RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 NKD1Q969G9 470 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 SHANK3Q9BYB0 1731 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 EHMT1Q9H9B1 1298 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 GMIPQ9P107 970 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 CRYBG1Q9Y4K1 1723 aa6.8□□□□□ -1.32
CAPN3-217ENST00000567817 YTHDC2Q9H6S0 1430 aaKnown RBP6.79□□□□□ -1.32
CAPN3-217ENST00000567817 H3BS24 57 aa6.79□□□□□ -1.32
CAPN3-217ENST00000567817 ZNF165P49910 485 aa6.79□□□□□ -1.32
CAPN3-217ENST00000567817 IRX6P78412 446 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-217ENST00000567817 TNK2Q07912 1038 aa6.79□□□□□ -1.32
CAPN3-217ENST00000567817 ZNF394Q53GI3 561 aa6.79□□□□□ -1.32
CAPN3-217ENST00000567817 SLC23A3Q6PIS1 610 aa6.79□□□□□ -1.32
CAPN3-217ENST00000567817 WAPLQ7Z5K2 1190 aa6.79□□□□□ -1.32
CAPN3-217ENST00000567817 PHACTR4Q8IZ21 702 aa6.79□□□□□ -1.32
CAPN3-217ENST00000567817 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-217ENST00000567817 PI4K2BQ8TCG2 481 aa6.79□□□□□ -1.32
CAPN3-217ENST00000567817 EAF1Q96JC9 268 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-217ENST00000567817 LMCD1Q9NZU5 365 aa6.79□□□□□ -1.32
CAPN3-217ENST00000567817 KIAA0232Q92628 1395 aa6.79□□□□□ -1.32
CAPN3-217ENST00000567817 SLC22A31A6NKX4 558 aa6.78□□□□□ -1.32
CAPN3-217ENST00000567817 TCERG1O14776 1098 aaKnown RBP6.78□□□□□ -1.32
CAPN3-217ENST00000567817 RNASE1P07998 156 aaKnown RBP6.78□□□□□ -1.32
CAPN3-217ENST00000567817 ITGB5P18084 799 aa6.78□□□□□ -1.32
CAPN3-217ENST00000567817 TNNI2P48788 182 aa6.78□□□□□ -1.32
CAPN3-217ENST00000567817 EVA1CP58658 441 aa6.78□□□□□ -1.32
CAPN3-217ENST00000567817 ZP2Q05996 745 aa6.78□□□□□ -1.32
CAPN3-217ENST00000567817 SLC15A2Q16348 729 aa6.78□□□□□ -1.32
CAPN3-217ENST00000567817 CC2D1BQ5T0F9 858 aaKnown RBP6.78□□□□□ -1.32
CAPN3-217ENST00000567817 Q96M66 194 aa6.78□□□□□ -1.32
CAPN3-217ENST00000567817 ASPNQ9BXN1 380 aa6.78□□□□□ -1.32
CAPN3-217ENST00000567817 RC3H2Q9HBD1 1191 aaKnown RBP6.78□□□□□ -1.32
CAPN3-217ENST00000567817 MBNL3Q9NUK0 354 aaKnown RBP6.78□□□□□ -1.32
CAPN3-217ENST00000567817 ADAMTS6Q9UKP5 1117 aa6.78□□□□□ -1.32
CAPN3-217ENST00000567817 KCNH3Q9ULD8 1083 aa6.78□□□□□ -1.32
CAPN3-217ENST00000567817 PCDHGB7Q9Y5F8 929 aa6.78□□□□□ -1.32
CAPN3-217ENST00000567817 CPDO75976 1380 aa6.78□□□□□ -1.32
CAPN3-217ENST00000567817 PEAK1Q9H792 1746 aa6.78□□□□□ -1.32
CAPN3-217ENST00000567817 MEIS3P2A8K0S8 358 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 RGS13O14921 159 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 RAG1P15918 1043 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 JUNBP17275 347 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-217ENST00000567817 PPP2R1AP30153 589 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 MCM4P33991 863 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 ANP32AP39687 249 aaKnown RBP6.77□□□□□ -1.33
CAPN3-217ENST00000567817 CLCQ05315 142 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 ARSHQ5FYA8 562 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 CDCP2Q5VXM1 449 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 OVOS1Q6IE37 1185 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 GK5Q6ZS86 529 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 DTWD2Q8NBA8 298 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 BAHD1Q8TBE0 780 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-217ENST00000567817 KREMEN1Q96MU8 473 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 KIF2CQ99661 725 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 TRIT1Q9H3H1 467 aaKnown RBP6.77□□□□□ -1.33
CAPN3-217ENST00000567817 ATP13A1Q9HD20 1204 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 STK26Q9P289 416 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 DDX41Q9UJV9 622 aaKnown RBP6.77□□□□□ -1.33
CAPN3-217ENST00000567817 PLEKHH1Q9ULM0 1364 aa6.77□□□□□ -1.33
CAPN3-217ENST00000567817 BIN1O00499 593 aa6.76□□□□□ -1.33
CAPN3-217ENST00000567817 PAX4O43316 350 aa6.76□□□□□ -1.33
CAPN3-217ENST00000567817 POLD1P28340 1107 aa6.76□□□□□ -1.33
CAPN3-217ENST00000567817 GBP1P32455 592 aa6.76□□□□□ -1.33
CAPN3-217ENST00000567817 PRELPP51888 382 aa6.76□□□□□ -1.33
CAPN3-217ENST00000567817 CHMP4BP1P59074 171 aa6.76□□□□□ -1.33
CAPN3-217ENST00000567817 RACK1P63244 317 aaKnown RBP6.76□□□□□ -1.33
CAPN3-217ENST00000567817 LRRFIP1Q32MZ4 808 aaKnown RBP6.76□□□□□ -1.33
CAPN3-217ENST00000567817 METTL16Q86W50 562 aaKnown RBP6.76□□□□□ -1.33
CAPN3-217ENST00000567817 KIAA1522Q9P206 1035 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-217ENST00000567817 NSD2O96028 1365 aa6.76□□□□□ -1.33
CAPN3-217ENST00000567817 RGPD8O14715 1765 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-217ENST00000567817 PHRF1Q9P1Y6 1649 aaKnown RBP6.76□□□□□ -1.33
CAPN3-217ENST00000567817 TULP4Q9NRJ4 1543 aa6.76□□□□□ -1.33
CAPN3-217ENST00000567817 CRB1P82279 1406 aa6.76□□□□□ -1.33
CAPN3-217ENST00000567817 ATP10DQ9P241 1426 aa6.76□□□□□ -1.33
CAPN3-217ENST00000567817 POLR3AO14802 1390 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-217ENST00000567817 UNCXA6NJT0 531 aa6.75□□□□□ -1.33
CAPN3-217ENST00000567817 RNF4P78317 190 aa6.75□□□□□ -1.33
CAPN3-217ENST00000567817 CNGB1Q14028 1251 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-217ENST00000567817 NLRC3Q7RTR2 1065 aa6.75□□□□□ -1.33
CAPN3-217ENST00000567817 TMPRSS7Q7RTY8 843 aa6.75□□□□□ -1.33
CAPN3-217ENST00000567817 ATG4DQ86TL0 474 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-217ENST00000567817 ZNF654Q8IZM8 581 aa6.75□□□□□ -1.33
CAPN3-217ENST00000567817 LRRN4CLQ8ND94 238 aa6.75□□□□□ -1.33
CAPN3-217ENST00000567817 TMEM40Q8WWA1 233 aa6.75□□□□□ -1.33
CAPN3-217ENST00000567817 UBE2FQ969M7 185 aa6.75□□□□□ -1.33
CAPN3-217ENST00000567817 GPR62Q9BZJ7 368 aa6.75□□□□□ -1.33
CAPN3-217ENST00000567817 CNNM2Q9H8M5 875 aa6.75□□□□□ -1.33
CAPN3-217ENST00000567817 C14orf93Q9H972 538 aaKnown RBP6.75□□□□□ -1.33
CAPN3-217ENST00000567817 CARS2Q9HA77 564 aaKnown RBP6.75□□□□□ -1.33
CAPN3-217ENST00000567817 ZSWIM5Q9P217 1185 aa6.75□□□□□ -1.33
CAPN3-217ENST00000567817 USP35Q9P2H5 1018 aa6.75□□□□□ -1.33
CAPN3-217ENST00000567817 SBF2Q86WG5 1849 aa6.75□□□□□ -1.33
CAPN3-217ENST00000567817 CENPJQ9HC77 1338 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-217ENST00000567817 LMO7Q8WWI1 1683 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 ADCY9O60503 1353 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 UBOX5O94941 541 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 SRFP11831 508 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 IMPDH2P12268 514 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 CCNFP41002 786 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 DDB1Q16531 1140 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms