RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 A0A0D9SFI3 127 aa21.76■■□□□ 1.07
CCDC43-204ENST00000588687 RBM47A0AV96 593 aaKnown RBP21.76■■□□□ 1.07
CCDC43-204ENST00000588687 CCL23P55773 120 aa21.76■■□□□ 1.07
CCDC43-204ENST00000588687 BAATQ14032 418 aaPredicted RBP21.76■■□□□ 1.07
CCDC43-204ENST00000588687 SYDE2Q5VT97 1194 aa21.76■■□□□ 1.07
CCDC43-204ENST00000588687 CLEC4DQ8WXI8 215 aa21.76■■□□□ 1.07
CCDC43-204ENST00000588687 SYMPKQ92797 1274 aaKnown RBP21.76■■□□□ 1.07
CCDC43-204ENST00000588687 EVI5LQ96CN4 794 aa21.76■■□□□ 1.07
CCDC43-204ENST00000588687 FAM227BQ96M60 508 aa21.76■■□□□ 1.07
CCDC43-204ENST00000588687 TMEM47Q9BQJ4 181 aa21.76■■□□□ 1.07
CCDC43-204ENST00000588687 ALDH8A1Q9H2A2 487 aaPredicted RBP21.76■■□□□ 1.07
CCDC43-204ENST00000588687 MTMR7Q9Y216 660 aa21.76■■□□□ 1.07
CCDC43-204ENST00000588687 LOC102724159A0A0B4J2E5 919 aa21.75■■□□□ 1.07
CCDC43-204ENST00000588687 PWP2Q15269 919 aaKnown RBP21.75■■□□□ 1.07
CCDC43-204ENST00000588687 RAB30Q15771 203 aa21.75■■□□□ 1.07
CCDC43-204ENST00000588687 KIAA1211Q6ZU35 1233 aa21.75■■□□□ 1.07
CCDC43-204ENST00000588687 GAS2L1Q99501 681 aaPredicted RBP21.75■■□□□ 1.07
CCDC43-204ENST00000588687 HELLSQ9NRZ9 838 aa21.75■■□□□ 1.07
CCDC43-204ENST00000588687 TCP11L1Q9NUJ3 509 aa21.75■■□□□ 1.07
CCDC43-204ENST00000588687 FRMPD2Q68DX3 1309 aaPredicted RBP21.75■■□□□ 1.07
CCDC43-204ENST00000588687 ZEB2O60315 1214 aa21.74■■□□□ 1.07
CCDC43-204ENST00000588687 FGAP02671 866 aa21.74■■□□□ 1.07
CCDC43-204ENST00000588687 FGBP02675 491 aa21.74■■□□□ 1.07
CCDC43-204ENST00000588687 SNHG28P0DPA3 235 aa21.74■■□□□ 1.07
CCDC43-204ENST00000588687 PDHBP11177 359 aa21.74■■□□□ 1.07
CCDC43-204ENST00000588687 TOP1P11387 765 aaKnown RBP21.74■■□□□ 1.07
CCDC43-204ENST00000588687 EDNRBP24530 442 aa21.74■■□□□ 1.07
CCDC43-204ENST00000588687 PURAQ00577 322 aaKnown RBP21.74■■□□□ 1.07
CCDC43-204ENST00000588687 OTOP2Q7RTS6 562 aa21.74■■□□□ 1.07
CCDC43-204ENST00000588687 ZNF589Q86UQ0 364 aaPredicted RBP21.74■■□□□ 1.07
CCDC43-204ENST00000588687 NKX2-4Q9H2Z4 354 aa21.74■■□□□ 1.07
CCDC43-204ENST00000588687 TRMT13Q9NUP7 481 aaKnown RBP21.74■■□□□ 1.07
CCDC43-204ENST00000588687 PDE1AP54750 535 aa21.73■■□□□ 1.07
CCDC43-204ENST00000588687 SCLYQ96I15 445 aa21.73■■□□□ 1.07
CCDC43-204ENST00000588687 WDR11Q9BZH6 1224 aa21.73■■□□□ 1.07
CCDC43-204ENST00000588687 ADD3Q9UEY8 706 aaKnown RBP21.73■■□□□ 1.07
CCDC43-204ENST00000588687 MTIF3Q9H2K0 278 aaKnown RBP21.72■■□□□ 1.07
CCDC43-204ENST00000588687 MSRAQ9UJ68 235 aa21.72■■□□□ 1.07
CCDC43-204ENST00000588687 WDR19Q8NEZ3 1342 aa21.72■■□□□ 1.07
CCDC43-204ENST00000588687 HSPD1P10809 573 aaKnown RBP21.71■■□□□ 1.07
CCDC43-204ENST00000588687 ZNF543Q08ER8 600 aa21.71■■□□□ 1.07
CCDC43-204ENST00000588687 TBC1D10CQ8IV04 446 aa21.71■■□□□ 1.07
CCDC43-204ENST00000588687 GPCPD1Q9NPB8 672 aa21.71■■□□□ 1.07
CCDC43-204ENST00000588687 TNKSO95271 1327 aa21.71■■□□□ 1.07
CCDC43-204ENST00000588687 PTPRSQ13332 1948 aa21.7■■□□□ 1.07
CCDC43-204ENST00000588687 PTPDC1A2A3K4 754 aa21.7■■□□□ 1.06
CCDC43-204ENST00000588687 CYP2C9P11712 490 aa21.7■■□□□ 1.06
CCDC43-204ENST00000588687 RABGGTBP53611 331 aa21.7■■□□□ 1.06
CCDC43-204ENST00000588687 RRP1P56182 461 aaKnown RBP21.7■■□□□ 1.06
CCDC43-204ENST00000588687 MCMDC2Q4G0Z9 681 aa21.7■■□□□ 1.06
CCDC43-204ENST00000588687 RRP12Q5JTH9 1297 aaKnown RBP21.7■■□□□ 1.06
CCDC43-204ENST00000588687 ANKRD45Q5TZF3 282 aa21.7■■□□□ 1.06
CCDC43-204ENST00000588687 ATXN2LQ8WWM7 1075 aaKnown RBP21.7■■□□□ 1.06
CCDC43-204ENST00000588687 POLR3EQ9NVU0 708 aa21.7■■□□□ 1.06
CCDC43-204ENST00000588687 THEGQ9P2T0 379 aa21.7■■□□□ 1.06
CCDC43-204ENST00000588687 MYOGP15173 224 aa21.69■■□□□ 1.06
CCDC43-204ENST00000588687 CPT1AP50416 773 aa21.69■■□□□ 1.06
CCDC43-204ENST00000588687 RPS6P62753 249 aaKnown RBP21.69■■□□□ 1.06
CCDC43-204ENST00000588687 NMIQ13287 307 aaPredicted RBP21.69■■□□□ 1.06
CCDC43-204ENST00000588687 TTLL4Q14679 1199 aa21.69■■□□□ 1.06
CCDC43-204ENST00000588687 TICAM2Q86XR7 235 aa21.69■■□□□ 1.06
CCDC43-204ENST00000588687 TET1Q8NFU7 2136 aa21.69■■□□□ 1.06
CCDC43-204ENST00000588687 PPM1EQ8WY54 764 aa21.69■■□□□ 1.06
CCDC43-204ENST00000588687 SLC28A3Q9HAS3 691 aa21.69■■□□□ 1.06
CCDC43-204ENST00000588687 CALML3P27482 149 aa21.68■■□□□ 1.06
CCDC43-204ENST00000588687 HAND2P61296 217 aa21.68■■□□□ 1.06
CCDC43-204ENST00000588687 HDAC1Q13547 482 aaPredicted RBP21.68■■□□□ 1.06
CCDC43-204ENST00000588687 RNF207Q6ZRF8 634 aa21.68■■□□□ 1.06
CCDC43-204ENST00000588687 OR6J1Q8NGC5 347 aa21.68■■□□□ 1.06
CCDC43-204ENST00000588687 ASB2Q96Q27 587 aa21.68■■□□□ 1.06
CCDC43-204ENST00000588687 MTG1Q9BT17 334 aaPredicted RBP21.68■■□□□ 1.06
CCDC43-204ENST00000588687 TOMM22Q9NS69 142 aa21.68■■□□□ 1.06
CCDC43-204ENST00000588687 PCDHA11Q9Y5I1 949 aa21.68■■□□□ 1.06
CCDC43-204ENST00000588687 SLC4A7Q9Y6M7 1214 aa21.68■■□□□ 1.06
CCDC43-204ENST00000588687 NEDD4P46934 1319 aa21.68■■□□□ 1.06
CCDC43-204ENST00000588687 CCDC171Q6TFL3 1326 aa21.68■■□□□ 1.06
CCDC43-204ENST00000588687 A6NJR5 290 aa21.67■■□□□ 1.06
CCDC43-204ENST00000588687 TNFRSF10AO00220 468 aa21.67■■□□□ 1.06
CCDC43-204ENST00000588687 ARIH2O95376 493 aa21.67■■□□□ 1.06
CCDC43-204ENST00000588687 PFKMP08237 780 aa21.67■■□□□ 1.06
CCDC43-204ENST00000588687 PPP2R5BQ15173 497 aa21.67■■□□□ 1.06
CCDC43-204ENST00000588687 RPUSD2Q8IZ73 545 aaKnown RBP21.67■■□□□ 1.06
CCDC43-204ENST00000588687 COPS5Q92905 334 aa21.67■■□□□ 1.06
CCDC43-204ENST00000588687 KIAA1217Q5T5P2 1943 aa21.67■■□□□ 1.06
CCDC43-204ENST00000588687 NKRFO15226 690 aaKnown RBP eCLIP21.66■■□□□ 1.06
CCDC43-204ENST00000588687 MYL3P08590 195 aa21.66■■□□□ 1.06
CCDC43-204ENST00000588687 SUPT20HL2P0C7V6 817 aa21.66■■□□□ 1.06
CCDC43-204ENST00000588687 PCP11498 1178 aaKnown RBP21.66■■□□□ 1.06
CCDC43-204ENST00000588687 ATP2A2P16615 1042 aaKnown RBP21.66■■□□□ 1.06
CCDC43-204ENST00000588687 NBPF20Q3BBV1 942 aa21.66■■□□□ 1.06
CCDC43-204ENST00000588687 PPP2R2DQ66LE6 453 aa21.66■■□□□ 1.06
CCDC43-204ENST00000588687 DNERQ8NFT8 737 aa21.66■■□□□ 1.06
CCDC43-204ENST00000588687 PPP1R13LQ8WUF5 828 aa21.66■■□□□ 1.06
CCDC43-204ENST00000588687 TTC14Q96N46 770 aa21.66■■□□□ 1.06
CCDC43-204ENST00000588687 CRBNQ96SW2 442 aa21.66■■□□□ 1.06
CCDC43-204ENST00000588687 PNMA2Q9UL42 364 aa21.66■■□□□ 1.06
CCDC43-204ENST00000588687 COL4A4P53420 1690 aaPredicted RBP21.66■■□□□ 1.06
CCDC43-204ENST00000588687 PRRC2BQ5JSZ5 2229 aaKnown RBP21.65■■□□□ 1.06
CCDC43-204ENST00000588687 PITPNM1O00562 1244 aa21.65■■□□□ 1.06
CCDC43-204ENST00000588687 CCDC85BQ15834 202 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms