RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 MYO6Q9UM54 1294 aa22.17■■□□□ 1.14
MBD1-216ENST00000587605 SUGT1Q9Y2Z0 365 aa22.17■■□□□ 1.14
MBD1-216ENST00000587605 ABCB11O95342 1321 aa22.17■■□□□ 1.14
MBD1-216ENST00000587605 PVALEFA0A1B0GWK0 134 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 CCDC66A2RUB6 948 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 PES1O00541 588 aaKnown RBP22.16■■□□□ 1.14
MBD1-216ENST00000587605 AMPD2Q01433 879 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 LONRF2Q1L5Z9 754 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 ZSCAN29Q8IWY8 852 aaPredicted RBP22.16■■□□□ 1.14
MBD1-216ENST00000587605 CNOT6LQ96LI5 555 aaKnown RBP22.16■■□□□ 1.14
MBD1-216ENST00000587605 ERGIC2Q96RQ1 377 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 CHP1Q99653 195 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 FUT8Q9BYC5 575 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 EPC1Q9H2F5 836 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 PUF60Q9UHX1 559 aaKnown RBP22.16■■□□□ 1.14
MBD1-216ENST00000587605 IPO7O95373 1038 aaKnown RBP22.16■■□□□ 1.14
MBD1-216ENST00000587605 MFSD14BQ5SR56 506 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 FKBP15Q5T1M5 1219 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 FOXR2Q6PJQ5 311 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 FAM196AQ6ZSG2 479 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 SV2BQ7L1I2 683 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 PIGSQ96S52 555 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 PLIN2Q99541 437 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 ANKZF1Q9H8Y5 726 aa22.16■■□□□ 1.14
MBD1-216ENST00000587605 REXO2Q9Y3B8 237 aaKnown RBP22.16■■□□□ 1.14
MBD1-216ENST00000587605 MYO3BQ8WXR4 1341 aa22.15■■□□□ 1.14
MBD1-216ENST00000587605 B4DLN1 442 aa22.15■■□□□ 1.14
MBD1-216ENST00000587605 SASH3O75995 380 aa22.15■■□□□ 1.14
MBD1-216ENST00000587605 TBC1D8BQ0IIM8 1120 aa22.15■■□□□ 1.14
MBD1-216ENST00000587605 GPS2Q13227 327 aa22.15■■□□□ 1.14
MBD1-216ENST00000587605 SMC1AQ14683 1233 aaKnown RBP22.15■■□□□ 1.14
MBD1-216ENST00000587605 LRRC15Q8TF66 581 aa22.15■■□□□ 1.14
MBD1-216ENST00000587605 MTMR9Q96QG7 549 aa22.15■■□□□ 1.14
MBD1-216ENST00000587605 MAP2K7O14733 419 aa22.14■■□□□ 1.14
MBD1-216ENST00000587605 KRT86O43790 486 aa22.14■■□□□ 1.14
MBD1-216ENST00000587605 TRIM21P19474 475 aaKnown RBP22.14■■□□□ 1.14
MBD1-216ENST00000587605 TECP42680 631 aa22.14■■□□□ 1.14
MBD1-216ENST00000587605 MTIF2P46199 727 aaKnown RBP22.14■■□□□ 1.14
MBD1-216ENST00000587605 ADCY7P51828 1080 aa22.14■■□□□ 1.14
MBD1-216ENST00000587605 PDIA5Q14554 519 aa22.14■■□□□ 1.14
MBD1-216ENST00000587605 CALCRLQ16602 461 aa22.14■■□□□ 1.14
MBD1-216ENST00000587605 ANKRD40Q6AI12 368 aa22.14■■□□□ 1.14
MBD1-216ENST00000587605 MMTAG2Q9BU76 263 aaKnown RBP22.14■■□□□ 1.14
MBD1-216ENST00000587605 ST7Q9NRC1 585 aa22.14■■□□□ 1.14
MBD1-216ENST00000587605 LRRC37AA6NMS7 1700 aa22.14■■□□□ 1.13
MBD1-216ENST00000587605 EIF3CLB5ME19 914 aaKnown RBP22.14■■□□□ 1.13
MBD1-216ENST00000587605 PDHBP11177 359 aa22.14■■□□□ 1.13
MBD1-216ENST00000587605 HOXA10P31260 410 aaPredicted RBP22.14■■□□□ 1.13
MBD1-216ENST00000587605 WDR59Q6PJI9 974 aa22.14■■□□□ 1.13
MBD1-216ENST00000587605 UNC13DQ70J99 1090 aa22.14■■□□□ 1.13
MBD1-216ENST00000587605 HDXQ7Z353 690 aa22.14■■□□□ 1.13
MBD1-216ENST00000587605 RPGRIP1Q96KN7 1286 aa22.14■■□□□ 1.13
MBD1-216ENST00000587605 EIF3CQ99613 913 aaKnown RBP22.14■■□□□ 1.13
MBD1-216ENST00000587605 SNHG28P0DPA3 235 aa22.13■■□□□ 1.13
MBD1-216ENST00000587605 STK4Q13043 487 aa22.13■■□□□ 1.13
MBD1-216ENST00000587605 CENPPQ6IPU0 288 aa22.13■■□□□ 1.13
MBD1-216ENST00000587605 TRAPPC11Q7Z392 1133 aa22.13■■□□□ 1.13
MBD1-216ENST00000587605 GPR101Q96P66 508 aaPredicted RBP22.13■■□□□ 1.13
MBD1-216ENST00000587605 CRAMP1Q96RY5 1269 aa22.13■■□□□ 1.13
MBD1-216ENST00000587605 NOC4LQ9BVI4 516 aaKnown RBP22.13■■□□□ 1.13
MBD1-216ENST00000587605 TSGA10Q9BZW7 698 aa22.13■■□□□ 1.13
MBD1-216ENST00000587605 MTMR4Q9NYA4 1195 aa22.13■■□□□ 1.13
MBD1-216ENST00000587605 LRWD1Q9UFC0 647 aa22.13■■□□□ 1.13
MBD1-216ENST00000587605 USP17L5A8MUK1 530 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 MCM3P25205 808 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 KIAA1328Q86T90 577 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 CDK5RAP3Q96JB5 506 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 ZSWIM4Q9H7M6 989 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 SWAP70Q9UH65 585 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 GUCA1BQ9UMX6 200 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 EIF3JO75822 258 aaKnown RBP22.12■■□□□ 1.13
MBD1-216ENST00000587605 CYP2C19P33261 490 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 HERVK_113P62684 666 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 PSMD2Q13200 908 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 CCDC122Q5T0U0 273 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 POTEDQ86YR6 584 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 TBC1D16Q8TBP0 767 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 CPVLQ9H3G5 476 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 BIN2Q9UBW5 565 aaPredicted RBP22.12■■□□□ 1.13
MBD1-216ENST00000587605 USP21Q9UK80 565 aa22.12■■□□□ 1.13
MBD1-216ENST00000587605 IGKV6D-41A0A0C4DH26 115 aa22.11■■□□□ 1.13
MBD1-216ENST00000587605 OAS2P29728 719 aaKnown RBP22.11■■□□□ 1.13
MBD1-216ENST00000587605 GABPAQ06546 454 aa22.11■■□□□ 1.13
MBD1-216ENST00000587605 CKAP4Q07065 602 aaKnown RBP22.11■■□□□ 1.13
MBD1-216ENST00000587605 SEPT2Q15019 361 aa22.11■■□□□ 1.13
MBD1-216ENST00000587605 BEND6Q5SZJ8 279 aaPredicted RBP22.11■■□□□ 1.13
MBD1-216ENST00000587605 PAPD7Q5XG87 772 aaKnown RBP22.11■■□□□ 1.13
MBD1-216ENST00000587605 GUF1Q8N442 669 aaKnown RBP22.11■■□□□ 1.13
MBD1-216ENST00000587605 JAKMIP2Q96AA8 810 aa22.11■■□□□ 1.13
MBD1-216ENST00000587605 NAP1L4Q99733 375 aaKnown RBP22.11■■□□□ 1.13
MBD1-216ENST00000587605 VAT1LQ9HCJ6 419 aa22.11■■□□□ 1.13
MBD1-216ENST00000587605 UBR3Q6ZT12 1888 aa22.11■■□□□ 1.13
MBD1-216ENST00000587605 LTBP1Q14766 1721 aa22.1■■□□□ 1.13
MBD1-216ENST00000587605 QSER1Q2KHR3 1735 aa22.1■■□□□ 1.13
MBD1-216ENST00000587605 ANO9A1A5B4 782 aa22.1■■□□□ 1.13
MBD1-216ENST00000587605 SLC26A4O43511 780 aa22.1■■□□□ 1.13
MBD1-216ENST00000587605 HNRNPH3P31942 346 aaKnown RBP22.1■■□□□ 1.13
MBD1-216ENST00000587605 LRRC63Q05C16 580 aa22.1■■□□□ 1.13
MBD1-216ENST00000587605 GRB10Q13322 594 aa22.1■■□□□ 1.13
MBD1-216ENST00000587605 MIIPQ5JXC2 388 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms