RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 TTC6Q86TZ1 520 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 SAPCD2Q86UD0 394 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 EXOC3L1Q86VI1 746 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 PIP4K2CQ8TBX8 421 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 RBM46Q8TBY0 533 aaKnown RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 FOXD4L4Q8WXT5 416 aaPredicted RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 CASP10Q92851 521 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 VPS50Q96JG6 964 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 WDR24Q96S15 920 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 ESYT1Q9BSJ8 1104 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 SELENOOQ9BVL4 669 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 SEZ6LQ9BYH1 1024 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 API5Q9BZZ5 524 aaKnown RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 XPO4Q9C0E2 1151 aaKnown RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 NSRP1Q9H0G5 558 aaKnown RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 FKBP14Q9NWM8 211 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 BIN2Q9UBW5 565 aaPredicted RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 PNMA2Q9UL42 364 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 MTUS1Q9ULD2 1270 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 SPO11Q9Y5K1 396 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 CHD2O14647 1828 aaKnown RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 MROH7Q68CQ1 1323 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 NPHP4O75161 1426 aaPredicted RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 ABCC3O15438 1527 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 SETD1AO15047 1707 aaKnown RBP6.9□□□□□ -1.3
PTPN9-204ENST00000564970 IQANK1A0A1B0GTG1 560 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 ANO9A1A5B4 782 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 POTEFA5A3E0 1075 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 TRIM43BA6NCK2 446 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 TRIM64CA6NLI5 447 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 AKR1B15C9JRZ8 316 aaPredicted RBP6.9□□□□□ -1.3
PTPN9-204ENST00000564970 H0YC42 278 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 ZBTB7BO15156 539 aaPredicted RBP6.9□□□□□ -1.3
PTPN9-204ENST00000564970 TRAPPC3O43617 180 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 ZFYP08048 801 aaPredicted RBP6.9□□□□□ -1.3
PTPN9-204ENST00000564970 NR1D1P20393 614 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 ERCC5P28715 1186 aaPredicted RBP6.9□□□□□ -1.3
PTPN9-204ENST00000564970 GUCY2FP51841 1108 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 TPD52P55327 224 aaPredicted RBP6.9□□□□□ -1.3
PTPN9-204ENST00000564970 ITGA7Q13683 1181 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 WASHC4Q2M389 1173 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 DAB2IPQ5VWQ8 1189 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 ZNF572Q7Z3I7 529 aaPredicted RBP6.9□□□□□ -1.3
PTPN9-204ENST00000564970 BPHLQ86WA6 291 aaPredicted RBP6.9□□□□□ -1.3
PTPN9-204ENST00000564970 CKAP2LQ8IYA6 745 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.9□□□□□ -1.3
PTPN9-204ENST00000564970 TMEM57Q8N5G2 664 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 CCDC197Q8NCU1 140 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 GABPB2Q8TAK5 448 aaPredicted RBP6.9□□□□□ -1.3
PTPN9-204ENST00000564970 SETDB2Q96T68 719 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 SLF1Q9BQI6 1058 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 OSBPL7Q9BZF2 842 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 KRT23Q9C075 422 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 DRC3Q9H069 523 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 ALDH8A1Q9H2A2 487 aaPredicted RBP6.9□□□□□ -1.3
PTPN9-204ENST00000564970 IFT122Q9HBG6 1241 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 KCNMB3Q9NPA1 279 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 SAMSN1Q9NSI8 373 aaKnown RBP6.9□□□□□ -1.3
PTPN9-204ENST00000564970 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.9□□□□□ -1.3
PTPN9-204ENST00000564970 ZNF652Q9Y2D9 606 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 EFR3BQ9Y2G0 817 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 L3MBTL1Q9Y468 752 aa6.9□□□□□ -1.3
PTPN9-204ENST00000564970 JCADQ9P266 1359 aa6.9□□□□□ -1.31
PTPN9-204ENST00000564970 PLEKHG1Q9ULL1 1385 aa6.9□□□□□ -1.31
PTPN9-204ENST00000564970 TRAPPC8Q9Y2L5 1435 aa6.9□□□□□ -1.31
PTPN9-204ENST00000564970 MAGI2Q86UL8 1455 aa6.9□□□□□ -1.31
PTPN9-204ENST00000564970 A0A1B0GVL5 298 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 A0A1W2PQ27 194 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 A0A1W2PQ64 194 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 A0A1W2PQD8 194 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 DNM1LO00429 736 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 CETN3O15182 167 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 ASLP04424 464 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 CHGBP05060 677 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 TSPY4P0CV99 314 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 TSPY10P0CW01 314 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 NAT2P11245 290 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 MYCLP1P12525 358 aaPredicted RBP6.89□□□□□ -1.31
PTPN9-204ENST00000564970 NQO1P15559 274 aaKnown RBP6.89□□□□□ -1.31
PTPN9-204ENST00000564970 FECHP22830 423 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 PDE6BP35913 854 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 RGS2P41220 211 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 APLP1P51693 650 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 VAV2P52735 878 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 BPIFB4P59827 614 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 RPL26P61254 145 aaKnown RBP6.89□□□□□ -1.31
PTPN9-204ENST00000564970 FANCCQ00597 558 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 PLCB3Q01970 1234 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 PAK2Q13177 524 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 TBX2Q13207 712 aaPredicted RBP6.89□□□□□ -1.31
PTPN9-204ENST00000564970 CAMK2BQ13554 666 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 HSP90AA5PQ58FG0 334 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 DEPDC1Q5TB30 811 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 IL23RQ5VWK5 629 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 PCNX4Q63HM2 1172 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 OR52E8Q6IFG1 317 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 ANO7Q6IWH7 933 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 Q6ZUG5 572 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 RAB11FIP4Q86YS3 637 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms