RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 BLOC1S2Q6QNY1 142 aa28.85■■■□□ 2.21
TTC39C-209ENST00000584250 Q6ZUG5 572 aa28.85■■■□□ 2.21
TTC39C-209ENST00000584250 FBXO16Q8IX29 292 aaPredicted RBP28.85■■■□□ 2.21
TTC39C-209ENST00000584250 CCDC82Q8N4S0 544 aa28.85■■■□□ 2.21
TTC39C-209ENST00000584250 FANCBQ8NB91 859 aa28.85■■■□□ 2.21
TTC39C-209ENST00000584250 RGS22Q8NE09 1264 aa28.85■■■□□ 2.21
TTC39C-209ENST00000584250 SYTL5Q8TDW5 730 aaPredicted RBP28.85■■■□□ 2.21
TTC39C-209ENST00000584250 MORC4Q8TE76 937 aa28.85■■■□□ 2.21
TTC39C-209ENST00000584250 TAAR1Q96RJ0 339 aa28.85■■■□□ 2.21
TTC39C-209ENST00000584250 SPZ1Q9BXG8 430 aa28.85■■■□□ 2.21
TTC39C-209ENST00000584250 MRPL11Q9Y3B7 192 aaKnown RBP28.85■■■□□ 2.21
TTC39C-209ENST00000584250 PNMA6FA0A0J9YX94 578 aa28.84■■■□□ 2.21
TTC39C-209ENST00000584250 hCG_1642624A0A1W2PR95 340 aa28.84■■■□□ 2.21
TTC39C-209ENST00000584250 HMGB1P09429 215 aaKnown RBP28.84■■■□□ 2.21
TTC39C-209ENST00000584250 RARBP10826 455 aa28.84■■■□□ 2.21
TTC39C-209ENST00000584250 CASTP20810 708 aaKnown RBP28.84■■■□□ 2.21
TTC39C-209ENST00000584250 RPS6KB1P23443 525 aa28.84■■■□□ 2.21
TTC39C-209ENST00000584250 LRRC41Q15345 812 aa28.84■■■□□ 2.21
TTC39C-209ENST00000584250 DPF3Q92784 378 aa28.84■■■□□ 2.21
TTC39C-209ENST00000584250 XPNPEP3Q9NQH7 507 aa28.84■■■□□ 2.21
TTC39C-209ENST00000584250 FAM184BQ9ULE4 1060 aa28.84■■■□□ 2.21
TTC39C-209ENST00000584250 KLF18A0A0U1RQI7 1052 aa28.83■■■□□ 2.21
TTC39C-209ENST00000584250 EPB41L2O43491 1005 aaKnown RBP28.83■■■□□ 2.21
TTC39C-209ENST00000584250 CALM1P0DP23 149 aa28.83■■■□□ 2.21
TTC39C-209ENST00000584250 CALM2P0DP24 149 aa28.83■■■□□ 2.21
TTC39C-209ENST00000584250 CALM3P0DP25 149 aa28.83■■■□□ 2.21
TTC39C-209ENST00000584250 ADCYAP1R1P41586 468 aa28.83■■■□□ 2.21
TTC39C-209ENST00000584250 APOBRQ0VD83 1088 aa28.83■■■□□ 2.21
TTC39C-209ENST00000584250 ADD3Q9UEY8 706 aaKnown RBP28.83■■■□□ 2.21
TTC39C-209ENST00000584250 MYADML2A6NDP7 307 aa28.82■■■□□ 2.2
TTC39C-209ENST00000584250 CFBP00751 764 aa28.82■■■□□ 2.2
TTC39C-209ENST00000584250 TAPT1Q6NXT6 567 aa28.82■■■□□ 2.2
TTC39C-209ENST00000584250 TMTC3Q6ZXV5 915 aa28.82■■■□□ 2.2
TTC39C-209ENST00000584250 BRF1Q92994 677 aa28.82■■■□□ 2.2
TTC39C-209ENST00000584250 HTATIP2Q9BUP3 242 aa28.82■■■□□ 2.2
TTC39C-209ENST00000584250 FAM217BQ9NTX9 383 aaPredicted RBP28.82■■■□□ 2.2
TTC39C-209ENST00000584250 PCDH10Q9P2E7 1040 aa28.82■■■□□ 2.2
TTC39C-209ENST00000584250 SYNRGQ9UMZ2 1314 aa28.81■■■□□ 2.2
TTC39C-209ENST00000584250 DNM1LO00429 736 aa28.81■■■□□ 2.2
TTC39C-209ENST00000584250 ADAMTS4O75173 837 aa28.81■■■□□ 2.2
TTC39C-209ENST00000584250 SEC24BO95487 1268 aa28.81■■■□□ 2.2
TTC39C-209ENST00000584250 ARRDC4Q8NCT1 418 aa28.81■■■□□ 2.2
TTC39C-209ENST00000584250 SENP6Q9GZR1 1112 aaPredicted RBP28.81■■■□□ 2.2
TTC39C-209ENST00000584250 ZBTB43O43298 467 aa28.8■■■□□ 2.2
TTC39C-209ENST00000584250 EDNRBP24530 442 aa28.8■■■□□ 2.2
TTC39C-209ENST00000584250 SMARCA1P28370 1054 aa28.8■■■□□ 2.2
TTC39C-209ENST00000584250 CDC27P30260 824 aa28.8■■■□□ 2.2
TTC39C-209ENST00000584250 HOXA13P31271 388 aaPredicted RBP28.8■■■□□ 2.2
TTC39C-209ENST00000584250 GNAQP50148 359 aa28.8■■■□□ 2.2
TTC39C-209ENST00000584250 MCF2L2Q86YR7 1114 aa28.8■■■□□ 2.2
TTC39C-209ENST00000584250 RRP36Q96EU6 259 aaKnown RBP28.8■■■□□ 2.2
TTC39C-209ENST00000584250 LZTS2Q9BRK4 669 aa28.8■■■□□ 2.2
TTC39C-209ENST00000584250 HSD17B4P51659 736 aa28.79■■■□□ 2.2
TTC39C-209ENST00000584250 FUT2Q10981 343 aa28.79■■■□□ 2.2
TTC39C-209ENST00000584250 LRRC26Q2I0M4 334 aa28.79■■■□□ 2.2
TTC39C-209ENST00000584250 SYNE3Q6ZMZ3 975 aa28.79■■■□□ 2.2
TTC39C-209ENST00000584250 DNERQ8NFT8 737 aa28.79■■■□□ 2.2
TTC39C-209ENST00000584250 FERMT2Q96AC1 680 aa28.79■■■□□ 2.2
TTC39C-209ENST00000584250 UPF3BQ9BZI7 483 aaKnown RBP28.79■■■□□ 2.2
TTC39C-209ENST00000584250 ZSWIM6Q9HCJ5 1215 aa28.79■■■□□ 2.2
TTC39C-209ENST00000584250 NAP1L2Q9ULW6 460 aaPredicted RBP28.79■■■□□ 2.2
TTC39C-209ENST00000584250 CEP290O15078 2479 aa28.79■■■□□ 2.2
TTC39C-209ENST00000584250 H0YGN5 161 aa28.78■■■□□ 2.2
TTC39C-209ENST00000584250 DUSP11O75319 330 aaKnown RBP28.78■■■□□ 2.2
TTC39C-209ENST00000584250 SMPD1P17405 629 aa28.78■■■□□ 2.2
TTC39C-209ENST00000584250 PSMA5P28066 241 aa28.78■■■□□ 2.2
TTC39C-209ENST00000584250 FGD1P98174 961 aa28.78■■■□□ 2.2
TTC39C-209ENST00000584250 GHRHRQ02643 423 aa28.78■■■□□ 2.2
TTC39C-209ENST00000584250 AGXT2Q9BYV1 514 aa28.78■■■□□ 2.2
TTC39C-209ENST00000584250 CNTNAP5Q8WYK1 1306 aa28.77■■■□□ 2.2
TTC39C-209ENST00000584250 GOLGA8AA7E2F4 631 aa28.77■■■□□ 2.2
TTC39C-209ENST00000584250 GOLGA8BA8MQT2 603 aa28.77■■■□□ 2.2
TTC39C-209ENST00000584250 KBTBD13C9JR72 458 aa28.77■■■□□ 2.2
TTC39C-209ENST00000584250 CTAGE5O15320 804 aa28.77■■■□□ 2.2
TTC39C-209ENST00000584250 ATN1P54259 1190 aaPredicted RBP28.77■■■□□ 2.2
TTC39C-209ENST00000584250 TNFAIP2Q03169 654 aa28.77■■■□□ 2.2
TTC39C-209ENST00000584250 RTN1Q16799 776 aa28.77■■■□□ 2.2
TTC39C-209ENST00000584250 PRPF38BQ5VTL8 546 aaKnown RBP28.77■■■□□ 2.2
TTC39C-209ENST00000584250 RUFY3Q7L099 469 aa28.77■■■□□ 2.2
TTC39C-209ENST00000584250 VTA1Q9NP79 307 aa28.77■■■□□ 2.2
TTC39C-209ENST00000584250 PDE4DQ08499 809 aa28.76■■■□□ 2.19
TTC39C-209ENST00000584250 TOB2Q14106 344 aaPredicted RBP28.76■■■□□ 2.19
TTC39C-209ENST00000584250 KLHDC9Q8NEP7 349 aa28.76■■■□□ 2.19
TTC39C-209ENST00000584250 RMDN3Q96TC7 470 aa28.76■■■□□ 2.19
TTC39C-209ENST00000584250 LARP6Q9BRS8 491 aaKnown RBP28.76■■■□□ 2.19
TTC39C-209ENST00000584250 GNEQ9Y223 722 aaKnown RBP28.76■■■□□ 2.19
TTC39C-209ENST00000584250 EVI5O60447 810 aa28.75■■■□□ 2.19
TTC39C-209ENST00000584250 EIF2AK2P19525 551 aaKnown RBP28.75■■■□□ 2.19
TTC39C-209ENST00000584250 ADD1P35611 737 aaKnown RBP28.75■■■□□ 2.19
TTC39C-209ENST00000584250 CCSAPQ6IQ19 270 aaPredicted RBP28.75■■■□□ 2.19
TTC39C-209ENST00000584250 UPF3AQ9H1J1 476 aaKnown RBP28.75■■■□□ 2.19
TTC39C-209ENST00000584250 LOC102724159A0A0B4J2E5 919 aa28.74■■■□□ 2.19
TTC39C-209ENST00000584250 PWP2Q15269 919 aaKnown RBP28.74■■■□□ 2.19
TTC39C-209ENST00000584250 NOL8Q76FK4 1167 aaKnown RBP28.74■■■□□ 2.19
TTC39C-209ENST00000584250 RNF180Q86T96 592 aa28.74■■■□□ 2.19
TTC39C-209ENST00000584250 C7orf61Q8IZ16 206 aa28.74■■■□□ 2.19
TTC39C-209ENST00000584250 FBXL16Q8N461 479 aa28.74■■■□□ 2.19
TTC39C-209ENST00000584250 NSUN6Q8TEA1 469 aaKnown RBP28.74■■■□□ 2.19
TTC39C-209ENST00000584250 GPKOWQ92917 476 aaPredicted RBP eCLIP28.74■■■□□ 2.19
TTC39C-209ENST00000584250 MAF1Q9H063 256 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms