RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 VTA1Q9NP79 307 aa15.9■□□□□ 0.14
CDK5RAP3-233ENST00000584186 GNEQ9Y223 722 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP3-233ENST00000584186 DCDC2CA8MYV0 355 aa15.89■□□□□ 0.13
CDK5RAP3-233ENST00000584186 PDE4DQ08499 809 aa15.89■□□□□ 0.13
CDK5RAP3-233ENST00000584186 FSCN1Q16658 493 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-233ENST00000584186 QRICH1Q2TAL8 776 aa15.89■□□□□ 0.13
CDK5RAP3-233ENST00000584186 CENPQQ7L2Z9 268 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-233ENST00000584186 MORC4Q8TE76 937 aa15.89■□□□□ 0.13
CDK5RAP3-233ENST00000584186 MAP4K1Q92918 833 aa15.89■□□□□ 0.13
CDK5RAP3-233ENST00000584186 MPHOSPH6Q99547 160 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-233ENST00000584186 JMJD4Q9H9V9 463 aa15.89■□□□□ 0.13
CDK5RAP3-233ENST00000584186 TMEM39AQ9NV64 488 aa15.89■□□□□ 0.13
CDK5RAP3-233ENST00000584186 RBM8AQ9Y5S9 174 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-233ENST00000584186 ABCB11O95342 1321 aa15.89■□□□□ 0.13
CDK5RAP3-233ENST00000584186 KLRF2D3W0D1 207 aa15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 CTAGE5O15320 804 aa15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 RAG1P15918 1043 aa15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 WTAPQ15007 396 aa15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 SART3Q15020 963 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 LRIT3Q3SXY7 679 aa15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 CXCL17Q6UXB2 119 aa15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 STOX1Q6ZVD7 989 aa15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 FBXO11Q86XK2 927 aa15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 TBC1D5Q92609 795 aa15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 WDR11Q9BZH6 1224 aa15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 SENP2Q9HC62 589 aa15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 ELP1O95163 1332 aa15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 LCTP09848 1927 aa15.88■□□□□ 0.13
CDK5RAP3-233ENST00000584186 A0A0U1RQG5 324 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-233ENST00000584186 ZEB2O60315 1214 aa15.87■□□□□ 0.13
CDK5RAP3-233ENST00000584186 ITGB8P26012 769 aa15.87■□□□□ 0.13
CDK5RAP3-233ENST00000584186 FAAP100Q0VG06 881 aa15.87■□□□□ 0.13
CDK5RAP3-233ENST00000584186 TMEM67Q5HYA8 995 aa15.87■□□□□ 0.13
CDK5RAP3-233ENST00000584186 ANKRD33Q7Z3H0 272 aa15.87■□□□□ 0.13
CDK5RAP3-233ENST00000584186 RGS22Q8NE09 1264 aa15.87■□□□□ 0.13
CDK5RAP3-233ENST00000584186 TOX2Q96NM4 488 aa15.87■□□□□ 0.13
CDK5RAP3-233ENST00000584186 MAD2L2Q9UI95 211 aa15.87■□□□□ 0.13
CDK5RAP3-233ENST00000584186 MRPL11Q9Y3B7 192 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-233ENST00000584186 LRRC37A2A6NM11 1700 aa15.87■□□□□ 0.13
CDK5RAP3-233ENST00000584186 LOC102724159A0A0B4J2E5 919 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 B4DLN1 442 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 ARVCFO00192 962 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 KIAA0355O15063 1070 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 MRPL12P52815 198 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 NKX3-2P78367 333 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 PWP2Q15269 919 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 SHHQ15465 462 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 DUSP28Q4G0W2 176 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 HOMER1Q86YM7 354 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 MCF2L2Q86YR7 1114 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 DNERQ8NFT8 737 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 ESYT1Q9BSJ8 1104 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 AMNQ9BXJ7 453 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 LTBP2Q14767 1821 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 MROH7Q68CQ1 1323 aa15.86■□□□□ 0.13
CDK5RAP3-233ENST00000584186 PALM3A6NDB9 673 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-233ENST00000584186 GRM4Q14833 912 aa15.85■□□□□ 0.13
CDK5RAP3-233ENST00000584186 PPP2R5BQ15173 497 aa15.85■□□□□ 0.13
CDK5RAP3-233ENST00000584186 C9orf50Q5SZB4 431 aa15.85■□□□□ 0.13
CDK5RAP3-233ENST00000584186 CATIPQ7Z7H3 387 aa15.85■□□□□ 0.13
CDK5RAP3-233ENST00000584186 SYTL5Q8TDW5 730 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-233ENST00000584186 TAAR1Q96RJ0 339 aa15.85■□□□□ 0.13
CDK5RAP3-233ENST00000584186 LSG1Q9H089 658 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-233ENST00000584186 ANO2Q9NQ90 1003 aa15.85■□□□□ 0.13
CDK5RAP3-233ENST00000584186 Q9Y3F1 56 aa15.85■□□□□ 0.13
CDK5RAP3-233ENST00000584186 ZBTB5O15062 677 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 TLR3O15455 904 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 CABYRO75952 493 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 CFBP00751 764 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 EDNRBP24530 442 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 CDK7P50613 346 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 ANTXR2P58335 489 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 PSMC6P62333 389 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 ITGA7Q13683 1181 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 Q7L0L9 218 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 MB21D2Q8IYB1 491 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 DEFB123Q8N688 67 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 OR6J1Q8NGC5 347 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 NSUN6Q8TEA1 469 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 SCFD2Q8WU76 684 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 RMDN3Q96TC7 470 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 COL20A1Q9P218 1284 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 PCDHA1Q9Y5I3 950 aa15.84■□□□□ 0.13
CDK5RAP3-233ENST00000584186 RBM47A0AV96 593 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 SLC27A2O14975 620 aa15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 PRC1O43663 620 aa15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 PPP1R11O60927 126 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 MYL3P08590 195 aa15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 TXNP10599 105 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 CPT1AP50416 773 aa15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 FPGSQ05932 587 aa15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 BMP2KLQ5H9B9 411 aa15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 ARHGEF16Q5VV41 709 aa15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 CASC1Q6TDU7 716 aa15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 NFXL1Q6ZNB6 911 aa15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 SEPT14Q6ZU15 432 aa15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 IGDCC4Q8TDY8 1250 aa15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 PIBF1Q8WXW3 757 aa15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 COPS5Q92905 334 aa15.83■□□□□ 0.12
CDK5RAP3-233ENST00000584186 PIGSQ96S52 555 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms