RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 MCF2L2Q86YR7 1114 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 TEX13BQ9BXU2 312 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 ANO3Q9BYT9 981 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 HOMER2Q9NSB8 354 aa21.37■■□□□ 1.01
COMMD4-213ENST00000565834 SPDYE3A6NKU9 549 aa21.36■■□□□ 1.01
COMMD4-213ENST00000565834 TOMM70O94826 608 aa21.36■■□□□ 1.01
COMMD4-213ENST00000565834 MARCKSP29966 332 aaPredicted RBP21.36■■□□□ 1.01
COMMD4-213ENST00000565834 HOXA13P31271 388 aaPredicted RBP21.36■■□□□ 1.01
COMMD4-213ENST00000565834 ZNF157P51786 506 aaPredicted RBP21.36■■□□□ 1.01
COMMD4-213ENST00000565834 LBX2Q6XYB7 198 aa21.36■■□□□ 1.01
COMMD4-213ENST00000565834 CLEC4DQ8WXI8 215 aa21.36■■□□□ 1.01
COMMD4-213ENST00000565834 PCDHA7Q9UN72 937 aa21.36■■□□□ 1.01
COMMD4-213ENST00000565834 MCM7P33993 719 aa21.35■■□□□ 1.01
COMMD4-213ENST00000565834 HERVK_113P62684 666 aa21.35■■□□□ 1.01
COMMD4-213ENST00000565834 PLS1Q14651 629 aa21.35■■□□□ 1.01
COMMD4-213ENST00000565834 KLHL40Q2TBA0 621 aa21.35■■□□□ 1.01
COMMD4-213ENST00000565834 LETM2Q2VYF4 491 aa21.35■■□□□ 1.01
COMMD4-213ENST00000565834 GPT2Q8TD30 523 aa21.35■■□□□ 1.01
COMMD4-213ENST00000565834 TRERF1Q96PN7 1200 aa21.35■■□□□ 1.01
COMMD4-213ENST00000565834 PNMA3Q9UL41 463 aa21.35■■□□□ 1.01
COMMD4-213ENST00000565834 NFIBO00712 420 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 STAT3P40763 770 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 MUM1L1Q5H9M0 696 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 RASAL3Q86YV0 1011 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 BRI3BPQ8WY22 251 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 TBC1D5Q92609 795 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 RNF146Q9NTX7 359 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 MORC2Q9Y6X9 1032 aaPredicted RBP21.34■■□□□ 1.01
COMMD4-213ENST00000565834 HSD17B4P51659 736 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 TKFCQ3LXA3 575 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 RGMBQ6NW40 437 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 SAMD3Q8N6K7 520 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 SLC45A1Q9Y2W3 748 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 RIPK3Q9Y572 518 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 TLL2Q9Y6L7 1015 aa21.34■■□□□ 1.01
COMMD4-213ENST00000565834 CCNT1O60563 726 aaKnown RBP21.33■■□□□ 1
COMMD4-213ENST00000565834 GHRHRQ02643 423 aa21.33■■□□□ 1
COMMD4-213ENST00000565834 PTGDRQ13258 359 aa21.33■■□□□ 1
COMMD4-213ENST00000565834 ORC2Q13416 577 aaPredicted RBP21.33■■□□□ 1
COMMD4-213ENST00000565834 ADALQ6DHV7 355 aa21.33■■□□□ 1
COMMD4-213ENST00000565834 FCHSD1Q86WN1 690 aa21.33■■□□□ 1
COMMD4-213ENST00000565834 KRI1Q8N9T8 703 aaKnown RBP21.33■■□□□ 1
COMMD4-213ENST00000565834 BTBD19C9JJ37 291 aa21.32■■□□□ 1
COMMD4-213ENST00000565834 ATP2C1P98194 919 aaPredicted RBP21.32■■□□□ 1
COMMD4-213ENST00000565834 POTEEQ6S8J3 1075 aa21.32■■□□□ 1
COMMD4-213ENST00000565834 ANKRD23Q86SG2 305 aa21.32■■□□□ 1
COMMD4-213ENST00000565834 EHMT1Q9H9B1 1298 aa21.32■■□□□ 1
COMMD4-213ENST00000565834 MAP3K20Q9NYL2 800 aaKnown RBP21.32■■□□□ 1
COMMD4-213ENST00000565834 BTBD7Q9P203 1132 aa21.32■■□□□ 1
COMMD4-213ENST00000565834 PDHXO00330 501 aa21.31■■□□□ 1
COMMD4-213ENST00000565834 CUTAO60888 179 aa21.31■■□□□ 1
COMMD4-213ENST00000565834 SREBF1P36956 1147 aa21.31■■□□□ 1
COMMD4-213ENST00000565834 NAP1L4Q99733 375 aaKnown RBP21.31■■□□□ 1
COMMD4-213ENST00000565834 PAGR1Q9BTK6 254 aa21.31■■□□□ 1
COMMD4-213ENST00000565834 MRVI1Q9Y6F6 885 aa21.31■■□□□ 1
COMMD4-213ENST00000565834 A0A1W2PQ27 194 aa21.31■■□□□ 1
COMMD4-213ENST00000565834 A0A1W2PQ64 194 aa21.31■■□□□ 1
COMMD4-213ENST00000565834 A0A1W2PQD8 194 aa21.31■■□□□ 1
COMMD4-213ENST00000565834 TMEM88BA6NKF7 163 aa21.31■■□□□ 1
COMMD4-213ENST00000565834 PTPREP23469 700 aa21.31■■□□□ 1
COMMD4-213ENST00000565834 USP11P51784 963 aa21.31■■□□□ 1
COMMD4-213ENST00000565834 ARHGAP4P98171 946 aa21.31■■□□□ 1
COMMD4-213ENST00000565834 AXDND1Q5T1B0 1012 aaPredicted RBP21.31■■□□□ 1
COMMD4-213ENST00000565834 GTF3C2Q8WUA4 911 aaPredicted RBP21.31■■□□□ 1
COMMD4-213ENST00000565834 ACAD9Q9H845 621 aa21.31■■□□□ 1
COMMD4-213ENST00000565834 FBXO2Q9UK22 296 aaPredicted RBP21.31■■□□□ 1
COMMD4-213ENST00000565834 ABT1Q9ULW3 272 aaKnown RBP21.31■■□□□ 1
COMMD4-213ENST00000565834 SRPRBQ9Y5M8 271 aaKnown RBP21.31■■□□□ 1
COMMD4-213ENST00000565834 NEMFO60524 1076 aa21.3■■□□□ 1
COMMD4-213ENST00000565834 GCFC2P16383 781 aaKnown RBP21.3■■□□□ 1
COMMD4-213ENST00000565834 FSTL1Q12841 308 aa21.3■■□□□ 1
COMMD4-213ENST00000565834 NSMFQ6X4W1 530 aa21.3■■□□□ 1
COMMD4-213ENST00000565834 RNF207Q6ZRF8 634 aa21.3■■□□□ 1
COMMD4-213ENST00000565834 RIOX2Q8IUF8 465 aa21.3■■□□□ 1
COMMD4-213ENST00000565834 CCAR1Q8IX12 1150 aaKnown RBP21.3■■□□□ 1
COMMD4-213ENST00000565834 FERMT2Q96AC1 680 aa21.3■■□□□ 1
COMMD4-213ENST00000565834 SPATC1LQ9H0A9 340 aa21.3■■□□□ 1
COMMD4-213ENST00000565834 RABGAP1Q9Y3P9 1069 aa21.3■■□□□ 1
COMMD4-213ENST00000565834 LAD1O00515 517 aa21.29■■□□□ 1
COMMD4-213ENST00000565834 EDIL3O43854 480 aa21.29■■□□□ 1
COMMD4-213ENST00000565834 CNMDO75829 334 aa21.29■■□□□ 1
COMMD4-213ENST00000565834 TDP2O95551 362 aa21.29■■□□□ 1
COMMD4-213ENST00000565834 SLC10A3P09131 477 aa21.29■■□□□ 1
COMMD4-213ENST00000565834 CYP2C8P10632 490 aa21.29■■□□□ 1
COMMD4-213ENST00000565834 ARL6IP4Q66PJ3 421 aaKnown RBP21.29■■□□□ 1
COMMD4-213ENST00000565834 PPP4R3AQ6IN85 833 aa21.29■■□□□ 1
COMMD4-213ENST00000565834 C4orf32Q8N8J7 132 aa21.29■■□□□ 1
COMMD4-213ENST00000565834 CHST13Q8NET6 341 aa21.29■■□□□ 1
COMMD4-213ENST00000565834 CRYGNQ8WXF5 182 aa21.29■■□□□ 1
COMMD4-213ENST00000565834 MRPS27Q92552 414 aaKnown RBP21.29■■□□□ 1
COMMD4-213ENST00000565834 CLIC6Q96NY7 704 aa21.29■■□□□ 1
COMMD4-213ENST00000565834 MANSC4A6NHS7 340 aaPredicted RBP21.28■■□□□ 1
COMMD4-213ENST00000565834 PEX10O60683 326 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 RPS6P62753 249 aaKnown RBP21.28■■□□□ 1
COMMD4-213ENST00000565834 FAM43AQ8N2R8 423 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 FSIP1Q8NA03 581 aa21.28■■□□□ 1
COMMD4-213ENST00000565834 ZNF784Q8NCA9 323 aaPredicted RBP21.28■■□□□ 1
COMMD4-213ENST00000565834 SYTL5Q8TDW5 730 aaPredicted RBP21.28■■□□□ 1
COMMD4-213ENST00000565834 SMCR8Q8TEV9 937 aaPredicted RBP21.28■■□□□ 1
COMMD4-213ENST00000565834 MAF1Q9H063 256 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms