RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 OSBPP22059 807 aa34.83■■■■□ 3.17
CTCF-203ENST00000566078 LETM2Q2VYF4 491 aa34.83■■■■□ 3.17
CTCF-203ENST00000566078 TBC1D5Q92609 795 aa34.83■■■■□ 3.17
CTCF-203ENST00000566078 MS4A4AQ96JQ5 239 aa34.83■■■■□ 3.17
CTCF-203ENST00000566078 CCL15-CCL14A0A0B4J2E2 113 aa34.82■■■■□ 3.16
CTCF-203ENST00000566078 NFIBO00712 420 aa34.82■■■■□ 3.16
CTCF-203ENST00000566078 ATP2A1O14983 1001 aa34.82■■■■□ 3.16
CTCF-203ENST00000566078 CCL15Q16663 113 aa34.82■■■■□ 3.16
CTCF-203ENST00000566078 MUM1L1Q5H9M0 696 aa34.82■■■■□ 3.16
CTCF-203ENST00000566078 TEX13BQ9BXU2 312 aa34.82■■■■□ 3.16
CTCF-203ENST00000566078 FOSP01100 380 aaPredicted RBP34.81■■■■□ 3.16
CTCF-203ENST00000566078 HERVK_113P62684 666 aa34.81■■■■□ 3.16
CTCF-203ENST00000566078 PLS1Q14651 629 aa34.81■■■■□ 3.16
CTCF-203ENST00000566078 TRERF1Q96PN7 1200 aa34.81■■■■□ 3.16
CTCF-203ENST00000566078 CCNT1O60563 726 aaKnown RBP34.81■■■■□ 3.16
CTCF-203ENST00000566078 LBX2Q6XYB7 198 aa34.81■■■■□ 3.16
CTCF-203ENST00000566078 SAPCD2Q86UD0 394 aa34.81■■■■□ 3.16
CTCF-203ENST00000566078 MCF2L2Q86YR7 1114 aa34.81■■■■□ 3.16
CTCF-203ENST00000566078 MB21D1Q8N884 522 aa34.81■■■■□ 3.16
CTCF-203ENST00000566078 RNF146Q9NTX7 359 aa34.81■■■■□ 3.16
CTCF-203ENST00000566078 RIPK3Q9Y572 518 aa34.81■■■■□ 3.16
CTCF-203ENST00000566078 MRVI1Q9Y6F6 885 aa34.81■■■■□ 3.16
CTCF-203ENST00000566078 PTGDRQ13258 359 aa34.8■■■■□ 3.16
CTCF-203ENST00000566078 RASAL3Q86YV0 1011 aa34.8■■■■□ 3.16
CTCF-203ENST00000566078 MORC2Q9Y6X9 1032 aaPredicted RBP34.8■■■■□ 3.16
CTCF-203ENST00000566078 ZNF157P51786 506 aaPredicted RBP34.79■■■■□ 3.16
CTCF-203ENST00000566078 ATP2C1P98194 919 aaPredicted RBP34.79■■■■□ 3.16
CTCF-203ENST00000566078 ADALQ6DHV7 355 aa34.79■■■■□ 3.16
CTCF-203ENST00000566078 POTEEQ6S8J3 1075 aa34.79■■■■□ 3.16
CTCF-203ENST00000566078 FCHSD1Q86WN1 690 aa34.79■■■■□ 3.16
CTCF-203ENST00000566078 KRI1Q8N9T8 703 aaKnown RBP34.79■■■■□ 3.16
CTCF-203ENST00000566078 BRI3BPQ8WY22 251 aa34.79■■■■□ 3.16
CTCF-203ENST00000566078 STAT3P40763 770 aa34.78■■■■□ 3.16
CTCF-203ENST00000566078 HSD17B4P51659 736 aa34.78■■■■□ 3.16
CTCF-203ENST00000566078 FBXO2Q9UK22 296 aaPredicted RBP34.78■■■■□ 3.16
CTCF-203ENST00000566078 LCTP09848 1927 aa34.78■■■■□ 3.16
CTCF-203ENST00000566078 AXDND1Q5T1B0 1012 aaPredicted RBP34.77■■■■□ 3.16
CTCF-203ENST00000566078 BTBD7Q9P203 1132 aa34.77■■■■□ 3.16
CTCF-203ENST00000566078 PNMA3Q9UL41 463 aa34.77■■■■□ 3.16
CTCF-203ENST00000566078 TOMM70O94826 608 aa34.77■■■■□ 3.16
CTCF-203ENST00000566078 GHRHRQ02643 423 aa34.77■■■■□ 3.16
CTCF-203ENST00000566078 TKFCQ3LXA3 575 aa34.77■■■■□ 3.16
CTCF-203ENST00000566078 A0A1W2PQ27 194 aa34.76■■■■□ 3.15
CTCF-203ENST00000566078 A0A1W2PQ64 194 aa34.76■■■■□ 3.15
CTCF-203ENST00000566078 A0A1W2PQD8 194 aa34.76■■■■□ 3.15
CTCF-203ENST00000566078 EDIL3O43854 480 aa34.76■■■■□ 3.15
CTCF-203ENST00000566078 CUTAO60888 179 aa34.76■■■■□ 3.15
CTCF-203ENST00000566078 ORC2Q13416 577 aaPredicted RBP34.76■■■■□ 3.15
CTCF-203ENST00000566078 RGMBQ6NW40 437 aa34.76■■■■□ 3.15
CTCF-203ENST00000566078 CCAR1Q8IX12 1150 aaKnown RBP34.76■■■■□ 3.15
CTCF-203ENST00000566078 CLIC6Q96NY7 704 aa34.76■■■■□ 3.15
CTCF-203ENST00000566078 PAGR1Q9BTK6 254 aa34.76■■■■□ 3.15
CTCF-203ENST00000566078 TLL2Q9Y6L7 1015 aa34.76■■■■□ 3.15
CTCF-203ENST00000566078 BTBD19C9JJ37 291 aa34.75■■■■□ 3.15
CTCF-203ENST00000566078 PTPREP23469 700 aa34.75■■■■□ 3.15
CTCF-203ENST00000566078 SREBF1P36956 1147 aa34.75■■■■□ 3.15
CTCF-203ENST00000566078 C4orf32Q8N8J7 132 aa34.75■■■■□ 3.15
CTCF-203ENST00000566078 SLC45A1Q9Y2W3 748 aa34.75■■■■□ 3.15
CTCF-203ENST00000566078 SRPRBQ9Y5M8 271 aaKnown RBP34.75■■■■□ 3.15
CTCF-203ENST00000566078 PDHXO00330 501 aa34.74■■■■□ 3.15
CTCF-203ENST00000566078 NEMFO60524 1076 aa34.74■■■■□ 3.15
CTCF-203ENST00000566078 PEX10O60683 326 aa34.74■■■■□ 3.15
CTCF-203ENST00000566078 TDP2O95551 362 aa34.74■■■■□ 3.15
CTCF-203ENST00000566078 LIG1P18858 919 aa34.74■■■■□ 3.15
CTCF-203ENST00000566078 ARHGAP4P98171 946 aa34.74■■■■□ 3.15
CTCF-203ENST00000566078 CAVIN1Q6NZI2 390 aaKnown RBP34.74■■■■□ 3.15
CTCF-203ENST00000566078 ANKRD23Q86SG2 305 aa34.74■■■■□ 3.15
CTCF-203ENST00000566078 EHMT1Q9H9B1 1298 aa34.74■■■■□ 3.15
CTCF-203ENST00000566078 SAMD3Q8N6K7 520 aa34.73■■■■□ 3.15
CTCF-203ENST00000566078 FSIP1Q8NA03 581 aa34.73■■■■□ 3.15
CTCF-203ENST00000566078 MRPS27Q92552 414 aaKnown RBP34.73■■■■□ 3.15
CTCF-203ENST00000566078 NAP1L4Q99733 375 aaKnown RBP34.73■■■■□ 3.15
CTCF-203ENST00000566078 MAP3K20Q9NYL2 800 aaKnown RBP34.73■■■■□ 3.15
CTCF-203ENST00000566078 CNMDO75829 334 aa34.73■■■■□ 3.15
CTCF-203ENST00000566078 GRIN1Q05586 938 aa34.73■■■■□ 3.15
CTCF-203ENST00000566078 NSMFQ6X4W1 530 aa34.73■■■■□ 3.15
CTCF-203ENST00000566078 RNF207Q6ZRF8 634 aa34.73■■■■□ 3.15
CTCF-203ENST00000566078 CRYGNQ8WXF5 182 aa34.73■■■■□ 3.15
CTCF-203ENST00000566078 FERMT2Q96AC1 680 aa34.73■■■■□ 3.15
CTCF-203ENST00000566078 TMEM60Q9H2L4 133 aa34.73■■■■□ 3.15
CTCF-203ENST00000566078 GOLPH3LQ9H4A5 285 aa34.73■■■■□ 3.15
CTCF-203ENST00000566078 ACAD9Q9H845 621 aa34.73■■■■□ 3.15
CTCF-203ENST00000566078 USP11P51784 963 aa34.72■■■■□ 3.15
CTCF-203ENST00000566078 PPP4R3AQ6IN85 833 aa34.72■■■■□ 3.15
CTCF-203ENST00000566078 SLC30A10Q6XR72 485 aa34.72■■■■□ 3.15
CTCF-203ENST00000566078 SPATC1LQ9H0A9 340 aa34.72■■■■□ 3.15
CTCF-203ENST00000566078 ABT1Q9ULW3 272 aaKnown RBP34.72■■■■□ 3.15
CTCF-203ENST00000566078 CYP2C8P10632 490 aa34.71■■■■□ 3.15
CTCF-203ENST00000566078 GCFC2P16383 781 aaKnown RBP34.71■■■■□ 3.15
CTCF-203ENST00000566078 RPS6P62753 249 aaKnown RBP34.71■■■■□ 3.15
CTCF-203ENST00000566078 CCDC73Q6ZRK6 1079 aa34.71■■■■□ 3.15
CTCF-203ENST00000566078 POTEDQ86YR6 584 aa34.71■■■■□ 3.15
CTCF-203ENST00000566078 RIOX2Q8IUF8 465 aa34.71■■■■□ 3.15
CTCF-203ENST00000566078 COL20A1Q9P218 1284 aa34.71■■■■□ 3.15
CTCF-203ENST00000566078 LAD1O00515 517 aa34.7■■■■□ 3.15
CTCF-203ENST00000566078 SLC37A4O43826 429 aa34.7■■■■□ 3.15
CTCF-203ENST00000566078 ARL6IP4Q66PJ3 421 aaKnown RBP34.7■■■■□ 3.15
CTCF-203ENST00000566078 SYTL5Q8TDW5 730 aaPredicted RBP34.7■■■■□ 3.15
CTCF-203ENST00000566078 TMEM88BA6NKF7 163 aa34.7■■■■□ 3.14
CTCF-203ENST00000566078 SLC10A3P09131 477 aa34.7■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms