RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 ZNF543Q08ER8 600 aa22.16■■□□□ 1.14
ABCA3-204ENST00000566200 KIAA1211Q6ZU35 1233 aa22.16■■□□□ 1.14
ABCA3-204ENST00000566200 TTC14Q96N46 770 aa22.16■■□□□ 1.14
ABCA3-204ENST00000566200 NEDD4P46934 1319 aa22.15■■□□□ 1.14
ABCA3-204ENST00000566200 SDSP20132 328 aa22.15■■□□□ 1.14
ABCA3-204ENST00000566200 DUSP28Q4G0W2 176 aa22.15■■□□□ 1.14
ABCA3-204ENST00000566200 RILPL2Q969X0 211 aa22.15■■□□□ 1.14
ABCA3-204ENST00000566200 TRPV6Q9H1D0 765 aa22.15■■□□□ 1.14
ABCA3-204ENST00000566200 ADD3Q9UEY8 706 aaKnown RBP22.15■■□□□ 1.14
ABCA3-204ENST00000566200 RBM47A0AV96 593 aaKnown RBP22.14■■□□□ 1.13
ABCA3-204ENST00000566200 B4GALT4O60513 344 aa22.14■■□□□ 1.13
ABCA3-204ENST00000566200 B4GALNT3Q6L9W6 998 aa22.14■■□□□ 1.13
ABCA3-204ENST00000566200 MFSD6Q6ZSS7 791 aa22.14■■□□□ 1.13
ABCA3-204ENST00000566200 PLEKHM2Q8IWE5 1019 aa22.14■■□□□ 1.13
ABCA3-204ENST00000566200 TIFAQ96CG3 184 aa22.14■■□□□ 1.13
ABCA3-204ENST00000566200 NOC4LQ9BVI4 516 aaKnown RBP22.14■■□□□ 1.13
ABCA3-204ENST00000566200 PBX4Q9BYU1 374 aa22.14■■□□□ 1.13
ABCA3-204ENST00000566200 HIPK3Q9H422 1215 aa22.14■■□□□ 1.13
ABCA3-204ENST00000566200 ZNF576Q9H609 170 aa22.14■■□□□ 1.13
ABCA3-204ENST00000566200 IL23AQ9NPF7 189 aa22.14■■□□□ 1.13
ABCA3-204ENST00000566200 PTPDC1A2A3K4 754 aa22.13■■□□□ 1.13
ABCA3-204ENST00000566200 ZEB2O60315 1214 aa22.13■■□□□ 1.13
ABCA3-204ENST00000566200 IGHDP01880 384 aa22.13■■□□□ 1.13
ABCA3-204ENST00000566200 PCP11498 1178 aaKnown RBP22.13■■□□□ 1.13
ABCA3-204ENST00000566200 CALML3P27482 149 aa22.13■■□□□ 1.13
ABCA3-204ENST00000566200 PSRC1Q6PGN9 363 aaPredicted RBP22.13■■□□□ 1.13
ABCA3-204ENST00000566200 VWCEQ96DN2 955 aa22.13■■□□□ 1.13
ABCA3-204ENST00000566200 ZKSCAN3Q9BRR0 538 aa22.13■■□□□ 1.13
ABCA3-204ENST00000566200 WDR11Q9BZH6 1224 aa22.13■■□□□ 1.13
ABCA3-204ENST00000566200 WNT8AQ9H1J5 351 aa22.13■■□□□ 1.13
ABCA3-204ENST00000566200 CXXC1Q9P0U4 656 aaPredicted RBP22.13■■□□□ 1.13
ABCA3-204ENST00000566200 SPTBN5Q9NRC6 3674 aaKnown RBP22.12■■□□□ 1.13
ABCA3-204ENST00000566200 WDR19Q8NEZ3 1342 aa22.12■■□□□ 1.13
ABCA3-204ENST00000566200 LOC102724159A0A0B4J2E5 919 aa22.12■■□□□ 1.13
ABCA3-204ENST00000566200 RPS6P62753 249 aaKnown RBP22.12■■□□□ 1.13
ABCA3-204ENST00000566200 PWP2Q15269 919 aaKnown RBP22.12■■□□□ 1.13
ABCA3-204ENST00000566200 RNF207Q6ZRF8 634 aa22.12■■□□□ 1.13
ABCA3-204ENST00000566200 USP38Q8NB14 1042 aa22.12■■□□□ 1.13
ABCA3-204ENST00000566200 HERVK_113Q902F9 699 aa22.12■■□□□ 1.13
ABCA3-204ENST00000566200 CPVLQ9H3G5 476 aa22.12■■□□□ 1.13
ABCA3-204ENST00000566200 OSBPL3Q9H4L5 887 aa22.12■■□□□ 1.13
ABCA3-204ENST00000566200 CHD9Q3L8U1 2897 aa22.12■■□□□ 1.13
ABCA3-204ENST00000566200 GOLGA8HP0CJ92 632 aa22.11■■□□□ 1.13
ABCA3-204ENST00000566200 EDNRBP24530 442 aa22.11■■□□□ 1.13
ABCA3-204ENST00000566200 CCL23P55773 120 aa22.11■■□□□ 1.13
ABCA3-204ENST00000566200 PURAQ00577 322 aaKnown RBP22.11■■□□□ 1.13
ABCA3-204ENST00000566200 NUCB1Q02818 461 aa22.11■■□□□ 1.13
ABCA3-204ENST00000566200 CHD1LQ86WJ1 897 aa22.11■■□□□ 1.13
ABCA3-204ENST00000566200 SEZ6LQ9BYH1 1024 aa22.11■■□□□ 1.13
ABCA3-204ENST00000566200 ALDH8A1Q9H2A2 487 aaPredicted RBP22.1■■□□□ 1.13
ABCA3-204ENST00000566200 RNF41Q9H4P4 317 aaPredicted RBP22.1■■□□□ 1.13
ABCA3-204ENST00000566200 SCN10AQ9Y5Y9 1956 aa22.1■■□□□ 1.13
ABCA3-204ENST00000566200 ZNF213O14771 459 aa22.09■■□□□ 1.13
ABCA3-204ENST00000566200 AAMPQ13685 434 aa22.09■■□□□ 1.13
ABCA3-204ENST00000566200 DGKHQ86XP1 1220 aa22.09■■□□□ 1.13
ABCA3-204ENST00000566200 ESR2Q92731 530 aa22.09■■□□□ 1.13
ABCA3-204ENST00000566200 UBA5Q9GZZ9 404 aa22.09■■□□□ 1.13
ABCA3-204ENST00000566200 RWDD1Q9H446 243 aaPredicted RBP22.09■■□□□ 1.13
ABCA3-204ENST00000566200 PNMA2Q9UL42 364 aa22.09■■□□□ 1.13
ABCA3-204ENST00000566200 SCN5AQ14524 2016 aa22.08■■□□□ 1.13
ABCA3-204ENST00000566200 FGBP02675 491 aa22.08■■□□□ 1.13
ABCA3-204ENST00000566200 MFAP1P55081 439 aaKnown RBP22.08■■□□□ 1.13
ABCA3-204ENST00000566200 USH1GQ495M9 461 aa22.08■■□□□ 1.13
ABCA3-204ENST00000566200 GPATCH4Q5T3I0 446 aaKnown RBP22.08■■□□□ 1.13
ABCA3-204ENST00000566200 CWC27Q6UX04 472 aaKnown RBP22.08■■□□□ 1.13
ABCA3-204ENST00000566200 OTOP2Q7RTS6 562 aa22.08■■□□□ 1.13
ABCA3-204ENST00000566200 DNERQ8NFT8 737 aa22.08■■□□□ 1.13
ABCA3-204ENST00000566200 OR6J1Q8NGC5 347 aa22.08■■□□□ 1.13
ABCA3-204ENST00000566200 COPS5Q92905 334 aa22.08■■□□□ 1.13
ABCA3-204ENST00000566200 TRMT13Q9NUP7 481 aaKnown RBP22.08■■□□□ 1.13
ABCA3-204ENST00000566200 KDM4AO75164 1064 aa22.07■■□□□ 1.12
ABCA3-204ENST00000566200 MYL3P08590 195 aa22.07■■□□□ 1.12
ABCA3-204ENST00000566200 CYP2C9P11712 490 aa22.07■■□□□ 1.12
ABCA3-204ENST00000566200 CPT1AP50416 773 aa22.07■■□□□ 1.12
ABCA3-204ENST00000566200 PDE4DQ08499 809 aa22.07■■□□□ 1.12
ABCA3-204ENST00000566200 PNMA1Q8ND90 353 aa22.07■■□□□ 1.12
ABCA3-204ENST00000566200 PPP1R13LQ8WUF5 828 aa22.07■■□□□ 1.12
ABCA3-204ENST00000566200 TBC1D5Q92609 795 aa22.07■■□□□ 1.12
ABCA3-204ENST00000566200 ANKS1AQ92625 1134 aa22.07■■□□□ 1.12
ABCA3-204ENST00000566200 SCLYQ96I15 445 aa22.07■■□□□ 1.12
ABCA3-204ENST00000566200 PRDM12Q9H4Q4 367 aa22.07■■□□□ 1.12
ABCA3-204ENST00000566200 POLR3EQ9NVU0 708 aa22.07■■□□□ 1.12
ABCA3-204ENST00000566200 B4E1Z4 1266 aa22.06■■□□□ 1.12
ABCA3-204ENST00000566200 ARIH2O95376 493 aa22.06■■□□□ 1.12
ABCA3-204ENST00000566200 RGS22Q8NE09 1264 aa22.06■■□□□ 1.12
ABCA3-204ENST00000566200 EXOC6Q8TAG9 804 aa22.06■■□□□ 1.12
ABCA3-204ENST00000566200 YBX2Q9Y2T7 364 aaKnown RBP22.06■■□□□ 1.12
ABCA3-204ENST00000566200 MYH6P13533 1939 aa22.06■■□□□ 1.12
ABCA3-204ENST00000566200 TNKSO95271 1327 aa22.06■■□□□ 1.12
ABCA3-204ENST00000566200 TANC1Q9C0D5 1861 aa22.05■■□□□ 1.12
ABCA3-204ENST00000566200 A6NJR5 290 aa22.05■■□□□ 1.12
ABCA3-204ENST00000566200 PPP2R5BQ15173 497 aa22.05■■□□□ 1.12
ABCA3-204ENST00000566200 CDC37Q16543 378 aaPredicted RBP22.05■■□□□ 1.12
ABCA3-204ENST00000566200 ENAHQ8N8S7 591 aaPredicted RBP22.05■■□□□ 1.12
ABCA3-204ENST00000566200 SCFD2Q8WU76 684 aa22.05■■□□□ 1.12
ABCA3-204ENST00000566200 MTG1Q9BT17 334 aaPredicted RBP22.05■■□□□ 1.12
ABCA3-204ENST00000566200 IL25Q9H293 177 aa22.05■■□□□ 1.12
ABCA3-204ENST00000566200 NKX2-4Q9H2Z4 354 aa22.05■■□□□ 1.12
ABCA3-204ENST00000566200 DIAPH3Q9NSV4 1193 aa22.05■■□□□ 1.12
ABCA3-204ENST00000566200 ZSWIM5Q9P217 1185 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms