RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 MYCLP12524 364 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 ELF2Q15723 593 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 APOBEC3HQ6NTF7 200 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 PPP2R2CQ9Y2T4 447 aa13.91□□□□□ -0.18
SMARCA4-208ENST00000585799 FGFR1OPO95684 399 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 ALAS1P13196 640 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 FAM83BQ5T0W9 1011 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 RGL2O15211 777 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 CCZ1BP86790 482 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 CCZ1P86791 482 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 TTLL12Q14166 644 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 SYDE2Q5VT97 1194 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 SHISA4Q96DD7 197 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 BPIFA3Q9BQP9 254 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 ANO3Q9BYT9 981 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 NLRC4Q9NPP4 1024 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 TJP1Q07157 1748 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 A0A0U1RQG5 324 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 DPEP1P16444 411 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 DPYDQ12882 1025 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 MTF1Q14872 753 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 TBC1D10BQ4KMP7 808 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 TMED8Q6PL24 325 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 HHIPL2Q6UWX4 724 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 TMEM179Q6ZVK1 233 aa13.9□□□□□ -0.18
SMARCA4-208ENST00000585799 CCDC65Q8IXS2 484 aa13.89□□□□□ -0.19
SMARCA4-208ENST00000585799 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-208ENST00000585799 E9PMD0 336 aa13.89□□□□□ -0.19
SMARCA4-208ENST00000585799 NDUFB10O96000 172 aa13.89□□□□□ -0.19
SMARCA4-208ENST00000585799 SHMT1P34896 483 aa13.89□□□□□ -0.19
SMARCA4-208ENST00000585799 DCAF17Q5H9S7 520 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-208ENST00000585799 SYCP3Q8IZU3 236 aa13.89□□□□□ -0.19
SMARCA4-208ENST00000585799 LRRC27Q9C0I9 530 aa13.89□□□□□ -0.19
SMARCA4-208ENST00000585799 ZMYND12Q9H0C1 365 aa13.89□□□□□ -0.19
SMARCA4-208ENST00000585799 PSMD14O00487 310 aa13.89□□□□□ -0.19
SMARCA4-208ENST00000585799 SYCP1Q15431 976 aa13.89□□□□□ -0.19
SMARCA4-208ENST00000585799 SLC30A10Q6XR72 485 aa13.89□□□□□ -0.19
SMARCA4-208ENST00000585799 MTERF4Q7Z6M4 381 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-208ENST00000585799 PRAMEF18Q5VWM3 479 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 CNOT6LQ96LI5 555 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 TMEM39BQ9GZU3 492 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 MYH2Q9UKX2 1941 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 N4BP2Q86UW6 1770 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 MACROD2A1Z1Q3 448 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 H7C1D1 291 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 SLC37A4O43826 429 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 FAM13AO94988 1023 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 TNIP1Q15025 636 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 ACRBPQ8NEB7 543 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 TUBGCP2Q9BSJ2 902 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 SPTLC3Q9NUV7 552 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 DNM3Q9UQ16 869 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 BAZ2AQ9UIF9 1905 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 ECE1P42892 770 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 MATR3P43243 847 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■■■■■ 30.1
SMARCA4-208ENST00000585799 ETF1P62495 437 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 CAPZA3Q96KX2 299 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 CCDC42Q96M95 316 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 PDCL3Q9H2J4 239 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 GOPCQ9HD26 462 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 SUGT1Q9Y2Z0 365 aa13.88□□□□□ -0.19
SMARCA4-208ENST00000585799 COL16A1Q07092 1604 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 POTEB3A0JP26 581 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 POTECB2RU33 542 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 LAD1O00515 517 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 FGRP09769 529 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 ERCC6LQ2NKX8 1250 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 POTEBQ6S5H4 581 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 TOGARAM2Q6ZUX3 1019 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 ACER1Q8TDN7 264 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 AK8Q96MA6 479 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.87□□□□□ -0.191e-6■■■■■ 151.6
SMARCA4-208ENST00000585799 PANK4Q9NVE7 773 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 SFI1A8K8P3 1242 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 IGSF3O75054 1194 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 FAM26FQ5R3K3 315 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 P2RX5Q93086 422 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 EHMT1Q9H9B1 1298 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 GOLGA6L9A6NEM1 432 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 PLSCR1O15162 318 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 STAT2P52630 851 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 STK4Q13043 487 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 IL17AQ16552 155 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 E4F1Q66K89 784 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 CHURC1Q8WUH1 139 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 RWDD2AQ9UIY3 292 aa13.87□□□□□ -0.19
SMARCA4-208ENST00000585799 NUP188Q5SRE5 1749 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 HAUS3Q68CZ6 603 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 RDH13Q8NBN7 331 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 DDX12PQ92771 950 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 SPAG5Q96R06 1193 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 ZNF341Q9BYN7 854 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 JADE2Q9NQC1 790 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 FLOT1O75955 427 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 KIF20AO95235 890 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 CCDC122Q5T0U0 273 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 FAM163AQ96GL9 167 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 IRX2Q9BZI1 471 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 POTEFA5A3E0 1075 aa13.86□□□□□ -0.19
SMARCA4-208ENST00000585799 GAS7O60861 476 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms