RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 VWA5AO00534 786 aa12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 FLOT1O75955 427 aa12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 DDIT3P35638 169 aa12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 SLC16A2P36021 539 aa12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 POTEEQ6S8J3 1075 aa12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 GADL1Q6ZQY3 521 aa12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ALYREFQ86V81 257 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 CMTR1Q8N1G2 835 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 WASF1Q92558 559 aa12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PHKBQ93100 1093 aa12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 RRP36Q96EU6 259 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 P2RX7Q99572 595 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 LRFN3Q9BTN0 628 aa12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ASCC2Q9H1I8 757 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 FBXO28Q9NVF7 368 aa12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PNMA3Q9UL41 463 aa12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ZNF536O15090 1300 aa12.86□□□□□ -0.35
CDK5RAP3-204ENST00000577664 SPDYE16A6NNV3 312 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-204ENST00000577664 RAD21O60216 631 aa12.85□□□□□ -0.35
CDK5RAP3-204ENST00000577664 JAK2O60674 1132 aa12.85□□□□□ -0.35
CDK5RAP3-204ENST00000577664 SAMD3Q8N6K7 520 aa12.85□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PARK7Q99497 189 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-204ENST00000577664 TANGO6Q9C0B7 1094 aa12.85□□□□□ -0.35
CDK5RAP3-204ENST00000577664 CPVLQ9H3G5 476 aa12.85□□□□□ -0.35
CDK5RAP3-204ENST00000577664 BARHL2Q9NY43 387 aa12.85□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ORC3Q9UBD5 711 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-204ENST00000577664 SMC3Q9UQE7 1217 aa12.85□□□□□ -0.35
CDK5RAP3-204ENST00000577664 MTMR7Q9Y216 660 aa12.85□□□□□ -0.35
CDK5RAP3-204ENST00000577664 KIF3AQ9Y496 699 aa12.85□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ZBED4O75132 1171 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ICAM1P05362 532 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 SCG2P13521 617 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 GJB2P29033 226 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 GCLCP48506 637 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 HERVK_113P62684 666 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 AKAP17AQ02040 695 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 GHRHRQ02643 423 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 LRRC26Q2I0M4 334 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 QRICH1Q2TAL8 776 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 CCDC82Q8N4S0 544 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 KIFC2Q96AC6 838 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PIGSQ96S52 555 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 AMNQ9BXJ7 453 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 SLC26A6Q9BXS9 759 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 RBPJLQ9UBG7 517 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ZNF214Q9UL59 606 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 RABGAP1Q9Y3P9 1069 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 DOCK3Q8IZD9 2030 aa12.84□□□□□ -0.35
CDK5RAP3-204ENST00000577664 BAZ2BQ9UIF8 2168 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 ESYT2A0FGR8 921 aa12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 PPP1R11O60927 126 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 HMGCRP04035 888 aa12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 PDCP20941 246 aa12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 IRX3P78415 501 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 CDC37Q16543 378 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 GALNT17Q6IS24 598 aa12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 PPP1R18Q6NYC8 613 aa12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 FBXO18Q8NFZ0 1043 aa12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 ATG4CQ96DT6 458 aa12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 LBHD1Q9BQE6 289 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 ZMYND12Q9H0C1 365 aa12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 VAT1LQ9HCJ6 419 aa12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 HMX1Q9NP08 348 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 MAP3K20Q9NYL2 800 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 MORF4L1Q9UBU8 362 aa12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 SEC63Q9UGP8 760 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-204ENST00000577664 DNAH12Q6ZR08 3092 aa12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 STXBP3O00186 592 aa12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 TNPO2O14787 897 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 CNMDO75829 334 aa12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 IKQ13123 557 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 TMEM132BQ14DG7 1078 aa12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 SHHQ15465 462 aa12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 TKFCQ3LXA3 575 aa12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 FBXO11Q86XK2 927 aa12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 PHF20Q9BVI0 1012 aa12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 GLT8D2Q9H1C3 349 aa12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 THEGQ9P2T0 379 aa12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 LTBP2Q14767 1821 aa12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 A0A0G2JMZ2 1700 aa12.82□□□□□ -0.36
CDK5RAP3-204ENST00000577664 HSP90AA1P07900 732 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 XBP1P17861 261 aa12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 COPB2P35606 906 aa12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 MRPS5P82675 430 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 NPY5RQ15761 445 aa12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 WWC2Q6AWC2 1192 aa12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 RIOX2Q8IUF8 465 aa12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 FAM184AQ8NB25 1140 aa12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 DAGLBQ8NCG7 672 aa12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 CCDC12Q8WUD4 166 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 DDX11Q96FC9 970 aa12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 ALG1Q9BT22 464 aa12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 TEX13BQ9BXU2 312 aa12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 BTBD7Q9P203 1132 aa12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 PCDHA1Q9Y5I3 950 aa12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 ABCB11O95342 1321 aa12.81□□□□□ -0.36
CDK5RAP3-204ENST00000577664 M0R2N6 131 aa12.8□□□□□ -0.36
CDK5RAP3-204ENST00000577664 PIK3CDO00329 1044 aa12.8□□□□□ -0.36
CDK5RAP3-204ENST00000577664 SLC25A27O95847 323 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms