RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 NT5DC1Q5TFE4 455 aa22.14■■□□□ 1.13
CLN6-205ENST00000564846 MOXD1Q6UVY6 613 aa22.14■■□□□ 1.13
CLN6-205ENST00000564846 LUZP1Q86V48 1076 aa22.14■■□□□ 1.13
CLN6-205ENST00000564846 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.14■■□□□ 1.13
CLN6-205ENST00000564846 ZC3H15Q8WU90 426 aaKnown RBP22.14■■□□□ 1.13
CLN6-205ENST00000564846 DDX25Q9UHL0 483 aaKnown RBP22.14■■□□□ 1.13
CLN6-205ENST00000564846 C19orf81C9J6K1 198 aa22.13■■□□□ 1.13
CLN6-205ENST00000564846 SLC37A4O43826 429 aa22.13■■□□□ 1.13
CLN6-205ENST00000564846 UBA7P41226 1012 aa22.13■■□□□ 1.13
CLN6-205ENST00000564846 SH3RF1Q7Z6J0 888 aa22.13■■□□□ 1.13
CLN6-205ENST00000564846 PDLIM2Q96JY6 352 aa22.13■■□□□ 1.13
CLN6-205ENST00000564846 FZD1Q9UP38 647 aa22.13■■□□□ 1.13
CLN6-205ENST00000564846 PCDHA5Q9Y5H7 936 aa22.13■■□□□ 1.13
CLN6-205ENST00000564846 ZHX2Q9Y6X8 837 aa22.13■■□□□ 1.13
CLN6-205ENST00000564846 FOXN1O15353 648 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 USP2O75604 605 aaPredicted RBP22.12■■□□□ 1.13
CLN6-205ENST00000564846 ICAM1P05362 532 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 FXR2P51116 673 aaKnown RBP eCLIP22.12■■□□□ 1.13
CLN6-205ENST00000564846 LDHDQ86WU2 507 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 C12orf42Q96LP6 360 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 BPIFA3Q9BQP9 254 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 TANGO6Q9C0B7 1094 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 CCDC39Q9UFE4 941 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 CYP3A7-CYP3A51PA0A087WV96 503 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 BIN1O00499 593 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 CYP3A7P24462 503 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 EPHX2P34913 555 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 TMEM266Q2M3C6 531 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 DPCR1Q3MIW9 517 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 IGSF22Q8N9C0 903 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 CRYGNQ8WXF5 182 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 SMARCE1Q969G3 411 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 PAGE5Q96GU1 130 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 RAB34Q9BZG1 259 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 RPAP3Q9H6T3 665 aaPredicted RBP22.12■■□□□ 1.13
CLN6-205ENST00000564846 DISC1Q9NRI5 854 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 PNMA2Q9UL42 364 aa22.12■■□□□ 1.13
CLN6-205ENST00000564846 A0A087WWV3 80 aa22.11■■□□□ 1.13
CLN6-205ENST00000564846 GLTPD2A6NH11 291 aa22.11■■□□□ 1.13
CLN6-205ENST00000564846 PPP1R12BO60237 982 aaPredicted RBP22.11■■□□□ 1.13
CLN6-205ENST00000564846 SMC2O95347 1197 aa22.11■■□□□ 1.13
CLN6-205ENST00000564846 FDX1P10109 184 aa22.11■■□□□ 1.13
CLN6-205ENST00000564846 SREBF1P36956 1147 aa22.11■■□□□ 1.13
CLN6-205ENST00000564846 SARSP49591 514 aaKnown RBP22.11■■□□□ 1.13
CLN6-205ENST00000564846 ARHGAP4P98171 946 aa22.11■■□□□ 1.13
CLN6-205ENST00000564846 IQCB1Q15051 598 aa22.11■■□□□ 1.13
CLN6-205ENST00000564846 SAMD1Q6SPF0 538 aaPredicted RBP22.11■■□□□ 1.13
CLN6-205ENST00000564846 KRT26Q7Z3Y9 468 aa22.11■■□□□ 1.13
CLN6-205ENST00000564846 SPATA20Q8TB22 786 aa22.11■■□□□ 1.13
CLN6-205ENST00000564846 PPP1R9AQ9ULJ8 1098 aa22.11■■□□□ 1.13
CLN6-205ENST00000564846 ADM5C9JUS6 153 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 GCOM1H8Y6P7 765 aaPredicted RBP22.1■■□□□ 1.13
CLN6-205ENST00000564846 FLOT1O75955 427 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 PRR29P0C7W0 189 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 POLR2MP0CAP2 368 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 TAL1P17542 331 aaPredicted RBP22.1■■□□□ 1.13
CLN6-205ENST00000564846 CDC25AP30304 524 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 TECP42680 631 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 TXKP42681 527 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 MAP3K9P80192 1104 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 TRIML1Q8N9V2 468 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 MBOAT7Q96N66 472 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 P2RX7Q99572 595 aaKnown RBP22.1■■□□□ 1.13
CLN6-205ENST00000564846 GOLGA6L19H0YKK7 550 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 STAT6P42226 847 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 DGKZQ13574 1117 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 PDIA5Q14554 519 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 PDXDC2PQ6P474 469 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 SLC38A10Q9HBR0 1119 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 CCPG1Q9ULG6 757 aa22.1■■□□□ 1.13
CLN6-205ENST00000564846 ZNF536O15090 1300 aa22.09■■□□□ 1.13
CLN6-205ENST00000564846 PP2D1A8MPX8 630 aa22.09■■□□□ 1.13
CLN6-205ENST00000564846 BECN2A8MW95 431 aa22.09■■□□□ 1.13
CLN6-205ENST00000564846 CFBP00751 764 aa22.09■■□□□ 1.13
CLN6-205ENST00000564846 HOXA13P31271 388 aaPredicted RBP22.09■■□□□ 1.13
CLN6-205ENST00000564846 PRKG1Q13976 671 aa22.09■■□□□ 1.13
CLN6-205ENST00000564846 KARSQ15046 597 aaKnown RBP22.09■■□□□ 1.13
CLN6-205ENST00000564846 RRAGBQ5VZM2 374 aa22.09■■□□□ 1.13
CLN6-205ENST00000564846 CABP7Q86V35 215 aa22.09■■□□□ 1.13
CLN6-205ENST00000564846 RASSF8Q8NHQ8 419 aa22.09■■□□□ 1.13
CLN6-205ENST00000564846 IQCA1LA6NCM1 817 aa22.08■■□□□ 1.13
CLN6-205ENST00000564846 AFMP43652 599 aa22.08■■□□□ 1.13
CLN6-205ENST00000564846 GRAMD1CQ8IYS0 662 aa22.08■■□□□ 1.13
CLN6-205ENST00000564846 CUEDC2Q9H467 287 aa22.08■■□□□ 1.13
CLN6-205ENST00000564846 MAN1B1Q9UKM7 699 aa22.08■■□□□ 1.13
CLN6-205ENST00000564846 AFG3L2Q9Y4W6 797 aa22.08■■□□□ 1.13
CLN6-205ENST00000564846 POLR2AP24928 1970 aaKnown RBP22.08■■□□□ 1.12
CLN6-205ENST00000564846 MARCH6O60337 910 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 ZBED4O75132 1171 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 CYP3A4P08684 503 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 CIITAP33076 1130 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 NF2P35240 595 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 DPYDQ12882 1025 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.07■■□□□ 1.12
CLN6-205ENST00000564846 RBM46Q8TBY0 533 aaKnown RBP22.07■■□□□ 1.12
CLN6-205ENST00000564846 HAS1Q92839 578 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 AGBL1Q96MI9 1066 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 TTC12Q9H892 705 aaPredicted RBP22.07■■□□□ 1.12
CLN6-205ENST00000564846 EHMT1Q9H9B1 1298 aa22.07■■□□□ 1.12
CLN6-205ENST00000564846 MAGEF1Q9HAY2 307 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms