RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 PSMC6P62333 389 aa16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 RPS6P62753 249 aaKnown RBP16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 FPGSQ05932 587 aa16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 TTC22Q5TAA0 569 aa16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 NOL8Q76FK4 1167 aaKnown RBP16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 DGKHQ86XP1 1220 aa16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 PNMA1Q8ND90 353 aa16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 SLC17A8Q8NDX2 589 aa16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 TBC1D5Q92609 795 aa16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 RNF41Q9H4P4 317 aaPredicted RBP16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 VTA1Q9NP79 307 aa16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 ZSWIM5Q9P217 1185 aa16.26■□□□□ 0.19
GTF3C1-211ENST00000569653 RBM47A0AV96 593 aaKnown RBP16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 PTPDC1A2A3K4 754 aa16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 EDNRBP24530 442 aa16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 CALML3P27482 149 aa16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 MFAP1P55081 439 aaKnown RBP16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 SLC35G1Q2M3R5 365 aa16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 IQSEC1Q6DN90 963 aa16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 VWCEQ96DN2 955 aa16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 RNPC3Q96LT9 517 aaKnown RBP16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.25■□□□□ 0.194e-7■■■■□ 19.9
GTF3C1-211ENST00000569653 PPP1R12CQ9BZL4 782 aa16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 SPC25Q9HBM1 224 aa16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 COL20A1Q9P218 1284 aa16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 MYO9BQ13459 2157 aa16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 REV3LO60673 3130 aa16.25■□□□□ 0.19
GTF3C1-211ENST00000569653 TNKSO95271 1327 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 RBAK-RBAKDNI3L0D1 243 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 CSF2RAP15509 400 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 CYP2C18P33260 490 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 SMAD3P84022 425 aaKnown RBP16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 PTH1RQ03431 593 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 SEC23AQ15436 765 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 USH1GQ495M9 461 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 DUSP28Q4G0W2 176 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 MFSD5Q6N075 450 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 RNF207Q6ZRF8 634 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 KIAA1211Q6ZU35 1233 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 CYB5R4Q7L1T6 521 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 PPP1R13LQ8WUF5 828 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 COPS5Q92905 334 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 VTI1AQ96AJ9 217 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 ZSCAN10Q96SZ4 725 aaPredicted RBP16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 TRPV6Q9H1D0 765 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 SEMA6BQ9H3T3 888 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 VCANP13611 3396 aa16.24■□□□□ 0.19
GTF3C1-211ENST00000569653 ARIH2O95376 493 aa16.23■□□□□ 0.19
GTF3C1-211ENST00000569653 ACRP10323 421 aa16.23■□□□□ 0.19
GTF3C1-211ENST00000569653 ITGA7Q13683 1181 aa16.23■□□□□ 0.19
GTF3C1-211ENST00000569653 CDC37Q16543 378 aaPredicted RBP16.23■□□□□ 0.19
GTF3C1-211ENST00000569653 TMEM240Q5SV17 173 aa16.23■□□□□ 0.19
GTF3C1-211ENST00000569653 GPATCH4Q5T3I0 446 aaKnown RBP16.23■□□□□ 0.19
GTF3C1-211ENST00000569653 ZNF697Q5TEC3 545 aa16.23■□□□□ 0.19
GTF3C1-211ENST00000569653 RASIP1Q5U651 963 aa16.23■□□□□ 0.19
GTF3C1-211ENST00000569653 ADGRF4Q8IZF3 695 aa16.23■□□□□ 0.19
GTF3C1-211ENST00000569653 CDX2Q99626 313 aaPredicted RBP16.23■□□□□ 0.19
GTF3C1-211ENST00000569653 SENP2Q9HC62 589 aa16.23■□□□□ 0.19
GTF3C1-211ENST00000569653 Q9Y3F1 56 aa16.23■□□□□ 0.19
GTF3C1-211ENST00000569653 MROH7Q68CQ1 1323 aa16.22■□□□□ 0.19
GTF3C1-211ENST00000569653 HIP1O00291 1037 aa16.22■□□□□ 0.19
GTF3C1-211ENST00000569653 OPLAHO14841 1288 aa16.22■□□□□ 0.19
GTF3C1-211ENST00000569653 B4GALT4O60513 344 aa16.22■□□□□ 0.19
GTF3C1-211ENST00000569653 QRICH1Q2TAL8 776 aa16.22■□□□□ 0.19
GTF3C1-211ENST00000569653 STAG2Q8N3U4 1231 aa16.22■□□□□ 0.19
GTF3C1-211ENST00000569653 WDR11Q9BZH6 1224 aa16.22■□□□□ 0.19
GTF3C1-211ENST00000569653 AP5M1Q9H0R1 490 aa16.22■□□□□ 0.19
GTF3C1-211ENST00000569653 WNT8AQ9H1J5 351 aa16.22■□□□□ 0.19
GTF3C1-211ENST00000569653 JMJD4Q9H9V9 463 aa16.22■□□□□ 0.19
GTF3C1-211ENST00000569653 ADD3Q9UEY8 706 aaKnown RBP16.22■□□□□ 0.19
GTF3C1-211ENST00000569653 MYH7BA7E2Y1 1941 aa16.21■□□□□ 0.19
GTF3C1-211ENST00000569653 TET1Q8NFU7 2136 aa16.21■□□□□ 0.19
GTF3C1-211ENST00000569653 TANC1Q9C0D5 1861 aa16.21■□□□□ 0.19
GTF3C1-211ENST00000569653 GRXCR1A8MXD5 290 aa16.21■□□□□ 0.19
GTF3C1-211ENST00000569653 PPP1R11O60927 126 aaPredicted RBP16.21■□□□□ 0.19
GTF3C1-211ENST00000569653 IMMTQ16891 758 aaKnown RBP16.21■□□□□ 0.19
GTF3C1-211ENST00000569653 IQCA1Q86XH1 822 aa16.21■□□□□ 0.19
GTF3C1-211ENST00000569653 MYLIPQ8WY64 445 aa16.21■□□□□ 0.19
GTF3C1-211ENST00000569653 NOC4LQ9BVI4 516 aaKnown RBP16.21■□□□□ 0.19
GTF3C1-211ENST00000569653 KAT14Q9H8E8 782 aa16.21■□□□□ 0.19
GTF3C1-211ENST00000569653 CXXC1Q9P0U4 656 aaPredicted RBP16.21■□□□□ 0.19
GTF3C1-211ENST00000569653 TRIP12Q14669 1992 aaPredicted RBP16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 TRANK1O15050 2925 aa16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 LOC102724159A0A0B4J2E5 919 aa16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 CABYRO75952 493 aa16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 CYP21A2P08686 494 aa16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 CHMLP26374 656 aa16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 PBX2P40425 430 aa16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 PURAQ00577 322 aaKnown RBP16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 COL9A3Q14050 684 aaPredicted RBP16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 PWP2Q15269 919 aaKnown RBP16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 ASPRV1Q53RT3 343 aa16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 STOX1Q6ZVD7 989 aa16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 ZNF365Q70YC5 407 aa16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 SYTL5Q8TDW5 730 aaPredicted RBP16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 TAAR1Q96RJ0 339 aa16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 SPTBN5Q9NRC6 3674 aaKnown RBP16.2■□□□□ 0.18
GTF3C1-211ENST00000569653 PDE4DQ08499 809 aa16.19■□□□□ 0.18
GTF3C1-211ENST00000569653 CCDC62Q6P9F0 684 aa16.19■□□□□ 0.18
GTF3C1-211ENST00000569653 RGS22Q8NE09 1264 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms