RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 TAPT1Q6NXT6 567 aa15.54■□□□□ 0.08
ATP2A3-215ENST00000576957 CXCL17Q6UXB2 119 aa15.54■□□□□ 0.08
ATP2A3-215ENST00000576957 NSMFQ6X4W1 530 aa15.54■□□□□ 0.08
ATP2A3-215ENST00000576957 CHMP4CQ96CF2 233 aa15.54■□□□□ 0.08
ATP2A3-215ENST00000576957 GBP4Q96PP9 640 aa15.54■□□□□ 0.08
ATP2A3-215ENST00000576957 ADD3Q9UEY8 706 aaKnown RBP15.54■□□□□ 0.08
ATP2A3-215ENST00000576957 DYNC1LI2O43237 492 aaPredicted RBP15.53■□□□□ 0.08
ATP2A3-215ENST00000576957 PCP11498 1178 aaKnown RBP15.53■□□□□ 0.08
ATP2A3-215ENST00000576957 SNAP25P60880 206 aa15.53■□□□□ 0.08
ATP2A3-215ENST00000576957 ITGA7Q13683 1181 aa15.53■□□□□ 0.08
ATP2A3-215ENST00000576957 GRIN2CQ14957 1233 aa15.53■□□□□ 0.08
ATP2A3-215ENST00000576957 TIFAQ96CG3 184 aa15.53■□□□□ 0.08
ATP2A3-215ENST00000576957 TTC14Q96N46 770 aa15.53■□□□□ 0.08
ATP2A3-215ENST00000576957 TMEM47Q9BQJ4 181 aa15.53■□□□□ 0.08
ATP2A3-215ENST00000576957 PPP1R12CQ9BZL4 782 aa15.53■□□□□ 0.08
ATP2A3-215ENST00000576957 ZNF576Q9H609 170 aa15.53■□□□□ 0.08
ATP2A3-215ENST00000576957 LRRC37A2A6NM11 1700 aa15.53■□□□□ 0.08
ATP2A3-215ENST00000576957 HSPD1P10809 573 aaKnown RBP15.52■□□□□ 0.08
ATP2A3-215ENST00000576957 SYDE2Q5VT97 1194 aa15.52■□□□□ 0.08
ATP2A3-215ENST00000576957 ZNF365Q70YC5 407 aa15.52■□□□□ 0.08
ATP2A3-215ENST00000576957 RASGRP2Q7LDG7 609 aa15.52■□□□□ 0.08
ATP2A3-215ENST00000576957 FBXO16Q8IX29 292 aaPredicted RBP15.52■□□□□ 0.08
ATP2A3-215ENST00000576957 MTIF3Q9H2K0 278 aaKnown RBP15.52■□□□□ 0.08
ATP2A3-215ENST00000576957 HIPK3Q9H422 1215 aa15.52■□□□□ 0.08
ATP2A3-215ENST00000576957 IL23AQ9NPF7 189 aa15.52■□□□□ 0.08
ATP2A3-215ENST00000576957 PDGFCQ9NRA1 345 aa15.52■□□□□ 0.08
ATP2A3-215ENST00000576957 TOMM22Q9NS69 142 aa15.52■□□□□ 0.08
ATP2A3-215ENST00000576957 MTMR7Q9Y216 660 aa15.52■□□□□ 0.08
ATP2A3-215ENST00000576957 GRIN2DO15399 1336 aa15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 A0A0D9SFI3 127 aa15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 FSD2A1L4K1 749 aa15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 CYP2C18P33260 490 aa15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 SLC16A2P36021 539 aa15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 ALDH5A1P51649 535 aaPredicted RBP15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 BAATQ14032 418 aaPredicted RBP15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 DUSP28Q4G0W2 176 aa15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 RRP12Q5JTH9 1297 aaKnown RBP15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 TTBK2Q6IQ55 1244 aa15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 KIAA1211Q6ZU35 1233 aa15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 EEPD1Q7L9B9 569 aa15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 HERVK_113Q902F9 699 aa15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 FAM227BQ96M60 508 aa15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 PBX4Q9BYU1 374 aa15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 CUL9Q8IWT3 2517 aa15.51■□□□□ 0.07
ATP2A3-215ENST00000576957 PRUNE2Q8WUY3 3088 aa15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 RBM47A0AV96 593 aaKnown RBP15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 CDC45O75419 566 aa15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 FGBP02675 491 aa15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 ACRP10323 421 aa15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 PDHBP11177 359 aa15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 DDIT3P35638 169 aa15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 NT5C2P49902 561 aa15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 MRE11P49959 708 aa15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 SYMPKQ92797 1274 aaKnown RBP15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 MPHOSPH6Q99547 160 aaKnown RBP15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 LNPKQ9C0E8 428 aa15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 POLR3EQ9NVU0 708 aa15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 LCTP09848 1927 aa15.5■□□□□ 0.07
ATP2A3-215ENST00000576957 WDR19Q8NEZ3 1342 aa15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 PTPDC1A2A3K4 754 aa15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 NFIBO00712 420 aa15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 TRAK2O60296 914 aa15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 SNHG28P0DPA3 235 aa15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 CPT1AP50416 773 aa15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 RAB30Q15771 203 aa15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 AKNAD1Q5T1N1 836 aa15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 MFSD6Q6ZSS7 791 aa15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 RPUSD2Q8IZ73 545 aaKnown RBP15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 PURBQ96QR8 312 aaKnown RBP15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 NOC4LQ9BVI4 516 aaKnown RBP15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 WDR11Q9BZH6 1224 aa15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 MAF1Q9H063 256 aa15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 RNF41Q9H4P4 317 aaPredicted RBP15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 GPCPD1Q9NPB8 672 aa15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 MSRAQ9UJ68 235 aa15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 DDX49Q9Y6V7 483 aaKnown RBP15.49■□□□□ 0.07
ATP2A3-215ENST00000576957 FRMPD2Q68DX3 1309 aaPredicted RBP15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 CCDC171Q6TFL3 1326 aa15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 VCANP13611 3396 aa15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 NKRFO15226 690 aaKnown RBP eCLIP15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 B4GALT4O60513 344 aa15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 SUPT20HL2P0C7V6 817 aa15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 PBX2P40425 430 aa15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 ZNF543Q08ER8 600 aa15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 NMIQ13287 307 aaPredicted RBP15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 TMEM63BQ5T3F8 832 aa15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 GPATCH4Q5T3I0 446 aaKnown RBP15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 RNF207Q6ZRF8 634 aa15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 ZNF589Q86UQ0 364 aaPredicted RBP15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 DNERQ8NFT8 737 aa15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 CLEC4DQ8WXI8 215 aa15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 GAS2L1Q99501 681 aaPredicted RBP15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 TRPV6Q9H1D0 765 aa15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 ALDH8A1Q9H2A2 487 aaPredicted RBP15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 RTN4Q9NQC3 1192 aaKnown RBP15.48■□□□□ 0.07
ATP2A3-215ENST00000576957 GRXCR1A8MXD5 290 aa15.47■□□□□ 0.07
ATP2A3-215ENST00000576957 TRIM6-TRIM34B2RNG4 842 aa15.47■□□□□ 0.07
ATP2A3-215ENST00000576957 B4DLN1 442 aa15.47■□□□□ 0.07
ATP2A3-215ENST00000576957 GOLGA6L22H0YM25 854 aa15.47■□□□□ 0.07
ATP2A3-215ENST00000576957 PTGS1P23219 599 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms