RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 MFAP1P55081 439 aaKnown RBP24.64■■□□□ 1.54
CHD9-208ENST00000563410 ITGA7Q13683 1181 aa24.64■■□□□ 1.54
CHD9-208ENST00000563410 SLC30A10Q6XR72 485 aa24.64■■□□□ 1.54
CHD9-208ENST00000563410 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.64■■□□□ 1.54
CHD9-208ENST00000563410 RNF41Q9H4P4 317 aaPredicted RBP24.64■■□□□ 1.54
CHD9-208ENST00000563410 ADD3Q9UEY8 706 aaKnown RBP24.64■■□□□ 1.54
CHD9-208ENST00000563410 GBF1Q92538 1859 aa24.64■■□□□ 1.53
CHD9-208ENST00000563410 LOC102724159A0A0B4J2E5 919 aa24.63■■□□□ 1.53
CHD9-208ENST00000563410 PTPDC1A2A3K4 754 aa24.63■■□□□ 1.53
CHD9-208ENST00000563410 PWP2Q15269 919 aaKnown RBP24.63■■□□□ 1.53
CHD9-208ENST00000563410 DUSP28Q4G0W2 176 aa24.63■■□□□ 1.53
CHD9-208ENST00000563410 RASIP1Q5U651 963 aa24.63■■□□□ 1.53
CHD9-208ENST00000563410 TMEM199Q8N511 208 aa24.63■■□□□ 1.53
CHD9-208ENST00000563410 YTHDC1Q96MU7 727 aaKnown RBP24.63■■□□□ 1.53
CHD9-208ENST00000563410 ZKSCAN3Q9BRR0 538 aa24.63■■□□□ 1.53
CHD9-208ENST00000563410 WDR19Q8NEZ3 1342 aa24.62■■□□□ 1.53
CHD9-208ENST00000563410 RBM47A0AV96 593 aaKnown RBP24.62■■□□□ 1.53
CHD9-208ENST00000563410 ZEB2O60315 1214 aa24.62■■□□□ 1.53
CHD9-208ENST00000563410 ACRP10323 421 aa24.62■■□□□ 1.53
CHD9-208ENST00000563410 DNAJB2P25686 324 aa24.62■■□□□ 1.53
CHD9-208ENST00000563410 CYP2C18P33260 490 aa24.62■■□□□ 1.53
CHD9-208ENST00000563410 PSMC6P62333 389 aa24.62■■□□□ 1.53
CHD9-208ENST00000563410 CWC27Q6UX04 472 aaKnown RBP24.62■■□□□ 1.53
CHD9-208ENST00000563410 MAFAQ8NHW3 353 aaPredicted RBP24.62■■□□□ 1.53
CHD9-208ENST00000563410 EXOC6Q8TAG9 804 aa24.62■■□□□ 1.53
CHD9-208ENST00000563410 ESR2Q92731 530 aa24.62■■□□□ 1.53
CHD9-208ENST00000563410 SCN10AQ9Y5Y9 1956 aa24.62■■□□□ 1.53
CHD9-208ENST00000563410 UMODL1Q5DID0 1318 aa24.61■■□□□ 1.53
CHD9-208ENST00000563410 ZNF213O14771 459 aa24.61■■□□□ 1.53
CHD9-208ENST00000563410 CALML3P27482 149 aa24.61■■□□□ 1.53
CHD9-208ENST00000563410 RNF207Q6ZRF8 634 aa24.61■■□□□ 1.53
CHD9-208ENST00000563410 ZNF365Q70YC5 407 aa24.61■■□□□ 1.53
CHD9-208ENST00000563410 DGKHQ86XP1 1220 aa24.61■■□□□ 1.53
CHD9-208ENST00000563410 WDR11Q9BZH6 1224 aa24.61■■□□□ 1.53
CHD9-208ENST00000563410 GOLGA8HP0CJ92 632 aa24.6■■□□□ 1.53
CHD9-208ENST00000563410 RPS6P62753 249 aaKnown RBP24.6■■□□□ 1.53
CHD9-208ENST00000563410 GPATCH4Q5T3I0 446 aaKnown RBP24.6■■□□□ 1.53
CHD9-208ENST00000563410 SEZ6LQ9BYH1 1024 aa24.6■■□□□ 1.53
CHD9-208ENST00000563410 CPVLQ9H3G5 476 aa24.6■■□□□ 1.53
CHD9-208ENST00000563410 PNMA2Q9UL42 364 aa24.6■■□□□ 1.53
CHD9-208ENST00000563410 B4GALT4O60513 344 aa24.59■■□□□ 1.53
CHD9-208ENST00000563410 EDNRBP24530 442 aa24.59■■□□□ 1.53
CHD9-208ENST00000563410 GRIN2CQ14957 1233 aa24.59■■□□□ 1.53
CHD9-208ENST00000563410 PSRC1Q6PGN9 363 aaPredicted RBP24.59■■□□□ 1.53
CHD9-208ENST00000563410 COL25A1Q9BXS0 654 aaPredicted RBP24.59■■□□□ 1.53
CHD9-208ENST00000563410 UBA5Q9GZZ9 404 aa24.59■■□□□ 1.53
CHD9-208ENST00000563410 TRPV6Q9H1D0 765 aa24.59■■□□□ 1.53
CHD9-208ENST00000563410 HIPK3Q9H422 1215 aa24.59■■□□□ 1.53
CHD9-208ENST00000563410 IL23AQ9NPF7 189 aa24.59■■□□□ 1.53
CHD9-208ENST00000563410 KDM4AO75164 1064 aa24.58■■□□□ 1.53
CHD9-208ENST00000563410 FOSL2P15408 326 aa24.58■■□□□ 1.53
CHD9-208ENST00000563410 PNMA1Q8ND90 353 aa24.58■■□□□ 1.53
CHD9-208ENST00000563410 NOC4LQ9BVI4 516 aaKnown RBP24.58■■□□□ 1.53
CHD9-208ENST00000563410 DIAPH3Q9NSV4 1193 aa24.58■■□□□ 1.53
CHD9-208ENST00000563410 KIAA1217Q5T5P2 1943 aa24.58■■□□□ 1.53
CHD9-208ENST00000563410 CHD9Q3L8U1 2897 aa24.58■■□□□ 1.53
CHD9-208ENST00000563410 SPTBN5Q9NRC6 3674 aaKnown RBP24.58■■□□□ 1.52
CHD9-208ENST00000563410 SCN5AQ14524 2016 aa24.57■■□□□ 1.52
CHD9-208ENST00000563410 GRXCR1A8MXD5 290 aa24.57■■□□□ 1.52
CHD9-208ENST00000563410 NT5C2P49902 561 aa24.57■■□□□ 1.52
CHD9-208ENST00000563410 DNERQ8NFT8 737 aa24.57■■□□□ 1.52
CHD9-208ENST00000563410 ANKS1AQ92625 1134 aa24.57■■□□□ 1.52
CHD9-208ENST00000563410 TIFAQ96CG3 184 aa24.57■■□□□ 1.52
CHD9-208ENST00000563410 DSCC1Q9BVC3 393 aa24.57■■□□□ 1.52
CHD9-208ENST00000563410 PBX4Q9BYU1 374 aa24.57■■□□□ 1.52
CHD9-208ENST00000563410 ZNF576Q9H609 170 aa24.57■■□□□ 1.52
CHD9-208ENST00000563410 B4E1Z4 1266 aa24.56■■□□□ 1.52
CHD9-208ENST00000563410 PBX2P40425 430 aa24.56■■□□□ 1.52
CHD9-208ENST00000563410 CCL23P55773 120 aa24.56■■□□□ 1.52
CHD9-208ENST00000563410 PURAQ00577 322 aaKnown RBP24.56■■□□□ 1.52
CHD9-208ENST00000563410 USH1GQ495M9 461 aa24.56■■□□□ 1.52
CHD9-208ENST00000563410 CCDC178Q5BJE1 867 aa24.56■■□□□ 1.52
CHD9-208ENST00000563410 IQCA1Q86XH1 822 aa24.56■■□□□ 1.52
CHD9-208ENST00000563410 HERVK_113Q902F9 699 aa24.56■■□□□ 1.52
CHD9-208ENST00000563410 WNT8AQ9H1J5 351 aa24.56■■□□□ 1.52
CHD9-208ENST00000563410 ALDH8A1Q9H2A2 487 aaPredicted RBP24.56■■□□□ 1.52
CHD9-208ENST00000563410 POLR3EQ9NVU0 708 aa24.56■■□□□ 1.52
CHD9-208ENST00000563410 HIP1O00291 1037 aa24.55■■□□□ 1.52
CHD9-208ENST00000563410 PDE4DQ08499 809 aa24.55■■□□□ 1.52
CHD9-208ENST00000563410 RGS22Q8NE09 1264 aa24.55■■□□□ 1.52
CHD9-208ENST00000563410 OR6J1Q8NGC5 347 aa24.55■■□□□ 1.52
CHD9-208ENST00000563410 ZSCAN10Q96SZ4 725 aaPredicted RBP24.55■■□□□ 1.52
CHD9-208ENST00000563410 CXXC1Q9P0U4 656 aaPredicted RBP24.55■■□□□ 1.52
CHD9-208ENST00000563410 ZSWIM5Q9P217 1185 aa24.55■■□□□ 1.52
CHD9-208ENST00000563410 CPT1AP50416 773 aa24.54■■□□□ 1.52
CHD9-208ENST00000563410 CDC37Q16543 378 aaPredicted RBP24.54■■□□□ 1.52
CHD9-208ENST00000563410 ADGRF4Q8IZF3 695 aa24.54■■□□□ 1.52
CHD9-208ENST00000563410 ENAHQ8N8S7 591 aaPredicted RBP24.54■■□□□ 1.52
CHD9-208ENST00000563410 TBC1D5Q92609 795 aa24.54■■□□□ 1.52
CHD9-208ENST00000563410 COPS5Q92905 334 aa24.54■■□□□ 1.52
CHD9-208ENST00000563410 VWCEQ96DN2 955 aa24.54■■□□□ 1.52
CHD9-208ENST00000563410 IL25Q9H293 177 aa24.54■■□□□ 1.52
CHD9-208ENST00000563410 KAT14Q9H8E8 782 aa24.54■■□□□ 1.52
CHD9-208ENST00000563410 NKRFO15226 690 aaKnown RBP eCLIP24.53■■□□□ 1.522e-8■■□□□ 11.5
CHD9-208ENST00000563410 FGBP02675 491 aa24.53■■□□□ 1.52
CHD9-208ENST00000563410 MYL3P08590 195 aa24.53■■□□□ 1.52
CHD9-208ENST00000563410 PPP2R5BQ15173 497 aa24.53■■□□□ 1.52
CHD9-208ENST00000563410 SCFD2Q8WU76 684 aa24.53■■□□□ 1.52
CHD9-208ENST00000563410 MPHOSPH6Q99547 160 aaKnown RBP24.53■■□□□ 1.52
CHD9-208ENST00000563410 TRMT13Q9NUP7 481 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 242.4 ms