RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 LAMB1P07942 1786 aa12.27□□□□□ -0.45
SS18-221ENST00000582448 A0A1B0GUL6 1792 aa12.26□□□□□ -0.45
SS18-221ENST00000582448 RNF225M0QZC1 329 aaPredicted RBP12.26□□□□□ -0.45
SS18-221ENST00000582448 ADCY3O60266 1144 aa12.26□□□□□ -0.45
SS18-221ENST00000582448 GSPT1P15170 499 aaKnown RBP12.26□□□□□ -0.45
SS18-221ENST00000582448 SDSP20132 328 aa12.26□□□□□ -0.45
SS18-221ENST00000582448 TYRO3Q06418 890 aa12.26□□□□□ -0.45
SS18-221ENST00000582448 NFIAQ12857 509 aa12.26□□□□□ -0.45
SS18-221ENST00000582448 CDC42EP5Q6NZY7 148 aa12.26□□□□□ -0.45
SS18-221ENST00000582448 AACSQ86V21 672 aa12.26□□□□□ -0.45
SS18-221ENST00000582448 CCDC97Q96F63 343 aaPredicted RBP12.26□□□□□ -0.45
SS18-221ENST00000582448 SLC30A3Q99726 388 aa12.26□□□□□ -0.45
SS18-221ENST00000582448 KCNH4Q9UQ05 1017 aa12.26□□□□□ -0.45
SS18-221ENST00000582448 SUGT1Q9Y2Z0 365 aa12.26□□□□□ -0.45
SS18-221ENST00000582448 GLRX3O76003 335 aaKnown RBP12.25□□□□□ -0.45
SS18-221ENST00000582448 SGPL1O95470 568 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 SLC5A1P13866 664 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 ELNP15502 786 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 HOXB4P17483 251 aaPredicted RBP12.25□□□□□ -0.45
SS18-221ENST00000582448 IL15P40933 162 aaPredicted RBP12.25□□□□□ -0.45
SS18-221ENST00000582448 FLT3LGP49771 235 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 MOGSQ13724 837 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 PUM3Q15397 648 aaKnown RBP12.25□□□□□ -0.45
SS18-221ENST00000582448 RTN1Q16799 776 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 ZNF468Q5VIY5 522 aaPredicted RBP12.25□□□□□ -0.45
SS18-221ENST00000582448 GPAT2Q6NUI2 795 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 ZSCAN29Q8IWY8 852 aaPredicted RBP12.25□□□□□ -0.45
SS18-221ENST00000582448 ZFPM1Q8IX07 1006 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 VGLL2Q8N8G2 317 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 WDR66Q8TBY9 1149 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 BRD7Q9NPI1 651 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 PICK1Q9NRD5 415 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 ECHDC1Q9NTX5 307 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 ZNF112Q9UJU3 913 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 PRR12Q9ULL5 1215 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 DAGLAQ9Y4D2 1042 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 ZHX2Q9Y6X8 837 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 TRIOBPQ9H2D6 2365 aa12.25□□□□□ -0.45
SS18-221ENST00000582448 CXCL11O14625 94 aa12.24□□□□□ -0.45
SS18-221ENST00000582448 TNPO2O14787 897 aaKnown RBP12.24□□□□□ -0.45
SS18-221ENST00000582448 REC8O95072 547 aa12.24□□□□□ -0.45
SS18-221ENST00000582448 ADH6P28332 368 aa12.24□□□□□ -0.45
SS18-221ENST00000582448 PRDX5P30044 214 aa12.24□□□□□ -0.45
SS18-221ENST00000582448 BECN1Q14457 450 aa12.24□□□□□ -0.45
SS18-221ENST00000582448 UBE2Q1Q7Z7E8 422 aa12.24□□□□□ -0.45
SS18-221ENST00000582448 ARAP2Q8WZ64 1704 aa12.24□□□□□ -0.45
SS18-221ENST00000582448 RILPL2Q969X0 211 aa12.24□□□□□ -0.45
SS18-221ENST00000582448 PRIMPOLQ96LW4 560 aa12.24□□□□□ -0.45
SS18-221ENST00000582448 ADGRA2Q96PE1 1338 aa12.24□□□□□ -0.45
SS18-221ENST00000582448 DEFB118Q96PH6 123 aa12.24□□□□□ -0.45
SS18-221ENST00000582448 SALL3Q9BXA9 1300 aa12.24□□□□□ -0.45
SS18-221ENST00000582448 C22orf23Q9BZE7 217 aa12.24□□□□□ -0.45
SS18-221ENST00000582448 AVENQ9NQS1 362 aaPredicted RBP12.24□□□□□ -0.45
SS18-221ENST00000582448 CIAO1O76071 339 aa12.23□□□□□ -0.45
SS18-221ENST00000582448 ATG7O95352 703 aa12.23□□□□□ -0.45
SS18-221ENST00000582448 GDF11O95390 407 aa12.23□□□□□ -0.45
SS18-221ENST00000582448 LDHBP07195 334 aaKnown RBP12.23□□□□□ -0.45
SS18-221ENST00000582448 FGFR2P21802 821 aa12.23□□□□□ -0.45
SS18-221ENST00000582448 RFX5P48382 616 aaPredicted RBP12.23□□□□□ -0.45
SS18-221ENST00000582448 NOL9Q5SY16 702 aaKnown RBP12.23□□□□□ -0.45
SS18-221ENST00000582448 FASTKD5Q7L8L6 764 aaKnown RBP12.23□□□□□ -0.45
SS18-221ENST00000582448 BTLAQ7Z6A9 289 aa12.23□□□□□ -0.45
SS18-221ENST00000582448 SMCR8Q8TEV9 937 aaPredicted RBP12.23□□□□□ -0.45
SS18-221ENST00000582448 LPIN2Q92539 896 aa12.23□□□□□ -0.45
SS18-221ENST00000582448 BTBD6Q96KE9 485 aa12.23□□□□□ -0.45
SS18-221ENST00000582448 TBC1D32Q96NH3 1257 aa12.23□□□□□ -0.45
SS18-221ENST00000582448 RPAP1Q9BWH6 1393 aaPredicted RBP12.22□□□□□ -0.45
SS18-221ENST00000582448 SZT2Q5T011 3432 aa12.22□□□□□ -0.45
SS18-221ENST00000582448 AK9Q5TCS8 1911 aa12.22□□□□□ -0.45
SS18-221ENST00000582448 EYA2O00167 538 aa12.22□□□□□ -0.45
SS18-221ENST00000582448 SOX1O00570 391 aaPredicted RBP12.22□□□□□ -0.45
SS18-221ENST00000582448 PTPRAP18433 802 aa12.22□□□□□ -0.45
SS18-221ENST00000582448 SCYL3Q8IZE3 742 aa12.22□□□□□ -0.45
SS18-221ENST00000582448 TMEM151AQ8N4L1 468 aa12.22□□□□□ -0.45
SS18-221ENST00000582448 BEND7Q8N7W2 519 aaPredicted RBP12.22□□□□□ -0.45
SS18-221ENST00000582448 PAWRQ96IZ0 340 aaKnown RBP12.22□□□□□ -0.45
SS18-221ENST00000582448 PRO3102Q9H379 93 aa12.22□□□□□ -0.45
SS18-221ENST00000582448 KLK14Q9P0G3 267 aa12.22□□□□□ -0.45
SS18-221ENST00000582448 AKAP2Q9Y2D5 859 aa12.22□□□□□ -0.45
SS18-221ENST00000582448 TRIM75PA6NK02 468 aa12.21□□□□□ -0.45
SS18-221ENST00000582448 PRMT3O60678 531 aa12.21□□□□□ -0.45
SS18-221ENST00000582448 TFCP2Q12800 502 aa12.21□□□□□ -0.45
SS18-221ENST00000582448 TNNI3KQ59H18 835 aa12.21□□□□□ -0.45
SS18-221ENST00000582448 TMEM164Q5U3C3 297 aa12.21□□□□□ -0.45
SS18-221ENST00000582448 TSHZ3Q63HK5 1081 aa12.21□□□□□ -0.45
SS18-221ENST00000582448 SYT9Q86SS6 491 aa12.21□□□□□ -0.45
SS18-221ENST00000582448 CCDC84Q86UT8 332 aaPredicted RBP12.21□□□□□ -0.45
SS18-221ENST00000582448 ANKRD13CQ8N6S4 541 aa12.21□□□□□ -0.45
SS18-221ENST00000582448 PBXIP1Q96AQ6 731 aa12.21□□□□□ -0.45
SS18-221ENST00000582448 GPR108Q9NPR9 543 aa12.21□□□□□ -0.45
SS18-221ENST00000582448 GNL3LQ9NVN8 582 aaKnown RBP12.21□□□□□ -0.45
SS18-221ENST00000582448 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.21□□□□□ -0.45
SS18-221ENST00000582448 DMGDHQ9UI17 866 aaKnown RBP12.21□□□□□ -0.45
SS18-221ENST00000582448 AFG3L2Q9Y4W6 797 aa12.21□□□□□ -0.45
SS18-221ENST00000582448 FPGT-TNNI3KV9GXZ4 949 aa12.21□□□□□ -0.45
SS18-221ENST00000582448 A0A0G2JLL6 359 aaPredicted RBP12.2□□□□□ -0.46
SS18-221ENST00000582448 PHF20L1A8MW92 1017 aa12.2□□□□□ -0.46
SS18-221ENST00000582448 HIP1O00291 1037 aa12.2□□□□□ -0.46
SS18-221ENST00000582448 PICALMQ13492 652 aa12.2□□□□□ -0.46
SS18-221ENST00000582448 OCLNQ16625 522 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms