RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 RBM43Q6ZSC3 357 aaKnown RBP10.54□□□□□ -0.72
SS18-220ENST00000582092 FASTKD5Q7L8L6 764 aaKnown RBP10.54□□□□□ -0.72
SS18-220ENST00000582092 GMCL1P1Q8NEA9 526 aa10.54□□□□□ -0.72
SS18-220ENST00000582092 CHURC1Q8WUH1 139 aa10.54□□□□□ -0.72
SS18-220ENST00000582092 ZNF296Q8WUU4 475 aaPredicted RBP10.54□□□□□ -0.72
SS18-220ENST00000582092 COA7Q96BR5 231 aa10.54□□□□□ -0.72
SS18-220ENST00000582092 NAP1L4Q99733 375 aaKnown RBP10.54□□□□□ -0.72
SS18-220ENST00000582092 MCOLN1Q9GZU1 580 aa10.54□□□□□ -0.72
SS18-220ENST00000582092 CSRNP2Q9H175 543 aa10.54□□□□□ -0.72
SS18-220ENST00000582092 JMJD4Q9H9V9 463 aa10.54□□□□□ -0.72
SS18-220ENST00000582092 KIAA1468Q9P260 1216 aa10.54□□□□□ -0.72
SS18-220ENST00000582092 BIN2Q9UBW5 565 aaPredicted RBP10.54□□□□□ -0.72
SS18-220ENST00000582092 FBXO2Q9UK22 296 aaPredicted RBP10.54□□□□□ -0.72
SS18-220ENST00000582092 CTDP1Q9Y5B0 961 aaPredicted RBP10.54□□□□□ -0.72
SS18-220ENST00000582092 MORC2Q9Y6X9 1032 aaPredicted RBP10.54□□□□□ -0.72
SS18-220ENST00000582092 FAM205CA6NFA0 338 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 CCDC85CA6NKD9 419 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 SMTNL1A8MU46 457 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 GOLGA6L6A8MZA4 724 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 TMEM232C9JQI7 657 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 IGF2BP3O00425 579 aaKnown RBP eCLIP10.53□□□□□ -0.72
SS18-220ENST00000582092 POLR2DO15514 142 aaKnown RBP10.53□□□□□ -0.72
SS18-220ENST00000582092 ASNSP08243 561 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 LONP1P36776 959 aaKnown RBP10.53□□□□□ -0.72
SS18-220ENST00000582092 INF2Q27J81 1249 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 SPECC1Q5M775 1068 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 JAKMIP3Q5VZ66 844 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 TTBK2Q6IQ55 1244 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 KRBA2Q6ZNG9 492 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 NEK8Q86SG6 692 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 DRC7Q8IY82 874 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 RASGRP4Q8TDF6 673 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 BRI3BPQ8WY22 251 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 TNFRSF25Q93038 417 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 GMCL1Q96IK5 515 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 FEZ1Q99689 392 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 FUCA2Q9BTY2 467 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 DNAJC25Q9H1X3 360 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 DNAJC18Q9H819 358 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 PSTPIP2Q9H939 334 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 AS3MTQ9HBK9 375 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 GINM1Q9NU53 330 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 CCDC39Q9UFE4 941 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 DACH1Q9UI36 760 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 MRVI1Q9Y6F6 885 aa10.53□□□□□ -0.72
SS18-220ENST00000582092 BAZ2BQ9UIF8 2168 aaKnown RBP10.53□□□□□ -0.72
SS18-220ENST00000582092 PHF20L1A8MW92 1017 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 USP17L10C9JJH3 530 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 CCNT1O60563 726 aaKnown RBP10.52□□□□□ -0.73
SS18-220ENST00000582092 UBA7P41226 1012 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 NLRP12P59046 1061 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 ATP2C1P98194 919 aaPredicted RBP10.52□□□□□ -0.73
SS18-220ENST00000582092 SP3Q02447 781 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 CRHR2Q13324 411 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 ORC2Q13416 577 aaPredicted RBP10.52□□□□□ -0.73
SS18-220ENST00000582092 TMEM266Q2M3C6 531 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 LETM2Q2VYF4 491 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 SYDE2Q5VT97 1194 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 ANKRD23Q86SG2 305 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 FBXO11Q86XK2 927 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 ELOA2Q8IYF1 753 aaPredicted RBP10.52□□□□□ -0.73
SS18-220ENST00000582092 PDILTQ8N807 584 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 IQUBQ8NA54 791 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 CNKSR2Q8WXI2 1034 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 SMARCE1Q969G3 411 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 PPP1R9BQ96SB3 815 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 AMNQ9BXJ7 453 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 RAB34Q9BZG1 259 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 RIC8AQ9NPQ8 531 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 KCNH4Q9UQ05 1017 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 HPSEQ9Y251 543 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 PCDHA1Q9Y5I3 950 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 ZHX2Q9Y6X8 837 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 PTPRFP10586 1907 aa10.52□□□□□ -0.73
SS18-220ENST00000582092 MYH4Q9Y623 1939 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 FAM237AA0A1B0GTK4 181 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 ADCY5O95622 1261 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 NDUFB10O96000 172 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 PTPRAP18433 802 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 CAP2P40123 477 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 STAT2P52630 851 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 NPY5RQ15761 445 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 CDC37Q16543 378 aaPredicted RBP10.51□□□□□ -0.73
SS18-220ENST00000582092 EARS2Q5JPH6 523 aaKnown RBP10.51□□□□□ -0.73
SS18-220ENST00000582092 SAMD1Q6SPF0 538 aaPredicted RBP10.51□□□□□ -0.73
SS18-220ENST00000582092 FAM160B2Q86V87 743 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 TBCKQ8TEA7 893 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 CCDC47Q96A33 483 aaKnown RBP10.51□□□□□ -0.73
SS18-220ENST00000582092 DHX58Q96C10 678 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 PTPN18Q99952 460 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 TRIM5Q9C035 493 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 EHMT1Q9H9B1 1298 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 CBX8Q9HC52 389 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 SERTAD1Q9UHV2 236 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 ZBTB21Q9ULJ3 1066 aa10.51□□□□□ -0.73
SS18-220ENST00000582092 PHIPQ8WWQ0 1821 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 BTBD19C9JJ37 291 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 BIN1O00499 593 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 NEMFO60524 1076 aa10.5□□□□□ -0.73
SS18-220ENST00000582092 TLR2O60603 784 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms