RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 C9orf50Q5SZB4 431 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 TMEM63BQ5T3F8 832 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 TTC22Q5TAA0 569 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 SLC30A10Q6XR72 485 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.68□□□□□ -0.86
GINS3-204ENST00000561952 TLK2Q86UE8 772 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 KLHDC9Q8NEP7 349 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 NUP133Q8WUM0 1156 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 UBA5Q9GZZ9 404 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 KATNBL1Q9H079 304 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 KAT14Q9H8E8 782 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 PDGFCQ9NRA1 345 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 TMEM39AQ9NV64 488 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 TNKSO95271 1327 aa9.67□□□□□ -0.86
GINS3-204ENST00000561952 ASB14A6NK59 587 aa9.67□□□□□ -0.86
GINS3-204ENST00000561952 PCP11498 1178 aaKnown RBP9.67□□□□□ -0.86
GINS3-204ENST00000561952 SHHQ15465 462 aa9.67□□□□□ -0.86
GINS3-204ENST00000561952 LRIT3Q3SXY7 679 aa9.67□□□□□ -0.86
GINS3-204ENST00000561952 BTNL9Q6UXG8 535 aa9.67□□□□□ -0.86
GINS3-204ENST00000561952 IQCA1Q86XH1 822 aa9.67□□□□□ -0.86
GINS3-204ENST00000561952 PNMA1Q8ND90 353 aa9.67□□□□□ -0.86
GINS3-204ENST00000561952 GLT1D1Q96MS3 346 aa9.67□□□□□ -0.86
GINS3-204ENST00000561952 TSEN34Q9BSV6 310 aaKnown RBP9.67□□□□□ -0.86
GINS3-204ENST00000561952 DSCC1Q9BVC3 393 aa9.67□□□□□ -0.86
GINS3-204ENST00000561952 MOXD2PA6NHM9 499 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 DCDC2CA8MYV0 355 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 DYNC1LI2O43237 492 aaPredicted RBP9.66□□□□□ -0.86
GINS3-204ENST00000561952 SMPD1P17405 629 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 ALDH5A1P51649 535 aaPredicted RBP9.66□□□□□ -0.86
GINS3-204ENST00000561952 GJA9P57773 515 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 FAAP100Q0VG06 881 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 CDC37Q16543 378 aaPredicted RBP9.66□□□□□ -0.86
GINS3-204ENST00000561952 CCSAPQ6IQ19 270 aaPredicted RBP9.66□□□□□ -0.86
GINS3-204ENST00000561952 CXCL17Q6UXB2 119 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 RNF207Q6ZRF8 634 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 KIAA1211Q6ZU35 1233 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 TICAM2Q86XR7 235 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 ENAHQ8N8S7 591 aaPredicted RBP9.66□□□□□ -0.86
GINS3-204ENST00000561952 PCSK9Q8NBP7 692 aaKnown RBP9.66□□□□□ -0.86
GINS3-204ENST00000561952 TTC14Q96N46 770 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 ZSCAN10Q96SZ4 725 aaPredicted RBP9.66□□□□□ -0.86
GINS3-204ENST00000561952 UBAC1Q9BSL1 405 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 PPP1R12CQ9BZL4 782 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 AP5M1Q9H0R1 490 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 UPF3AQ9H1J1 476 aaKnown RBP9.66□□□□□ -0.86
GINS3-204ENST00000561952 VAT1LQ9HCJ6 419 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 ZSWIM5Q9P217 1185 aa9.66□□□□□ -0.86
GINS3-204ENST00000561952 A0A0U1RQG5 324 aaPredicted RBP9.65□□□□□ -0.86
GINS3-204ENST00000561952 CTAGE5O15320 804 aa9.65□□□□□ -0.86
GINS3-204ENST00000561952 SNHG28P0DPA3 235 aa9.65□□□□□ -0.86
GINS3-204ENST00000561952 CST5P28325 142 aaPredicted RBP9.65□□□□□ -0.86
GINS3-204ENST00000561952 EPHB4P54760 987 aa9.65□□□□□ -0.86
GINS3-204ENST00000561952 PSMC6P62333 389 aa9.65□□□□□ -0.86
GINS3-204ENST00000561952 RPS6P62753 249 aaKnown RBP9.65□□□□□ -0.86
GINS3-204ENST00000561952 PTH1RQ03431 593 aa9.65□□□□□ -0.86
GINS3-204ENST00000561952 FSCN1Q16658 493 aaKnown RBP9.65□□□□□ -0.86
GINS3-204ENST00000561952 GPATCH4Q5T3I0 446 aaKnown RBP9.65□□□□□ -0.86
GINS3-204ENST00000561952 IFIT1BQ5T764 474 aaKnown RBP9.65□□□□□ -0.86
GINS3-204ENST00000561952 C1orf53Q5VUE5 145 aa9.65□□□□□ -0.86
GINS3-204ENST00000561952 TAPT1Q6NXT6 567 aa9.65□□□□□ -0.86
GINS3-204ENST00000561952 CYB5R4Q7L1T6 521 aa9.65□□□□□ -0.86
GINS3-204ENST00000561952 PPP1R13LQ8WUF5 828 aa9.65□□□□□ -0.86
GINS3-204ENST00000561952 CLEC4DQ8WXI8 215 aa9.65□□□□□ -0.86
GINS3-204ENST00000561952 RNPC3Q96LT9 517 aaKnown RBP9.65□□□□□ -0.86
GINS3-204ENST00000561952 KRT23Q9C075 422 aa9.65□□□□□ -0.86
GINS3-204ENST00000561952 ADD3Q9UEY8 706 aaKnown RBP9.65□□□□□ -0.86
GINS3-204ENST00000561952 CTNNA3Q9UI47 895 aa9.65□□□□□ -0.86
GINS3-204ENST00000561952 BAZ2BQ9UIF8 2168 aaKnown RBP9.65□□□□□ -0.86
GINS3-204ENST00000561952 MROH7Q68CQ1 1323 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 ARVCFO00192 962 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 KIAA0355O15063 1070 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 MYL3P08590 195 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 PARP1P09874 1014 aaKnown RBP9.64□□□□□ -0.87
GINS3-204ENST00000561952 CHMP4BP1P59074 171 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 FPGSQ05932 587 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 PDE4DQ08499 809 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 CCDC178Q5BJE1 867 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 CHST3Q7LGC8 479 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 SKAP1Q86WV1 359 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 DGKHQ86XP1 1220 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 ADGRF4Q8IZF3 695 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 OR6J1Q8NGC5 347 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 CNNM2Q9H8M5 875 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 VTA1Q9NP79 307 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 GNEQ9Y223 722 aaKnown RBP9.64□□□□□ -0.87
GINS3-204ENST00000561952 UNC80Q8N2C7 3258 aa9.64□□□□□ -0.87
GINS3-204ENST00000561952 ELP1O95163 1332 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 WDR19Q8NEZ3 1342 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 RAD50Q92878 1312 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 KIAA1217Q5T5P2 1943 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 TLR3O15455 904 aaKnown RBP9.63□□□□□ -0.87
GINS3-204ENST00000561952 ACRP10323 421 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 CHMLP26374 656 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 TRDNQ13061 729 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 QRICH1Q2TAL8 776 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 ASPRV1Q53RT3 343 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 ZNF697Q5TEC3 545 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 ANKRD33Q7Z3H0 272 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 HOMER1Q86YM7 354 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 STAG2Q8N3U4 1231 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms