RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 TFF2Q03403 129 aa15.86■□□□□ 0.13
COMMD4-214ENST00000566230 HDAC1Q13547 482 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-214ENST00000566230 KIAA1211Q6ZU35 1233 aa15.86■□□□□ 0.13
COMMD4-214ENST00000566230 MICALL1Q8N3F8 863 aa15.86■□□□□ 0.13
COMMD4-214ENST00000566230 NACAP1Q9BZK3 213 aa15.86■□□□□ 0.13
COMMD4-214ENST00000566230 RWDD1Q9H446 243 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-214ENST00000566230 VTA1Q9NP79 307 aa15.86■□□□□ 0.13
COMMD4-214ENST00000566230 TRMT13Q9NUP7 481 aaKnown RBP15.86■□□□□ 0.13
COMMD4-214ENST00000566230 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.86■□□□□ 0.13
COMMD4-214ENST00000566230 TRIP12Q14669 1992 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-214ENST00000566230 BRWD1Q9NSI6 2320 aa15.85■□□□□ 0.13
COMMD4-214ENST00000566230 ZBBXA8MT70 800 aa15.85■□□□□ 0.13
COMMD4-214ENST00000566230 RFXAPO00287 272 aa15.85■□□□□ 0.13
COMMD4-214ENST00000566230 FOXP2O15409 715 aa15.85■□□□□ 0.13
COMMD4-214ENST00000566230 ATP2A2P16615 1042 aaKnown RBP15.85■□□□□ 0.13
COMMD4-214ENST00000566230 DUSP28Q4G0W2 176 aa15.85■□□□□ 0.13
COMMD4-214ENST00000566230 NSMFQ6X4W1 530 aa15.85■□□□□ 0.13
COMMD4-214ENST00000566230 EXOC6Q8TAG9 804 aa15.85■□□□□ 0.13
COMMD4-214ENST00000566230 GPATCH3Q96I76 525 aa15.85■□□□□ 0.13
COMMD4-214ENST00000566230 NAPBQ9H115 298 aa15.85■□□□□ 0.13
COMMD4-214ENST00000566230 ICAM1P05362 532 aa15.84■□□□□ 0.13
COMMD4-214ENST00000566230 SLC3A2P08195 630 aaKnown RBP15.84■□□□□ 0.13
COMMD4-214ENST00000566230 POU3F3P20264 500 aaPredicted RBP15.84■□□□□ 0.13
COMMD4-214ENST00000566230 PURAQ00577 322 aaKnown RBP15.84■□□□□ 0.13
COMMD4-214ENST00000566230 CTDSPL2Q05D32 466 aa15.84■□□□□ 0.13
COMMD4-214ENST00000566230 BAATQ14032 418 aaPredicted RBP15.84■□□□□ 0.13
COMMD4-214ENST00000566230 ZMYM1Q5SVZ6 1142 aa15.84■□□□□ 0.13
COMMD4-214ENST00000566230 IL27Q8NEV9 243 aa15.84■□□□□ 0.13
COMMD4-214ENST00000566230 TSPYL2Q9H2G4 693 aaPredicted RBP15.84■□□□□ 0.13
COMMD4-214ENST00000566230 CCPG1Q9ULG6 757 aa15.84■□□□□ 0.13
COMMD4-214ENST00000566230 STX8Q9UNK0 236 aa15.84■□□□□ 0.13
COMMD4-214ENST00000566230 TNKSO95271 1327 aa15.84■□□□□ 0.13
COMMD4-214ENST00000566230 RBM47A0AV96 593 aaKnown RBP15.83■□□□□ 0.12
COMMD4-214ENST00000566230 EPOPA6NHQ4 379 aa15.83■□□□□ 0.12
COMMD4-214ENST00000566230 NOVP48745 357 aa15.83■□□□□ 0.12
COMMD4-214ENST00000566230 ALDH5A1P51649 535 aaPredicted RBP15.83■□□□□ 0.12
COMMD4-214ENST00000566230 KCNQ1P51787 676 aa15.83■□□□□ 0.12
COMMD4-214ENST00000566230 TTBK2Q6IQ55 1244 aa15.83■□□□□ 0.12
COMMD4-214ENST00000566230 DEFB128Q7Z7B8 93 aa15.83■□□□□ 0.12
COMMD4-214ENST00000566230 PPP1R13LQ8WUF5 828 aa15.83■□□□□ 0.12
COMMD4-214ENST00000566230 WDR11Q9BZH6 1224 aa15.83■□□□□ 0.12
COMMD4-214ENST00000566230 POLR3EQ9NVU0 708 aa15.83■□□□□ 0.12
COMMD4-214ENST00000566230 ZBTB47Q9UFB7 747 aaPredicted RBP15.83■□□□□ 0.12
COMMD4-214ENST00000566230 MTMR7Q9Y216 660 aa15.83■□□□□ 0.12
COMMD4-214ENST00000566230 MTCH2Q9Y6C9 303 aa15.83■□□□□ 0.12
COMMD4-214ENST00000566230 PTPRSQ13332 1948 aa15.83■□□□□ 0.12
COMMD4-214ENST00000566230 TSPY2A6NKD2 308 aa15.82■□□□□ 0.12
COMMD4-214ENST00000566230 NFIBO00712 420 aa15.82■□□□□ 0.12
COMMD4-214ENST00000566230 ERC2O15083 957 aa15.82■□□□□ 0.12
COMMD4-214ENST00000566230 ARHGEF15O94989 841 aa15.82■□□□□ 0.12
COMMD4-214ENST00000566230 CA3P07451 260 aa15.82■□□□□ 0.12
COMMD4-214ENST00000566230 PFKMP08237 780 aa15.82■□□□□ 0.12
COMMD4-214ENST00000566230 MYL3P08590 195 aa15.82■□□□□ 0.12
COMMD4-214ENST00000566230 SUPT20HL2P0C7V6 817 aa15.82■□□□□ 0.12
COMMD4-214ENST00000566230 SLC16A2P36021 539 aa15.82■□□□□ 0.12
COMMD4-214ENST00000566230 TMEM67Q5HYA8 995 aa15.82■□□□□ 0.12
COMMD4-214ENST00000566230 PI4K2BQ8TCG2 481 aa15.82■□□□□ 0.12
COMMD4-214ENST00000566230 RANBP17Q9H2T7 1088 aaKnown RBP15.82■□□□□ 0.12
COMMD4-214ENST00000566230 CERS4Q9HA82 394 aa15.82■□□□□ 0.12
COMMD4-214ENST00000566230 TANC1Q9C0D5 1861 aa15.82■□□□□ 0.12
COMMD4-214ENST00000566230 PLA2G5P39877 138 aa15.81■□□□□ 0.12
COMMD4-214ENST00000566230 LRRFIP1Q32MZ4 808 aaKnown RBP15.81■□□□□ 0.12
COMMD4-214ENST00000566230 NBPF20Q3BBV1 942 aa15.81■□□□□ 0.12
COMMD4-214ENST00000566230 PPP4R3BQ5MIZ7 849 aa15.81■□□□□ 0.12
COMMD4-214ENST00000566230 KRT40Q6A162 431 aa15.81■□□□□ 0.12
COMMD4-214ENST00000566230 BTNL9Q6UXG8 535 aa15.81■□□□□ 0.12
COMMD4-214ENST00000566230 OTUD7AQ8TE49 926 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-214ENST00000566230 MTG1Q9BT17 334 aaPredicted RBP15.81■□□□□ 0.12
COMMD4-214ENST00000566230 ADD3Q9UEY8 706 aaKnown RBP15.81■□□□□ 0.12
COMMD4-214ENST00000566230 TTC41PQ6P2S7 1318 aa15.8■□□□□ 0.12
COMMD4-214ENST00000566230 RANBP6O60518 1105 aaKnown RBP15.8■□□□□ 0.12
COMMD4-214ENST00000566230 CPT1AP50416 773 aa15.8■□□□□ 0.12
COMMD4-214ENST00000566230 TAP1Q03518 808 aa15.8■□□□□ 0.12
COMMD4-214ENST00000566230 AAK1Q2M2I8 961 aa15.8■□□□□ 0.12
COMMD4-214ENST00000566230 CCDC96Q2M329 555 aa15.8■□□□□ 0.12
COMMD4-214ENST00000566230 DCAF4Q8WV16 495 aa15.8■□□□□ 0.12
COMMD4-214ENST00000566230 CLEC4DQ8WXI8 215 aa15.8■□□□□ 0.12
COMMD4-214ENST00000566230 FSD1Q9BTV5 496 aa15.8■□□□□ 0.12
COMMD4-214ENST00000566230 LOC102724159A0A0B4J2E5 919 aa15.79■□□□□ 0.12
COMMD4-214ENST00000566230 ORC4O43929 436 aa15.79■□□□□ 0.12
COMMD4-214ENST00000566230 FGRP09769 529 aa15.79■□□□□ 0.12
COMMD4-214ENST00000566230 IQCF3P0C7M6 154 aa15.79■□□□□ 0.12
COMMD4-214ENST00000566230 PWP2Q15269 919 aaKnown RBP15.79■□□□□ 0.12
COMMD4-214ENST00000566230 SKIV2LQ15477 1246 aaKnown RBP15.79■□□□□ 0.12
COMMD4-214ENST00000566230 ANKRD45Q5TZF3 282 aa15.79■□□□□ 0.12
COMMD4-214ENST00000566230 SYDE2Q5VT97 1194 aa15.79■□□□□ 0.12
COMMD4-214ENST00000566230 SLC30A10Q6XR72 485 aa15.79■□□□□ 0.12
COMMD4-214ENST00000566230 OR6J1Q8NGC5 347 aa15.79■□□□□ 0.12
COMMD4-214ENST00000566230 PHOSPHO2Q8TCD6 241 aa15.79■□□□□ 0.12
COMMD4-214ENST00000566230 COPS5Q92905 334 aa15.79■□□□□ 0.12
COMMD4-214ENST00000566230 SLC9A7Q96T83 725 aa15.79■□□□□ 0.12
COMMD4-214ENST00000566230 ANAPC4Q9UJX5 808 aa15.79■□□□□ 0.12
COMMD4-214ENST00000566230 PTPDC1A2A3K4 754 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 A6NJR5 290 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 PITPNM1O00562 1244 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 GTPBP6O43824 516 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-214ENST00000566230 TLL1O43897 1013 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 ACTN1P12814 892 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 CALML3P27482 149 aa15.78■□□□□ 0.12
COMMD4-214ENST00000566230 RFC2P35250 354 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms