 aa13.83□□□□□ -0.2
CLIP3-204ENST00000590559 PTPRSQ13332 1948 aa13.83□□□□□ -0.2
CLIP3-204ENST00000590559 FRMPD2Q68DX3 1309 aaPredicted RBP13.83□□□□□ -0.2
CLIP3-204ENST00000590559 CCDC171Q6TFL3 1326 aa13.83□□□□□ -0.2
CLIP3-204ENST00000590559 ADGRE1Q14246 886 aa13.82□□□□□ -0.2
CLIP3-204ENST00000590559 SMC5Q8IY18 1101 aa13.82□□□□□ -0.2
CLIP3-204ENST00000590559 RGS22Q8NE09 1264 aa13.82□□□□□ -0.2
CLIP3-204ENST00000590559 DNERQ8NFT8 737 aa13.82□□□□□ -0.2
CLIP3-204ENST00000590559 WDR11Q9BZH6 1224 aa13.82□□□□□ -0.2
CLIP3-204ENST00000590559 GPCPD1Q9NPB8 672 aa13.82□□□□□ -0.2
CLIP3-204ENST00000590559 POLR3EQ9NVU0 708 aa13.82□□□□□ -0.2
CLIP3-204ENST00000590559 PNMA2Q9UL42 364 aa13.82□□□□□ -0.2
CLIP3-204ENST00000590559 YBX2Q9Y2T7 364 aaKnown RBP13.82□□□□□ -0.2
CLIP3-204ENST00000590559 TRIP12Q14669 1992 aaPredicted RBP13.82□□□□□ -0.2
CLIP3-204ENST00000590559 TET1Q8NFU7 2136 aa13.81□□□□□ -0.2
CLIP3-204ENST00000590559 A6NJR5 290 aa13.81□□□□□ -0.2
CLIP3-204ENST00000590559 CCL23P55773 120 aa13.81□□□□□ -0.2
CLIP3-204ENST00000590559 HAND2P61296 217 aa13.81□□□□□ -0.2
CLIP3-204ENST00000590559 RPS6P62753 249 aaKnown RBP13.81□□□□□ -0.2
CLIP3-204ENST00000590559 RAB30Q15771 203 aa13.81□□□□□ -0.2
CLIP3-204ENST00000590559 RRP12Q5JTH9 1297 aaKnown RBP13.81□□□□□ -0.2
CLIP3-204ENST00000590559 RNF207Q6ZRF8 634 aa13.81□□□□□ -0.2
CLIP3-204ENST00000590559 MFSD6Q6ZSS7 791 aa13.81□□□□□ -0.2
CLIP3-204ENST00000590559 ANKS1AQ92625 1134 aa13.81□□□□□ -0.2
CLIP3-204ENST00000590559 MAF1Q9H063 256 aa13.81□□□□□ -0.2
CLIP3-204ENST00000590559 OSBPL3Q9H4L5 887 aa13.81□□□□□ -0.2
CLIP3-204ENST00000590559 PRDM12Q9H4Q4 367 aa13.81□□□□□ -0.2
CLIP3-204ENST00000590559 NEDD4P46934 1319 aa13.81□□□□□ -0.2
CLIP3-204ENST00000590559 PTPDC1A2A3K4 754 aa13.8□□□□□ -0.2
CLIP3-204ENST00000590559 NKRFO15226 690 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLIP3-204ENST00000590559 CPT1AP50416 773 aa13.8□□□□□ -0.2
CLIP3-204ENST00000590559 OTOP2Q7RTS6 562 aa13.8□□□□□ -0.2
CLIP3-204ENST00000590559 DGKHQ86XP1 1220 aa13.8□□□□□ -0.2
CLIP3-204ENST00000590559 TOMM22Q9NS69 142 aa13.8□□□□□ -0.2
CLIP3-204ENST00000590559 TRMT13Q9NUP7 481 aaKnown RBP13.8□□□□□ -0.2
CLIP3-204ENST00000590559 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
CLIP3-204ENST00000590559 ARIH2O95376 493 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 SDSP20132 328 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 CALML3P27482 149 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 NT5C2P49902 561 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 AAMPQ13685 434 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 TJAP1Q5JTD0 557 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 GPATCH4Q5T3I0 446 aaKnown RBP13.79□□□□□ -0.2
CLIP3-204ENST00000590559 CCDC62Q6P9F0 684 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 PLEKHM2Q8IWE5 1019 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 RPUSD2Q8IZ73 545 aaKnown RBP13.79□□□□□ -0.2
CLIP3-204ENST00000590559 SCFD2Q8WU76 684 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 SYMPKQ92797 1274 aaKnown RBP13.79□□□□□ -0.2
CLIP3-204ENST00000590559 SCLYQ96I15 445 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 GAS2L1Q99501 681 aaPredicted RBP13.79□□□□□ -0.2
CLIP3-204ENST00000590559 MTG1Q9BT17 334 aaPredicted RBP13.79□□□□□ -0.2
CLIP3-204ENST00000590559 LNPKQ9C0E8 428 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 MTIF3Q9H2K0 278 aaKnown RBP13.79□□□□□ -0.2
CLIP3-204ENST00000590559 NKX2-4Q9H2Z4 354 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 PRDM6Q9NQX0 595 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 MSRAQ9UJ68 235 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 MYH7BA7E2Y1 1941 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 TNKSO95271 1327 aa13.79□□□□□ -0.2
CLIP3-204ENST00000590559 PFKMP08237 780 aa13.78□□□□□ -0.2
CLIP3-204ENST00000590559 SUPT20HL2P0C7V6 817 aa13.78□□□□□ -0.2
CLIP3-204ENST00000590559 CYP2C9P11712 490 aa13.78□□□□□ -0.2
CLIP3-204ENST00000590559 TTLL4Q14679 1199 aa13.78□□□□□ -0.2
CLIP3-204ENST00000590559 NBPF20Q3BBV1 942 aa13.78□□□□□ -0.2
CLIP3-204ENST00000590559 NFRKBQ6P4R8 1299 aa13.78□□□□□ -0.2
CLIP3-204ENST00000590559 OR6J1Q8NGC5 347 aa13.78□□□□□ -0.2
CLIP3-204ENST00000590559 TBC1D5Q92609 795 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms