RNA–Protein interactions for RNA: ENST00000584538.1

USP22-211, Transcript of ubiquitin specific peptidase 22, human

TSL 4

Gene USP22, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP22-211	ENST00000584538	POTEB2	H3BUK9	544 aa		13.72	□□□□□ -0.21
USP22-211	ENST00000584538	CD2BP2	O95400	341 aa	Known RBP	13.72	□□□□□ -0.21
USP22-211	ENST00000584538	PRKAR2A	P13861	404 aa	Known RBP	13.72	□□□□□ -0.21
USP22-211	ENST00000584538	CYP2C19	P33261	490 aa		13.72	□□□□□ -0.21
USP22-211	ENST00000584538	CACNB2	Q08289	660 aa	Predicted RBP	13.72	□□□□□ -0.21
USP22-211	ENST00000584538	RABEP1	Q15276	862 aa		13.72	□□□□□ -0.21
USP22-211	ENST00000584538	ANKRD1	Q15327	319 aa		13.72	□□□□□ -0.21
USP22-211	ENST00000584538	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.72	□□□□□ -0.21
USP22-211	ENST00000584538	MORC4	Q8TE76	937 aa		13.72	□□□□□ -0.21
USP22-211	ENST00000584538	PHKB	Q93100	1093 aa		13.72	□□□□□ -0.21
USP22-211	ENST00000584538	GTF3C6	Q969F1	213 aa		13.72	□□□□□ -0.21
USP22-211	ENST00000584538	DDX11	Q96FC9	970 aa		13.72	□□□□□ -0.21
USP22-211	ENST00000584538	UNC93B1	Q9H1C4	597 aa		13.72	□□□□□ -0.21
USP22-211	ENST00000584538	UPF2	Q9HAU5	1272 aa	Known RBP	13.72	□□□□□ -0.21
USP22-211	ENST00000584538	PAK6	Q9NQU5	681 aa	Predicted RBP	13.72	□□□□□ -0.21
USP22-211	ENST00000584538	SEC63	Q9UGP8	760 aa	Known RBP	13.72	□□□□□ -0.21
USP22-211	ENST00000584538	MRPL11	Q9Y3B7	192 aa	Known RBP	13.72	□□□□□ -0.21
USP22-211	ENST00000584538	DDX49	Q9Y6V7	483 aa	Known RBP	13.72	□□□□□ -0.21
USP22-211	ENST00000584538	STXBP3	O00186	592 aa		13.71	□□□□□ -0.21
USP22-211	ENST00000584538	CTDNEP1	O95476	244 aa		13.71	□□□□□ -0.21
USP22-211	ENST00000584538	CCL5	P13501	91 aa		13.71	□□□□□ -0.21
USP22-211	ENST00000584538	EDNRB	P24530	442 aa		13.71	□□□□□ -0.21
USP22-211	ENST00000584538	ALDH5A1	P51649	535 aa	Predicted RBP	13.71	□□□□□ -0.21
USP22-211	ENST00000584538	STK3	Q13188	491 aa		13.71	□□□□□ -0.21
USP22-211	ENST00000584538	RNF207	Q6ZRF8	634 aa		13.71	□□□□□ -0.21
USP22-211	ENST00000584538	NOL8	Q76FK4	1167 aa	Known RBP	13.71	□□□□□ -0.21
USP22-211	ENST00000584538	TINF2	Q9BSI4	451 aa		13.71	□□□□□ -0.21
USP22-211	ENST00000584538	RNF26	Q9BY78	433 aa	Predicted RBP	13.71	□□□□□ -0.21
USP22-211	ENST00000584538	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.71	□□□□□ -0.21	3e-6	■■■■□ 24.9
USP22-211	ENST00000584538	SLC5A4	Q9NY91	659 aa		13.71	□□□□□ -0.21
USP22-211	ENST00000584538	STK36	Q9NRP7	1315 aa		13.7	□□□□□ -0.22
USP22-211	ENST00000584538	PTPDC1	A2A3K4	754 aa		13.7	□□□□□ -0.22
USP22-211	ENST00000584538	hCG_1984214	I3L0E3	225 aa		13.7	□□□□□ -0.22
USP22-211	ENST00000584538	PRPF3	O43395	683 aa	Known RBP	13.7	□□□□□ -0.22
USP22-211	ENST00000584538	SNAI1	O95863	264 aa	Predicted RBP	13.7	□□□□□ -0.22
USP22-211	ENST00000584538	CCND3	P30281	292 aa	Predicted RBP	13.7	□□□□□ -0.22
USP22-211	ENST00000584538	UBXN2A	P68543	259 aa		13.7	□□□□□ -0.22
USP22-211	ENST00000584538	PFKFB3	Q16875	520 aa	Predicted RBP	13.7	□□□□□ -0.22
USP22-211	ENST00000584538	PPP1R18	Q6NYC8	613 aa		13.7	□□□□□ -0.22
USP22-211	ENST00000584538	ARMCX2	Q7L311	632 aa		13.7	□□□□□ -0.22
USP22-211	ENST00000584538	MSL3	Q8N5Y2	521 aa	Known RBP	13.7	□□□□□ -0.22
USP22-211	ENST00000584538	ZNF713	Q8N859	430 aa	Predicted RBP	13.7	□□□□□ -0.22
USP22-211	ENST00000584538	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.7	□□□□□ -0.22
USP22-211	ENST00000584538		V9GY48	417 aa	Predicted RBP	13.7	□□□□□ -0.22
USP22-211	ENST00000584538	BRCA2	P51587	3418 aa		13.7	□□□□□ -0.22
USP22-211	ENST00000584538	RPTOR	Q8N122	1335 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	MYH7B	A7E2Y1	1941 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	ALPK3	Q96L96	1907 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	LOC102724159	A0A0B4J2E5	919 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	POTEF	A5A3E0	1075 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	MEIS2	O14770	477 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	PPFIA3	O75145	1194 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.69	□□□□□ -0.22
USP22-211	ENST00000584538	SCG2	P13521	617 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	CALML3	P27482	149 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	TRAF1	Q13077	416 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	PWP2	Q15269	919 aa	Known RBP	13.69	□□□□□ -0.22
USP22-211	ENST00000584538	MFSD14C	Q5VZR4	134 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	HEATR3	Q7Z4Q2	680 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	MCF2L2	Q86YR7	1114 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	NECAB1	Q8N987	351 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	SLK	Q9H2G2	1235 aa	Predicted RBP	13.69	□□□□□ -0.22
USP22-211	ENST00000584538	BARHL2	Q9NY43	387 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	NRBP1	Q9UHY1	535 aa		13.69	□□□□□ -0.22
USP22-211	ENST00000584538	PIK3CD	O00329	1044 aa		13.68	□□□□□ -0.22
USP22-211	ENST00000584538	ADAMTS3	O15072	1205 aa		13.68	□□□□□ -0.22
USP22-211	ENST00000584538	ADCY6	O43306	1168 aa		13.68	□□□□□ -0.22
USP22-211	ENST00000584538	DTNB	O60941	627 aa		13.68	□□□□□ -0.22
USP22-211	ENST00000584538	CFB	P00751	764 aa		13.68	□□□□□ -0.22
USP22-211	ENST00000584538	HOXA13	P31271	388 aa	Predicted RBP	13.68	□□□□□ -0.22
USP22-211	ENST00000584538	SAMD3	Q8N6K7	520 aa		13.68	□□□□□ -0.22
USP22-211	ENST00000584538	NSUN7	Q8NE18	718 aa	Known RBP	13.68	□□□□□ -0.22
USP22-211	ENST00000584538	DNER	Q8NFT8	737 aa		13.68	□□□□□ -0.22
USP22-211	ENST00000584538	IL31RA	Q8NI17	732 aa		13.68	□□□□□ -0.22
USP22-211	ENST00000584538	TAAR1	Q96RJ0	339 aa		13.68	□□□□□ -0.22
USP22-211	ENST00000584538	SLC26A6	Q9BXS9	759 aa		13.68	□□□□□ -0.22
USP22-211	ENST00000584538	MAP3K20	Q9NYL2	800 aa	Known RBP	13.68	□□□□□ -0.22
USP22-211	ENST00000584538	RBM27	Q9P2N5	1060 aa	Known RBP	13.68	□□□□□ -0.22
USP22-211	ENST00000584538	BIN2	Q9UBW5	565 aa	Predicted RBP	13.68	□□□□□ -0.22
USP22-211	ENST00000584538	KIAA0100	Q14667	2235 aa	Known RBP	13.67	□□□□□ -0.22
USP22-211	ENST00000584538	ESYT2	A0FGR8	921 aa		13.67	□□□□□ -0.22
USP22-211	ENST00000584538	MYC	P01106	439 aa	Predicted RBP	13.67	□□□□□ -0.22
USP22-211	ENST00000584538	GJB1	P08034	283 aa		13.67	□□□□□ -0.22
USP22-211	ENST00000584538	SOX10	P56693	466 aa		13.67	□□□□□ -0.22
USP22-211	ENST00000584538	PRAMEF19	Q5SWL8	479 aa		13.67	□□□□□ -0.22
USP22-211	ENST00000584538	AIFM3	Q96NN9	605 aa		13.67	□□□□□ -0.22
USP22-211	ENST00000584538	CRISPLD2	Q9H0B8	497 aa		13.67	□□□□□ -0.22
USP22-211	ENST00000584538	HMX1	Q9NP08	348 aa	Predicted RBP	13.67	□□□□□ -0.22
USP22-211	ENST00000584538	PXMP2	Q9NR77	195 aa		13.67	□□□□□ -0.22
USP22-211	ENST00000584538	LIMCH1	Q9UPQ0	1083 aa		13.67	□□□□□ -0.22
USP22-211	ENST00000584538	DOCK5	Q9H7D0	1870 aa		13.67	□□□□□ -0.22
USP22-211	ENST00000584538	ASB14	A6NK59	587 aa		13.66	□□□□□ -0.22
USP22-211	ENST00000584538	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.66	□□□□□ -0.22
USP22-211	ENST00000584538	JAK2	O60674	1132 aa		13.66	□□□□□ -0.22
USP22-211	ENST00000584538	POLR2M	P0CAP2	368 aa		13.66	□□□□□ -0.22
USP22-211	ENST00000584538	FDPS	P14324	419 aa	Known RBP	13.66	□□□□□ -0.22
USP22-211	ENST00000584538	CLK2	P49760	499 aa	Known RBP	13.66	□□□□□ -0.22
USP22-211	ENST00000584538	NAPA	P54920	295 aa		13.66	□□□□□ -0.22
USP22-211	ENST00000584538	NPY5R	Q15761	445 aa		13.66	□□□□□ -0.22
USP22-211	ENST00000584538	UBE2S	Q16763	222 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms