RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 PHF24Q9UPV7 400 aa23.05■■□□□ 1.28
CMTM3-211ENST00000565922 SLC12A7Q9Y666 1083 aa23.05■■□□□ 1.28
CMTM3-211ENST00000565922 KIAA1217Q5T5P2 1943 aa23.05■■□□□ 1.28
CMTM3-211ENST00000565922 TNFAIP2Q03169 654 aa23.04■■□□□ 1.28
CMTM3-211ENST00000565922 LRRC26Q2I0M4 334 aa23.04■■□□□ 1.28
CMTM3-211ENST00000565922 SYNE3Q6ZMZ3 975 aa23.04■■□□□ 1.28
CMTM3-211ENST00000565922 DHX32Q7L7V1 743 aaKnown RBP23.04■■□□□ 1.28
CMTM3-211ENST00000565922 SGMS1Q86VZ5 419 aa23.04■■□□□ 1.28
CMTM3-211ENST00000565922 SAMD3Q8N6K7 520 aa23.04■■□□□ 1.28
CMTM3-211ENST00000565922 PCSK9Q8NBP7 692 aaKnown RBP23.04■■□□□ 1.28
CMTM3-211ENST00000565922 MAP3K20Q9NYL2 800 aaKnown RBP23.04■■□□□ 1.28
CMTM3-211ENST00000565922 PNMA6FA0A0J9YX94 578 aa23.03■■□□□ 1.28
CMTM3-211ENST00000565922 MOXD2PA6NHM9 499 aa23.03■■□□□ 1.28
CMTM3-211ENST00000565922 CST5P28325 142 aaPredicted RBP23.03■■□□□ 1.28
CMTM3-211ENST00000565922 PDE4DQ08499 809 aa23.03■■□□□ 1.28
CMTM3-211ENST00000565922 IQSEC1Q6DN90 963 aa23.03■■□□□ 1.28
CMTM3-211ENST00000565922 NOL8Q76FK4 1167 aaKnown RBP23.03■■□□□ 1.28
CMTM3-211ENST00000565922 FBXO16Q8IX29 292 aaPredicted RBP23.03■■□□□ 1.28
CMTM3-211ENST00000565922 LENG1Q96BZ8 264 aaPredicted RBP23.03■■□□□ 1.28
CMTM3-211ENST00000565922 PURBQ96QR8 312 aaKnown RBP23.03■■□□□ 1.28
CMTM3-211ENST00000565922 SPZ1Q9BXG8 430 aa23.03■■□□□ 1.28
CMTM3-211ENST00000565922 UPF3AQ9H1J1 476 aaKnown RBP23.03■■□□□ 1.28
CMTM3-211ENST00000565922 PCDHA1Q9Y5I3 950 aa23.03■■□□□ 1.28
CMTM3-211ENST00000565922 C6orf222P0C671 652 aaPredicted RBP23.02■■□□□ 1.28
CMTM3-211ENST00000565922 HSPA4P34932 840 aa23.02■■□□□ 1.28
CMTM3-211ENST00000565922 ADCYAP1R1P41586 468 aa23.02■■□□□ 1.28
CMTM3-211ENST00000565922 GJA9P57773 515 aa23.02■■□□□ 1.28
CMTM3-211ENST00000565922 RASEFQ8IZ41 740 aa23.02■■□□□ 1.28
CMTM3-211ENST00000565922 KLHDC9Q8NEP7 349 aa23.02■■□□□ 1.28
CMTM3-211ENST00000565922 PIGSQ96S52 555 aa23.02■■□□□ 1.28
CMTM3-211ENST00000565922 MYL10Q9BUA6 226 aa23.02■■□□□ 1.28
CMTM3-211ENST00000565922 GPHNQ9NQX3 736 aaPredicted RBP23.02■■□□□ 1.28
CMTM3-211ENST00000565922 SEC63Q9UGP8 760 aaKnown RBP23.02■■□□□ 1.28
CMTM3-211ENST00000565922 CYTH3O43739 400 aa23.01■■□□□ 1.27
CMTM3-211ENST00000565922 CFBP00751 764 aa23.01■■□□□ 1.27
CMTM3-211ENST00000565922 EDNRBP24530 442 aa23.01■■□□□ 1.27
CMTM3-211ENST00000565922 ATN1P54259 1190 aaPredicted RBP23.01■■□□□ 1.27
CMTM3-211ENST00000565922 C1orf53Q5VUE5 145 aa23.01■■□□□ 1.27
CMTM3-211ENST00000565922 SLC39A5Q6ZMH5 540 aa23.01■■□□□ 1.27
CMTM3-211ENST00000565922 EEPD1Q7L9B9 569 aa23.01■■□□□ 1.27
CMTM3-211ENST00000565922 NSUN6Q8TEA1 469 aaKnown RBP23.01■■□□□ 1.27
CMTM3-211ENST00000565922 KCNB2Q92953 911 aa23.01■■□□□ 1.27
CMTM3-211ENST00000565922 RRP36Q96EU6 259 aaKnown RBP23.01■■□□□ 1.27
CMTM3-211ENST00000565922 LRRC2Q9BYS8 371 aa23.01■■□□□ 1.27
CMTM3-211ENST00000565922 Q9Y3F1 56 aa23.01■■□□□ 1.27
CMTM3-211ENST00000565922 GHRHRQ02643 423 aa23■■□□□ 1.27
CMTM3-211ENST00000565922 SNX17Q15036 470 aa23■■□□□ 1.27
CMTM3-211ENST00000565922 ADCK5Q3MIX3 580 aa23■■□□□ 1.27
CMTM3-211ENST00000565922 TAPT1Q6NXT6 567 aa23■■□□□ 1.27
CMTM3-211ENST00000565922 SYTL5Q8TDW5 730 aaPredicted RBP23■■□□□ 1.27
CMTM3-211ENST00000565922 FERMT2Q96AC1 680 aa23■■□□□ 1.27
CMTM3-211ENST00000565922 IWS1Q96ST2 819 aa23■■□□□ 1.27
CMTM3-211ENST00000565922 AP5M1Q9H0R1 490 aa23■■□□□ 1.27
CMTM3-211ENST00000565922 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.99■■□□□ 1.27
CMTM3-211ENST00000565922 A0A1W2PQ45 241 aaPredicted RBP22.99■■□□□ 1.27
CMTM3-211ENST00000565922 A0A1W2PQY0 241 aa22.99■■□□□ 1.27
CMTM3-211ENST00000565922 ADCY6O43306 1168 aa22.99■■□□□ 1.27
CMTM3-211ENST00000565922 PPP1R11O60927 126 aaPredicted RBP22.99■■□□□ 1.27
CMTM3-211ENST00000565922 HSD17B4P51659 736 aa22.99■■□□□ 1.27
CMTM3-211ENST00000565922 ACLYP53396 1101 aa22.99■■□□□ 1.27
CMTM3-211ENST00000565922 RTP1P59025 263 aa22.99■■□□□ 1.27
CMTM3-211ENST00000565922 NKX3-2P78367 333 aa22.99■■□□□ 1.27
CMTM3-211ENST00000565922 FGD1P98174 961 aa22.99■■□□□ 1.27
CMTM3-211ENST00000565922 EXOSC10Q01780 885 aaKnown RBP22.99■■□□□ 1.27
CMTM3-211ENST00000565922 TLK2Q86UE8 772 aa22.99■■□□□ 1.27
CMTM3-211ENST00000565922 MICU3Q86XE3 530 aa22.99■■□□□ 1.27
CMTM3-211ENST00000565922 GLT1D1Q96MS3 346 aa22.99■■□□□ 1.27
CMTM3-211ENST00000565922 RMDN3Q96TC7 470 aa22.99■■□□□ 1.27
CMTM3-211ENST00000565922 RBM28Q9NW13 759 aaKnown RBP22.99■■□□□ 1.27
CMTM3-211ENST00000565922 PRKAG2Q9UGJ0 569 aa22.99■■□□□ 1.27
CMTM3-211ENST00000565922 GNEQ9Y223 722 aaKnown RBP22.99■■□□□ 1.27
CMTM3-211ENST00000565922 ZEB2O60315 1214 aa22.98■■□□□ 1.27
CMTM3-211ENST00000565922 PSMA5P28066 241 aa22.98■■□□□ 1.27
CMTM3-211ENST00000565922 COL9A3Q14050 684 aaPredicted RBP22.98■■□□□ 1.27
CMTM3-211ENST00000565922 KCNA10Q16322 511 aa22.98■■□□□ 1.27
CMTM3-211ENST00000565922 SLC35G1Q2M3R5 365 aa22.98■■□□□ 1.27
CMTM3-211ENST00000565922 DUSP28Q4G0W2 176 aa22.98■■□□□ 1.27
CMTM3-211ENST00000565922 GNASQ5JWF2 1037 aa22.98■■□□□ 1.27
CMTM3-211ENST00000565922 APOA5Q6Q788 366 aa22.98■■□□□ 1.27
CMTM3-211ENST00000565922 CHRDL2Q6WN34 429 aa22.98■■□□□ 1.27
CMTM3-211ENST00000565922 FANCBQ8NB91 859 aa22.98■■□□□ 1.27
CMTM3-211ENST00000565922 SCFD2Q8WU76 684 aa22.98■■□□□ 1.27
CMTM3-211ENST00000565922 STARD7Q9NQZ5 370 aa22.98■■□□□ 1.27
CMTM3-211ENST00000565922 ZMYND8Q9ULU4 1186 aaPredicted RBP22.98■■□□□ 1.27
CMTM3-211ENST00000565922 RBM47A0AV96 593 aaKnown RBP22.97■■□□□ 1.27
CMTM3-211ENST00000565922 NKRFO15226 690 aaKnown RBP eCLIP22.97■■□□□ 1.272e-6■■■□□ 16.7
CMTM3-211ENST00000565922 SMPD1P17405 629 aa22.97■■□□□ 1.27
CMTM3-211ENST00000565922 ARHGEF16Q5VV41 709 aa22.97■■□□□ 1.27
CMTM3-211ENST00000565922 CCSAPQ6IQ19 270 aaPredicted RBP22.97■■□□□ 1.27
CMTM3-211ENST00000565922 BLOC1S2Q6QNY1 142 aa22.97■■□□□ 1.27
CMTM3-211ENST00000565922 TBC1D5Q92609 795 aa22.97■■□□□ 1.27
CMTM3-211ENST00000565922 JAKMIP1Q96N16 626 aaKnown RBP22.97■■□□□ 1.27
CMTM3-211ENST00000565922 TAAR1Q96RJ0 339 aa22.97■■□□□ 1.27
CMTM3-211ENST00000565922 WDR11Q9BZH6 1224 aa22.97■■□□□ 1.27
CMTM3-211ENST00000565922 PDGFCQ9NRA1 345 aa22.97■■□□□ 1.27
CMTM3-211ENST00000565922 COLQQ9Y215 455 aaPredicted RBP22.97■■□□□ 1.27
CMTM3-211ENST00000565922 ATP11BQ9Y2G3 1177 aa22.97■■□□□ 1.27
CMTM3-211ENST00000565922 SNX14Q9Y5W7 946 aa22.97■■□□□ 1.27
CMTM3-211ENST00000565922 DDX49Q9Y6V7 483 aaKnown RBP22.97■■□□□ 1.27
CMTM3-211ENST00000565922 MYADML2A6NDP7 307 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms