RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 SNHG28P0DPA3 235 aa21.05■□□□□ 0.96
PRKCSH-211ENST00000590098 ITGA7Q13683 1181 aa21.05■□□□□ 0.96
PRKCSH-211ENST00000590098 GPATCH4Q5T3I0 446 aaKnown RBP21.05■□□□□ 0.96
PRKCSH-211ENST00000590098 RNF207Q6ZRF8 634 aa21.05■□□□□ 0.96
PRKCSH-211ENST00000590098 C16orf59Q7L2K0 433 aa21.05■□□□□ 0.96
PRKCSH-211ENST00000590098 IQCA1Q86XH1 822 aa21.05■□□□□ 0.96
PRKCSH-211ENST00000590098 DGKHQ86XP1 1220 aa21.05■□□□□ 0.96
PRKCSH-211ENST00000590098 MPHOSPH6Q99547 160 aaKnown RBP21.05■□□□□ 0.96
PRKCSH-211ENST00000590098 SEZ6LQ9BYH1 1024 aa21.05■□□□□ 0.96
PRKCSH-211ENST00000590098 PPP1R12CQ9BZL4 782 aa21.05■□□□□ 0.96
PRKCSH-211ENST00000590098 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.04■□□□□ 0.96
PRKCSH-211ENST00000590098 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.04■□□□□ 0.96
PRKCSH-211ENST00000590098 SLC30A10Q6XR72 485 aa21.04■□□□□ 0.96
PRKCSH-211ENST00000590098 SLC43A3Q8NBI5 491 aa21.04■□□□□ 0.96
PRKCSH-211ENST00000590098 CLEC4DQ8WXI8 215 aa21.04■□□□□ 0.96
PRKCSH-211ENST00000590098 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.04■□□□□ 0.961e-6■■■□□ 19
PRKCSH-211ENST00000590098 WDR11Q9BZH6 1224 aa21.04■□□□□ 0.96
PRKCSH-211ENST00000590098 WDR19Q8NEZ3 1342 aa21.04■□□□□ 0.96
PRKCSH-211ENST00000590098 TMEM265A0A087WTH1 108 aa21.03■□□□□ 0.96
PRKCSH-211ENST00000590098 KDM4AO75164 1064 aa21.03■□□□□ 0.96
PRKCSH-211ENST00000590098 CD4P01730 458 aa21.03■□□□□ 0.96
PRKCSH-211ENST00000590098 GOLGA8HP0CJ92 632 aa21.03■□□□□ 0.96
PRKCSH-211ENST00000590098 CSF2RAP15509 400 aa21.03■□□□□ 0.96
PRKCSH-211ENST00000590098 DUSP28Q4G0W2 176 aa21.03■□□□□ 0.96
PRKCSH-211ENST00000590098 KAT14Q9H8E8 782 aa21.03■□□□□ 0.96
PRKCSH-211ENST00000590098 B4DLN1 442 aa21.02■□□□□ 0.96
PRKCSH-211ENST00000590098 MRPL12P52815 198 aaKnown RBP21.02■□□□□ 0.96
PRKCSH-211ENST00000590098 RPS6P62753 249 aaKnown RBP21.02■□□□□ 0.96
PRKCSH-211ENST00000590098 PDE4DQ08499 809 aa21.02■□□□□ 0.96
PRKCSH-211ENST00000590098 IMMTQ16891 758 aaKnown RBP21.02■□□□□ 0.96
PRKCSH-211ENST00000590098 PNMA1Q8ND90 353 aa21.02■□□□□ 0.96
PRKCSH-211ENST00000590098 MYLIPQ8WY64 445 aa21.02■□□□□ 0.96
PRKCSH-211ENST00000590098 DSCC1Q9BVC3 393 aa21.02■□□□□ 0.96
PRKCSH-211ENST00000590098 CTNNA3Q9UI47 895 aa21.02■□□□□ 0.96
PRKCSH-211ENST00000590098 CYP2C18P33260 490 aa21.01■□□□□ 0.95
PRKCSH-211ENST00000590098 CPT1AP50416 773 aa21.01■□□□□ 0.95
PRKCSH-211ENST00000590098 USH1GQ495M9 461 aa21.01■□□□□ 0.95
PRKCSH-211ENST00000590098 TMEM240Q5SV17 173 aa21.01■□□□□ 0.95
PRKCSH-211ENST00000590098 PSRC1Q6PGN9 363 aaPredicted RBP21.01■□□□□ 0.95
PRKCSH-211ENST00000590098 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.01■□□□□ 0.95
PRKCSH-211ENST00000590098 ZSCAN10Q96SZ4 725 aaPredicted RBP21.01■□□□□ 0.95
PRKCSH-211ENST00000590098 UBA5Q9GZZ9 404 aa21.01■□□□□ 0.95
PRKCSH-211ENST00000590098 HIPK3Q9H422 1215 aa21.01■□□□□ 0.95
PRKCSH-211ENST00000590098 POLR3EQ9NVU0 708 aa21.01■□□□□ 0.95
PRKCSH-211ENST00000590098 CDH23Q9H251 3354 aa21.01■□□□□ 0.95
PRKCSH-211ENST00000590098 GRIN2DO15399 1336 aa21.01■□□□□ 0.95
PRKCSH-211ENST00000590098 EYSQ5T1H1 3165 aa21■□□□□ 0.95
PRKCSH-211ENST00000590098 RBM47A0AV96 593 aaKnown RBP21■□□□□ 0.95
PRKCSH-211ENST00000590098 B4E1Z4 1266 aa21■□□□□ 0.95
PRKCSH-211ENST00000590098 DNAJB2P25686 324 aa21■□□□□ 0.95
PRKCSH-211ENST00000590098 PSMC6P62333 389 aa21■□□□□ 0.95
PRKCSH-211ENST00000590098 BRDTQ58F21 947 aaPredicted RBP21■□□□□ 0.95
PRKCSH-211ENST00000590098 DNERQ8NFT8 737 aa21■□□□□ 0.95
PRKCSH-211ENST00000590098 TRPV6Q9H1D0 765 aa21■□□□□ 0.95
PRKCSH-211ENST00000590098 GPHNQ9NQX3 736 aaPredicted RBP21■□□□□ 0.95
PRKCSH-211ENST00000590098 MYH6P13533 1939 aa21■□□□□ 0.95
PRKCSH-211ENST00000590098 ACRP10323 421 aa20.99■□□□□ 0.95
PRKCSH-211ENST00000590098 FOSL2P15408 326 aa20.99■□□□□ 0.95
PRKCSH-211ENST00000590098 PPP2R5BQ15173 497 aa20.99■□□□□ 0.95
PRKCSH-211ENST00000590098 ZNF365Q70YC5 407 aa20.99■□□□□ 0.95
PRKCSH-211ENST00000590098 RGS22Q8NE09 1264 aa20.99■□□□□ 0.95
PRKCSH-211ENST00000590098 OR6J1Q8NGC5 347 aa20.99■□□□□ 0.95
PRKCSH-211ENST00000590098 MAFAQ8NHW3 353 aaPredicted RBP20.99■□□□□ 0.95
PRKCSH-211ENST00000590098 ANKS1AQ92625 1134 aa20.99■□□□□ 0.95
PRKCSH-211ENST00000590098 KRT23Q9C075 422 aa20.99■□□□□ 0.95
PRKCSH-211ENST00000590098 CPVLQ9H3G5 476 aa20.99■□□□□ 0.95
PRKCSH-211ENST00000590098 IL23AQ9NPF7 189 aa20.99■□□□□ 0.95
PRKCSH-211ENST00000590098 ZSWIM5Q9P217 1185 aa20.99■□□□□ 0.95
PRKCSH-211ENST00000590098 RAD50Q92878 1312 aa20.99■□□□□ 0.95
PRKCSH-211ENST00000590098 NKRFO15226 690 aaKnown RBP eCLIP20.98■□□□□ 0.95
PRKCSH-211ENST00000590098 B4GALT4O60513 344 aa20.98■□□□□ 0.95
PRKCSH-211ENST00000590098 MYL3P08590 195 aa20.98■□□□□ 0.95
PRKCSH-211ENST00000590098 CDC37Q16543 378 aaPredicted RBP20.98■□□□□ 0.95
PRKCSH-211ENST00000590098 ASPRV1Q53RT3 343 aa20.98■□□□□ 0.95
PRKCSH-211ENST00000590098 SCFD2Q8WU76 684 aa20.98■□□□□ 0.95
PRKCSH-211ENST00000590098 TIFAQ96CG3 184 aa20.98■□□□□ 0.95
PRKCSH-211ENST00000590098 COL25A1Q9BXS0 654 aaPredicted RBP20.98■□□□□ 0.95
PRKCSH-211ENST00000590098 MTIF3Q9H2K0 278 aaKnown RBP20.98■□□□□ 0.95
PRKCSH-211ENST00000590098 CNNM2Q9H8M5 875 aa20.98■□□□□ 0.95
PRKCSH-211ENST00000590098 ABCB11O95342 1321 aa20.98■□□□□ 0.95
PRKCSH-211ENST00000590098 GRXCR1A8MXD5 290 aa20.97■□□□□ 0.95
PRKCSH-211ENST00000590098 DHX16O60231 1041 aaKnown RBP20.97■□□□□ 0.95
PRKCSH-211ENST00000590098 EDNRBP24530 442 aa20.97■□□□□ 0.95
PRKCSH-211ENST00000590098 ADGRF4Q8IZF3 695 aa20.97■□□□□ 0.95
PRKCSH-211ENST00000590098 ENAHQ8N8S7 591 aaPredicted RBP20.97■□□□□ 0.95
PRKCSH-211ENST00000590098 UBAC1Q9BSL1 405 aa20.97■□□□□ 0.95
PRKCSH-211ENST00000590098 MTG1Q9BT17 334 aaPredicted RBP20.97■□□□□ 0.95
PRKCSH-211ENST00000590098 MAF1Q9H063 256 aa20.97■□□□□ 0.95
PRKCSH-211ENST00000590098 ALDH8A1Q9H2A2 487 aaPredicted RBP20.97■□□□□ 0.95
PRKCSH-211ENST00000590098 PRUNE2Q8WUY3 3088 aa20.97■□□□□ 0.95
PRKCSH-211ENST00000590098 TNKSO95271 1327 aa20.97■□□□□ 0.95
PRKCSH-211ENST00000590098 FGBP02675 491 aa20.96■□□□□ 0.95
PRKCSH-211ENST00000590098 PARP1P09874 1014 aaKnown RBP20.96■□□□□ 0.95
PRKCSH-211ENST00000590098 SUPT20HL2P0C7V6 817 aa20.96■□□□□ 0.95
PRKCSH-211ENST00000590098 CCL23P55773 120 aa20.96■□□□□ 0.95
PRKCSH-211ENST00000590098 PURAQ00577 322 aaKnown RBP20.96■□□□□ 0.95
PRKCSH-211ENST00000590098 GRIN2CQ14957 1233 aa20.96■□□□□ 0.95
PRKCSH-211ENST00000590098 RASIP1Q5U651 963 aa20.96■□□□□ 0.95
PRKCSH-211ENST00000590098 NOC4LQ9BVI4 516 aaKnown RBP20.96■□□□□ 0.95
PRKCSH-211ENST00000590098 ZNF576Q9H609 170 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms