RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 WDR11Q9BZH6 1224 aa10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 HIPK3Q9H422 1215 aa10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 LCTP09848 1927 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 CCDC171Q6TFL3 1326 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 ZEB2O60315 1214 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 CABYRO75952 493 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 MYL3P08590 195 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 CHMP4BP1P59074 171 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 USH1GQ495M9 461 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 BTNL9Q6UXG8 535 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 RNF207Q6ZRF8 634 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 MFSD6Q6ZSS7 791 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 SLC43A3Q8NBI5 491 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 CLEC4DQ8WXI8 215 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 SCLYQ96I15 445 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 UBA5Q9GZZ9 404 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 PRDM12Q9H4Q4 367 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 VTA1Q9NP79 307 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 IL23AQ9NPF7 189 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 PRDM6Q9NQX0 595 aa10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 TRMT13Q9NUP7 481 aaKnown RBP10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 ADD3Q9UEY8 706 aaKnown RBP10.13□□□□□ -0.79
CTDNEP1-203ENST00000570385 NEDD4P46934 1319 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 PRUNE2Q8WUY3 3088 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 TMEM265A0A087WTH1 108 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 RBAK-RBAKDNI3L0D1 243 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 FGBP02675 491 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 CYP2C9P11712 490 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 SDSP20132 328 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 RABGGTBP53611 331 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 ZNF543Q08ER8 600 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 DUSP28Q4G0W2 176 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 FAM47CQ5HY64 1035 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 AKNAD1Q5T1N1 836 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 RASIP1Q5U651 963 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 PSRC1Q6PGN9 363 aaPredicted RBP10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 CWC27Q6UX04 472 aaKnown RBP10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 OR6J1Q8NGC5 347 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 MORC4Q8TE76 937 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 COPS5Q92905 334 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 NOC4LQ9BVI4 516 aaKnown RBP10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 WNT8AQ9H1J5 351 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 NKX2-4Q9H2Z4 354 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 TCP11L1Q9NUJ3 509 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 EYSQ5T1H1 3165 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 LRRC37A2A6NM11 1700 aa10.12□□□□□ -0.79
CTDNEP1-203ENST00000570385 VCANP13611 3396 aa10.11□□□□□ -0.79
CTDNEP1-203ENST00000570385 IGHDP01880 384 aa10.11□□□□□ -0.79
CTDNEP1-203ENST00000570385 MYOGP15173 224 aa10.11□□□□□ -0.79
CTDNEP1-203ENST00000570385 RPS6P62753 249 aaKnown RBP10.11□□□□□ -0.79
CTDNEP1-203ENST00000570385 PDE4DQ08499 809 aa10.11□□□□□ -0.79
CTDNEP1-203ENST00000570385 CCDC85BQ15834 202 aaPredicted RBP10.11□□□□□ -0.79
CTDNEP1-203ENST00000570385 DEFB128Q7Z7B8 93 aa10.11□□□□□ -0.79
CTDNEP1-203ENST00000570385 HERVK_113Q902F9 699 aa10.11□□□□□ -0.79
CTDNEP1-203ENST00000570385 TBC1D5Q92609 795 aa10.11□□□□□ -0.79
CTDNEP1-203ENST00000570385 ALDH8A1Q9H2A2 487 aaPredicted RBP10.11□□□□□ -0.79
CTDNEP1-203ENST00000570385 MSRAQ9UJ68 235 aa10.11□□□□□ -0.79
CTDNEP1-203ENST00000570385 YBX2Q9Y2T7 364 aaKnown RBP10.11□□□□□ -0.79
CTDNEP1-203ENST00000570385 Q9Y3F1 56 aa10.11□□□□□ -0.79
CTDNEP1-203ENST00000570385 ZBBXA8MT70 800 aa10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 B4E1Z4 1266 aa10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 ZNF213O14771 459 aa10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 KDM4AO75164 1064 aa10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 IGFBP4P22692 258 aa10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 PURAQ00577 322 aaKnown RBP10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 ADGRE1Q14246 886 aa10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 PPP2R5BQ15173 497 aa10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 PLEKHM2Q8IWE5 1019 aa10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 ESR2Q92731 530 aa10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 VWCEQ96DN2 955 aa10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 TTC14Q96N46 770 aa10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 GAS2L1Q99501 681 aaPredicted RBP10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 VAT1LQ9HCJ6 419 aa10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 GPHNQ9NQX3 736 aaPredicted RBP10.1□□□□□ -0.79
CTDNEP1-203ENST00000570385 TNKSO95271 1327 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 RBM47A0AV96 593 aaKnown RBP10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 DHX16O60231 1041 aaKnown RBP10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 ARIH2O95376 493 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 SNHG28P0DPA3 235 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 TXNP10599 105 aaKnown RBP10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 CPT1AP50416 773 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 TTLL4Q14679 1199 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 CDC37Q16543 378 aaPredicted RBP10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 NBPF20Q3BBV1 942 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 SEPT14Q6ZU15 432 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 CHD1LQ86WJ1 897 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 SMC5Q8IY18 1101 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 MTG1Q9BT17 334 aaPredicted RBP10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 MTIF3Q9H2K0 278 aaKnown RBP10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 RWDD1Q9H446 243 aaPredicted RBP10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 RNF41Q9H4P4 317 aaPredicted RBP10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 SLC28A3Q9HAS3 691 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 DIAPH3Q9NSV4 1193 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 POLR3EQ9NVU0 708 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 SLC4A7Q9Y6M7 1214 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 NCOR1O75376 2440 aa10.09□□□□□ -0.79
CTDNEP1-203ENST00000570385 ZMYM6O95789 1325 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 WDR19Q8NEZ3 1342 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 SCN5AQ14524 2016 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 EDNRBP24530 442 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms