RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 GOPCQ9HD26 462 aa14.19□□□□□ -0.14
VPS9D1-207ENST00000568691 MTUS1Q9ULD2 1270 aa14.19□□□□□ -0.14
VPS9D1-207ENST00000568691 DCHS1Q96JQ0 3298 aa14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 LINC01553A4QN01 128 aa14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 RAD21O60216 631 aa14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 ST18O60284 1047 aa14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 WDR5P61964 334 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 PURAQ00577 322 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 C8orf34Q49A92 452 aa14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 SLC9C2Q5TAH2 1124 aa14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 TMED8Q6PL24 325 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 FBXO16Q8IX29 292 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 PRPF38AQ8NAV1 312 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 KIF1BPQ96EK5 621 aa14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 OSBPL3Q9H4L5 887 aa14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 A1CFQ9NQ94 594 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 CACNA1HO95180 2353 aa14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 MYO15AQ9UKN7 3530 aa14.18□□□□□ -0.14
VPS9D1-207ENST00000568691 ZNF536O15090 1300 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 TANC1Q9C0D5 1861 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 USP17L12C9JPN9 530 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 USP17L21D6R901 530 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 F5H6K3 240 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 SURF6O75683 361 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 ACTN1P12814 892 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 RFC2P35250 354 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 IRS1P35568 1242 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 KLRC3Q07444 240 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 TCF15Q12870 199 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 COL19A1Q14993 1142 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 EEPD1Q7L9B9 569 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 CHST13Q8NET6 341 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 PURBQ96QR8 312 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 AP5M1Q9H0R1 490 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 EXOC6BQ9Y2D4 811 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 Q9Y3F1 56 aa14.17□□□□□ -0.14
VPS9D1-207ENST00000568691 SALL3Q9BXA9 1300 aa14.16□□□□□ -0.14
VPS9D1-207ENST00000568691 BAZ2AQ9UIF9 1905 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-207ENST00000568691 KIF28PB7ZC32 967 aa14.16□□□□□ -0.14
VPS9D1-207ENST00000568691 PITPNM1O00562 1244 aa14.16□□□□□ -0.14
VPS9D1-207ENST00000568691 EIF5BO60841 1220 aaKnown RBP14.16□□□□□ -0.14
VPS9D1-207ENST00000568691 KIFC2Q96AC6 838 aa14.16□□□□□ -0.14
VPS9D1-207ENST00000568691 FTOQ9C0B1 505 aaKnown RBP eCLIP14.16□□□□□ -0.14
VPS9D1-207ENST00000568691 HOMER2Q9NSB8 354 aa14.16□□□□□ -0.14
VPS9D1-207ENST00000568691 SCN10AQ9Y5Y9 1956 aa14.16□□□□□ -0.14
VPS9D1-207ENST00000568691 MYH8P13535 1937 aa14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 ZEB2O60315 1214 aa14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 BAIAP3O94812 1187 aa14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 SUPT20HL2P0C7V6 817 aa14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 OS9Q13438 667 aaPredicted RBP14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 NBPF20Q3BBV1 942 aa14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 IQSEC1Q6DN90 963 aa14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 PLEKHM2Q8IWE5 1019 aa14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 MORC4Q8TE76 937 aa14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 TGS1Q96RS0 853 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 C17orf80Q9BSJ5 609 aa14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 FBXO40Q9UH90 709 aa14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 RBM19Q9Y4C8 960 aaKnown RBP14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 LCTP09848 1927 aa14.15□□□□□ -0.14
VPS9D1-207ENST00000568691 IGKV6D-41A0A0C4DH26 115 aa14.14□□□□□ -0.15
VPS9D1-207ENST00000568691 ZBED4O75132 1171 aa14.14□□□□□ -0.15
VPS9D1-207ENST00000568691 MBD4O95243 580 aa14.14□□□□□ -0.15
VPS9D1-207ENST00000568691 GJB5O95377 273 aa14.14□□□□□ -0.15
VPS9D1-207ENST00000568691 RASA1P20936 1047 aa14.14□□□□□ -0.15
VPS9D1-207ENST00000568691 CTR9Q6PD62 1173 aa14.14□□□□□ -0.15
VPS9D1-207ENST00000568691 RHPN1Q8TCX5 695 aa14.14□□□□□ -0.15
VPS9D1-207ENST00000568691 DHX38Q92620 1227 aaKnown RBP14.14□□□□□ -0.15
VPS9D1-207ENST00000568691 ATP8A2Q9NTI2 1148 aa14.14□□□□□ -0.15
VPS9D1-207ENST00000568691 NYAP2Q9P242 653 aa14.14□□□□□ -0.15
VPS9D1-207ENST00000568691 MUTYHQ9UIF7 546 aa14.14□□□□□ -0.15
VPS9D1-207ENST00000568691 DMDP11532 3685 aa14.14□□□□□ -0.15
VPS9D1-207ENST00000568691 ASB14A6NK59 587 aa14.13□□□□□ -0.15
VPS9D1-207ENST00000568691 LTBRP36941 435 aa14.13□□□□□ -0.15
VPS9D1-207ENST00000568691 OAZ1P54368 228 aa14.13□□□□□ -0.15
VPS9D1-207ENST00000568691 DUSP28Q4G0W2 176 aa14.13□□□□□ -0.15
VPS9D1-207ENST00000568691 HERC4Q5GLZ8 1057 aaPredicted RBP14.13□□□□□ -0.15
VPS9D1-207ENST00000568691 TTC22Q5TAA0 569 aa14.13□□□□□ -0.15
VPS9D1-207ENST00000568691 ADHFE1Q8IWW8 467 aa14.13□□□□□ -0.15
VPS9D1-207ENST00000568691 RAD9AQ99638 391 aa14.13□□□□□ -0.15
VPS9D1-207ENST00000568691 FAM86C1Q9NVL1 165 aa14.13□□□□□ -0.15
VPS9D1-207ENST00000568691 SIP14410 1827 aa14.13□□□□□ -0.15
VPS9D1-207ENST00000568691 NBNO60934 754 aa14.12□□□□□ -0.15
VPS9D1-207ENST00000568691 MYL3P08590 195 aa14.12□□□□□ -0.15
VPS9D1-207ENST00000568691 MKRN4PQ13434 485 aaPredicted RBP14.12□□□□□ -0.15
VPS9D1-207ENST00000568691 PUS10Q3MIT2 529 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-207ENST00000568691 MUM1L1Q5H9M0 696 aa14.12□□□□□ -0.15
VPS9D1-207ENST00000568691 MFSD14AQ96MC6 490 aa14.12□□□□□ -0.15
VPS9D1-207ENST00000568691 ACAD9Q9H845 621 aa14.12□□□□□ -0.15
VPS9D1-207ENST00000568691 RNF146Q9NTX7 359 aa14.12□□□□□ -0.15
VPS9D1-207ENST00000568691 PRKAG3Q9UGI9 489 aa14.12□□□□□ -0.15
VPS9D1-207ENST00000568691 PTPRZ1P23471 2315 aaPredicted RBP14.12□□□□□ -0.15
VPS9D1-207ENST00000568691 MYO7AQ13402 2215 aa14.11□□□□□ -0.15
VPS9D1-207ENST00000568691 GOLIM4O00461 696 aa14.11□□□□□ -0.15
VPS9D1-207ENST00000568691 CXCL10P02778 98 aa14.11□□□□□ -0.15
VPS9D1-207ENST00000568691 MX1P20591 662 aa14.11□□□□□ -0.15
VPS9D1-207ENST00000568691 KCNJ6P48051 423 aa14.11□□□□□ -0.15
VPS9D1-207ENST00000568691 PDE1AP54750 535 aa14.11□□□□□ -0.15
VPS9D1-207ENST00000568691 TCEAL5Q5H9L2 206 aa14.11□□□□□ -0.15
VPS9D1-207ENST00000568691 TRAF7Q6Q0C0 670 aa14.11□□□□□ -0.15
VPS9D1-207ENST00000568691 KIAA1211Q6ZU35 1233 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms