RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 RBM5P52756 815 aaKnown RBP eCLIP7.6□□□□□ -1.19
LINC00556-201ENST00000569603 SEC13P55735 322 aa7.6□□□□□ -1.19
LINC00556-201ENST00000569603 NFIAQ12857 509 aa7.6□□□□□ -1.19
LINC00556-201ENST00000569603 MTX1Q13505 466 aa7.6□□□□□ -1.19
LINC00556-201ENST00000569603 CCINQ13939 588 aa7.6□□□□□ -1.19
LINC00556-201ENST00000569603 HIF1AQ16665 826 aa7.6□□□□□ -1.19
LINC00556-201ENST00000569603 RTN1Q16799 776 aa7.6□□□□□ -1.19
LINC00556-201ENST00000569603 DMRTC2Q8IXT2 367 aaPredicted RBP7.6□□□□□ -1.19
LINC00556-201ENST00000569603 FAM43AQ8N2R8 423 aa7.6□□□□□ -1.19
LINC00556-201ENST00000569603 ZNF384Q8TF68 577 aa7.6□□□□□ -1.19
LINC00556-201ENST00000569603 COPRSQ9NQ92 184 aa7.6□□□□□ -1.19
LINC00556-201ENST00000569603 PTPN22Q9Y2R2 807 aa7.6□□□□□ -1.19
LINC00556-201ENST00000569603 MAFBQ9Y5Q3 323 aaPredicted RBP7.6□□□□□ -1.19
LINC00556-201ENST00000569603 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.6□□□□□ -1.19
LINC00556-201ENST00000569603 GAKO14976 1311 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 PDS5AQ29RF7 1337 aaKnown RBP7.59□□□□□ -1.19
LINC00556-201ENST00000569603 MARCH6O60337 910 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 IFIT1P09914 478 aaKnown RBP7.59□□□□□ -1.19
LINC00556-201ENST00000569603 PRDX5P30044 214 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 RARSP54136 660 aaKnown RBP7.59□□□□□ -1.19
LINC00556-201ENST00000569603 RBM10P98175 930 aaKnown RBP7.59□□□□□ -1.19
LINC00556-201ENST00000569603 PLAURQ03405 335 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 KCNA1Q09470 495 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 CHAF1AQ13111 956 aaPredicted RBP7.59□□□□□ -1.19
LINC00556-201ENST00000569603 CRTC2Q53ET0 693 aaPredicted RBP7.59□□□□□ -1.19
LINC00556-201ENST00000569603 CAVIN4Q5BKX8 364 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 INTS3Q68E01 1043 aaKnown RBP7.59□□□□□ -1.19
LINC00556-201ENST00000569603 CDC42EP5Q6NZY7 148 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 CD99L2Q8TCZ2 262 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 GLMNQ92990 594 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 PNMA5Q96PV4 448 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 MEIS3Q99687 375 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 SSBP4Q9BWG4 385 aaPredicted RBP7.59□□□□□ -1.19
LINC00556-201ENST00000569603 EFCC1Q9HA90 598 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 ZCCHC17Q9NP64 241 aaKnown RBP7.59□□□□□ -1.19
LINC00556-201ENST00000569603 SMC4Q9NTJ3 1288 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 TFIP11Q9UBB9 837 aaKnown RBP7.59□□□□□ -1.19
LINC00556-201ENST00000569603 NOB1Q9ULX3 412 aaKnown RBP7.59□□□□□ -1.19
LINC00556-201ENST00000569603 TRIM17Q9Y577 477 aa7.59□□□□□ -1.19
LINC00556-201ENST00000569603 AK9Q5TCS8 1911 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 MAST3O60307 1309 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 SIPA1L1O43166 1804 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 CCL15-CCL14A0A0B4J2E2 113 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 ANKRD62A6NC57 917 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 BTBD19C9JJ37 291 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 RGS9O75916 674 aaPredicted RBP7.58□□□□□ -1.2
LINC00556-201ENST00000569603 BRD1O95696 1058 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 CTGFP29279 349 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 ADORA1P30542 326 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 PHKA1P46020 1223 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 GTF2A2P52657 109 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 NRG1Q02297 640 aaPredicted RBP7.58□□□□□ -1.2
LINC00556-201ENST00000569603 SP3Q02447 781 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 PPIL2Q13356 520 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 CCL15Q16663 113 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 NOL9Q5SY16 702 aaKnown RBP7.58□□□□□ -1.2
LINC00556-201ENST00000569603 GORABQ5T7V8 394 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 VPS37DQ86XT2 251 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 ERO1BQ86YB8 467 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 ZFPM1Q8IX07 1006 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 WDR66Q8TBY9 1149 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 FAM151AQ8WW52 585 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 ARHGAP45Q92619 1136 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 ZKSCAN4Q969J2 545 aaPredicted RBP7.58□□□□□ -1.2
LINC00556-201ENST00000569603 TP53INP1Q96A56 240 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 ERO1AQ96HE7 468 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 ZNF333Q96JL9 665 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 LPIN3Q9BQK8 851 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 PA2G4Q9UQ80 394 aaKnown RBP7.58□□□□□ -1.2
LINC00556-201ENST00000569603 LRRFIP2Q9Y608 721 aaKnown RBP7.58□□□□□ -1.2
LINC00556-201ENST00000569603 MGAMO43451 1857 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 CDK5RAP2Q96SN8 1893 aa7.58□□□□□ -1.2
LINC00556-201ENST00000569603 CCER2I3L3R5 266 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 TLR2O60603 784 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 UBTFL1P0CB47 393 aaPredicted RBP7.57□□□□□ -1.2
LINC00556-201ENST00000569603 SLC5A1P13866 664 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 CPB1P15086 417 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 INPP5BP32019 993 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 IL15P40933 162 aaPredicted RBP7.57□□□□□ -1.2
LINC00556-201ENST00000569603 TNNI2P48788 182 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 RASGRF1Q13972 1273 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 ATP2B3Q16720 1220 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 LCE3BQ5TA77 95 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 OTUD7BQ6GQQ9 843 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 FAM35AQ86V20 835 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 DRC1Q96MC2 740 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 WRNIP1Q96S55 665 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 IDI2Q9BXS1 227 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 ARHGAP39Q9C0H5 1083 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 KLK14Q9P0G3 267 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 ZFATQ9P243 1243 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 DOCK1Q14185 1865 aa7.57□□□□□ -1.2
LINC00556-201ENST00000569603 MYO5AQ9Y4I1 1855 aaKnown RBP7.56□□□□□ -1.2
LINC00556-201ENST00000569603 UNC80Q8N2C7 3258 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 ZBTB42B2RXF5 422 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 TPD52L2O43399 206 aaKnown RBP7.56□□□□□ -1.2
LINC00556-201ENST00000569603 WDHD1O75717 1129 aaPredicted RBP7.56□□□□□ -1.2
LINC00556-201ENST00000569603 PTMAP06454 111 aaKnown RBP7.56□□□□□ -1.2
LINC00556-201ENST00000569603 CETPP11597 493 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 TRIM27P14373 513 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms