RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 TBC1D10CQ8IV04 446 aa17.82■□□□□ 0.44
SREBF1-222ENST00000583732 ZKSCAN3Q9BRR0 538 aa17.82■□□□□ 0.44
SREBF1-222ENST00000583732 IL23AQ9NPF7 189 aa17.82■□□□□ 0.44
SREBF1-222ENST00000583732 ADD3Q9UEY8 706 aaKnown RBP17.82■□□□□ 0.44
SREBF1-222ENST00000583732 ZMYM6O95789 1325 aa17.81■□□□□ 0.44
SREBF1-222ENST00000583732 NEDD4P46934 1319 aa17.81■□□□□ 0.44
SREBF1-222ENST00000583732 MYL3P08590 195 aa17.81■□□□□ 0.44
SREBF1-222ENST00000583732 AKNAD1Q5T1N1 836 aa17.81■□□□□ 0.44
SREBF1-222ENST00000583732 MFSD6Q6ZSS7 791 aa17.81■□□□□ 0.44
SREBF1-222ENST00000583732 USP38Q8NB14 1042 aa17.81■□□□□ 0.44
SREBF1-222ENST00000583732 MORC4Q8TE76 937 aa17.81■□□□□ 0.44
SREBF1-222ENST00000583732 WDR11Q9BZH6 1224 aa17.81■□□□□ 0.44
SREBF1-222ENST00000583732 TCP11L1Q9NUJ3 509 aa17.81■□□□□ 0.44
SREBF1-222ENST00000583732 CXXC1Q9P0U4 656 aaPredicted RBP17.81■□□□□ 0.44
SREBF1-222ENST00000583732 ZNF543Q08ER8 600 aa17.8■□□□□ 0.44
SREBF1-222ENST00000583732 DUSP28Q4G0W2 176 aa17.8■□□□□ 0.44
SREBF1-222ENST00000583732 RASIP1Q5U651 963 aa17.8■□□□□ 0.44
SREBF1-222ENST00000583732 RNF207Q6ZRF8 634 aa17.8■□□□□ 0.44
SREBF1-222ENST00000583732 OR6J1Q8NGC5 347 aa17.8■□□□□ 0.44
SREBF1-222ENST00000583732 PPP1R13LQ8WUF5 828 aa17.8■□□□□ 0.44
SREBF1-222ENST00000583732 CLEC4DQ8WXI8 215 aa17.8■□□□□ 0.44
SREBF1-222ENST00000583732 PPM1EQ8WY54 764 aa17.8■□□□□ 0.44
SREBF1-222ENST00000583732 NOC4LQ9BVI4 516 aaKnown RBP17.8■□□□□ 0.44
SREBF1-222ENST00000583732 CPVLQ9H3G5 476 aa17.8■□□□□ 0.44
SREBF1-222ENST00000583732 Q9Y3F1 56 aa17.8■□□□□ 0.44
SREBF1-222ENST00000583732 FGBP02675 491 aa17.79■□□□□ 0.44
SREBF1-222ENST00000583732 GOLGA8HP0CJ92 632 aa17.79■□□□□ 0.44
SREBF1-222ENST00000583732 PDE4DQ08499 809 aa17.79■□□□□ 0.44
SREBF1-222ENST00000583732 USH1GQ495M9 461 aa17.79■□□□□ 0.44
SREBF1-222ENST00000583732 OTOP2Q7RTS6 562 aa17.79■□□□□ 0.44
SREBF1-222ENST00000583732 SCLYQ96I15 445 aa17.79■□□□□ 0.44
SREBF1-222ENST00000583732 WNT8AQ9H1J5 351 aa17.79■□□□□ 0.44
SREBF1-222ENST00000583732 PRDM12Q9H4Q4 367 aa17.79■□□□□ 0.44
SREBF1-222ENST00000583732 SCN5AQ14524 2016 aa17.79■□□□□ 0.44
SREBF1-222ENST00000583732 RPS6P62753 249 aaKnown RBP17.78■□□□□ 0.44
SREBF1-222ENST00000583732 HERVK_113Q902F9 699 aa17.78■□□□□ 0.44
SREBF1-222ENST00000583732 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
SREBF1-222ENST00000583732 GAS2L1Q99501 681 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-222ENST00000583732 UBA5Q9GZZ9 404 aa17.78■□□□□ 0.44
SREBF1-222ENST00000583732 ALDH8A1Q9H2A2 487 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-222ENST00000583732 MTIF3Q9H2K0 278 aaKnown RBP17.78■□□□□ 0.44
SREBF1-222ENST00000583732 NKX2-4Q9H2Z4 354 aa17.78■□□□□ 0.44
SREBF1-222ENST00000583732 TRMT13Q9NUP7 481 aaKnown RBP17.78■□□□□ 0.44
SREBF1-222ENST00000583732 POLR3EQ9NVU0 708 aa17.78■□□□□ 0.44
SREBF1-222ENST00000583732 MSRAQ9UJ68 235 aa17.78■□□□□ 0.44
SREBF1-222ENST00000583732 PRUNE2Q8WUY3 3088 aa17.78■□□□□ 0.44
SREBF1-222ENST00000583732 MYH6P13533 1939 aa17.78■□□□□ 0.44
SREBF1-222ENST00000583732 ZBBXA8MT70 800 aa17.77■□□□□ 0.44
SREBF1-222ENST00000583732 CYP2C9P11712 490 aa17.77■□□□□ 0.44
SREBF1-222ENST00000583732 SDSP20132 328 aa17.77■□□□□ 0.44
SREBF1-222ENST00000583732 CPT1AP50416 773 aa17.77■□□□□ 0.44
SREBF1-222ENST00000583732 FAM47CQ5HY64 1035 aa17.77■□□□□ 0.44
SREBF1-222ENST00000583732 ESR2Q92731 530 aa17.77■□□□□ 0.44
SREBF1-222ENST00000583732 COPS5Q92905 334 aa17.77■□□□□ 0.44
SREBF1-222ENST00000583732 RNF41Q9H4P4 317 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-222ENST00000583732 PRDM6Q9NQX0 595 aa17.77■□□□□ 0.44
SREBF1-222ENST00000583732 CUL9Q8IWT3 2517 aa17.77■□□□□ 0.44
SREBF1-222ENST00000583732 TNKSO95271 1327 aa17.76■□□□□ 0.43
SREBF1-222ENST00000583732 WDR19Q8NEZ3 1342 aa17.76■□□□□ 0.43
SREBF1-222ENST00000583732 TANC1Q9C0D5 1861 aa17.76■□□□□ 0.43
SREBF1-222ENST00000583732 ZNF213O14771 459 aa17.76■□□□□ 0.43
SREBF1-222ENST00000583732 SNHG28P0DPA3 235 aa17.76■□□□□ 0.43
SREBF1-222ENST00000583732 MFAP1P55081 439 aaKnown RBP17.76■□□□□ 0.43
SREBF1-222ENST00000583732 PURAQ00577 322 aaKnown RBP17.76■□□□□ 0.43
SREBF1-222ENST00000583732 PPP2R5BQ15173 497 aa17.76■□□□□ 0.43
SREBF1-222ENST00000583732 RAB30Q15771 203 aa17.76■□□□□ 0.43
SREBF1-222ENST00000583732 CWC27Q6UX04 472 aaKnown RBP17.76■□□□□ 0.43
SREBF1-222ENST00000583732 TTC14Q96N46 770 aa17.76■□□□□ 0.43
SREBF1-222ENST00000583732 MPHOSPH6Q99547 160 aaKnown RBP17.76■□□□□ 0.43
SREBF1-222ENST00000583732 MTG1Q9BT17 334 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-222ENST00000583732 SEZ6LQ9BYH1 1024 aa17.76■□□□□ 0.43
SREBF1-222ENST00000583732 GPHNQ9NQX3 736 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-222ENST00000583732 YBX2Q9Y2T7 364 aaKnown RBP17.76■□□□□ 0.43
SREBF1-222ENST00000583732 LOC102724159A0A0B4J2E5 919 aa17.75■□□□□ 0.43
SREBF1-222ENST00000583732 RBM47A0AV96 593 aaKnown RBP17.75■□□□□ 0.43
SREBF1-222ENST00000583732 KDM4AO75164 1064 aa17.75■□□□□ 0.43
SREBF1-222ENST00000583732 PCP11498 1178 aaKnown RBP17.75■□□□□ 0.43
SREBF1-222ENST00000583732 RABGGTBP53611 331 aa17.75■□□□□ 0.43
SREBF1-222ENST00000583732 CHMP4BP1P59074 171 aa17.75■□□□□ 0.43
SREBF1-222ENST00000583732 PWP2Q15269 919 aaKnown RBP17.75■□□□□ 0.43
SREBF1-222ENST00000583732 CHD1LQ86WJ1 897 aa17.75■□□□□ 0.43
SREBF1-222ENST00000583732 SMC5Q8IY18 1101 aa17.75■□□□□ 0.43
SREBF1-222ENST00000583732 RWDD1Q9H446 243 aaPredicted RBP17.75■□□□□ 0.43
SREBF1-222ENST00000583732 DIAPH3Q9NSV4 1193 aa17.75■□□□□ 0.43
SREBF1-222ENST00000583732 SCN10AQ9Y5Y9 1956 aa17.75■□□□□ 0.43
SREBF1-222ENST00000583732 RAD50Q92878 1312 aa17.74■□□□□ 0.43
SREBF1-222ENST00000583732 B4E1Z4 1266 aa17.74■□□□□ 0.43
SREBF1-222ENST00000583732 IGFBP4P22692 258 aa17.74■□□□□ 0.43
SREBF1-222ENST00000583732 CDC37Q16543 378 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-222ENST00000583732 GPATCH4Q5T3I0 446 aaKnown RBP17.74■□□□□ 0.43
SREBF1-222ENST00000583732 DEFB128Q7Z7B8 93 aa17.74■□□□□ 0.43
SREBF1-222ENST00000583732 TICAM2Q86XR7 235 aa17.74■□□□□ 0.43
SREBF1-222ENST00000583732 PLEKHM2Q8IWE5 1019 aa17.74■□□□□ 0.43
SREBF1-222ENST00000583732 PNMA1Q8ND90 353 aa17.74■□□□□ 0.43
SREBF1-222ENST00000583732 SCFD2Q8WU76 684 aa17.74■□□□□ 0.43
SREBF1-222ENST00000583732 KAT14Q9H8E8 782 aa17.74■□□□□ 0.43
SREBF1-222ENST00000583732 PNMA2Q9UL42 364 aa17.74■□□□□ 0.43
SREBF1-222ENST00000583732 SLC4A7Q9Y6M7 1214 aa17.74■□□□□ 0.43
SREBF1-222ENST00000583732 DHX16O60231 1041 aaKnown RBP17.73■□□□□ 0.43
SREBF1-222ENST00000583732 ARIH2O95376 493 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms