RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	FBLIM1	Q8WUP2	373 aa		9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	PLEKHF1	Q96S99	279 aa		9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	BRIP1	Q9BX63	1249 aa		9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	ATXN3L	Q9H3M9	355 aa		9.26	□□□□□ -0.93
MARK3-223	ENST00000561071	NPHP1	O15259	732 aa		9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	TOMM70	O94826	608 aa		9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	BPNT1	O95861	308 aa		9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	NEFM	P07197	916 aa		9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	PDE6B	P35913	854 aa		9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	TNNI2	P48788	182 aa		9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	DDX10	Q13206	875 aa	Known RBP	9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	NFE2L2	Q16236	605 aa		9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	HLF	Q16534	295 aa		9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	CYFIP1	Q7L576	1253 aa		9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	HDX	Q7Z353	690 aa		9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	FAM20C	Q8IXL6	584 aa		9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	CNBD1	Q8NA66	436 aa		9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	SNCAIP	Q9Y6H5	919 aa		9.25	□□□□□ -0.93
MARK3-223	ENST00000561071	NTF4	P34130	210 aa		9.24	□□□□□ -0.93
MARK3-223	ENST00000561071	HTRA3	P83110	453 aa		9.24	□□□□□ -0.93
MARK3-223	ENST00000561071	PAK2	Q13177	524 aa		9.24	□□□□□ -0.93
MARK3-223	ENST00000561071	MPP2	Q14168	576 aa		9.24	□□□□□ -0.93
MARK3-223	ENST00000561071	NBPF5P	Q86XG9	351 aa	Predicted RBP	9.24	□□□□□ -0.93
MARK3-223	ENST00000561071	RNF214	Q8ND24	703 aa		9.24	□□□□□ -0.93
MARK3-223	ENST00000561071	KCNF1	Q9H3M0	494 aa		9.24	□□□□□ -0.93
MARK3-223	ENST00000561071	ACSS3	Q9H6R3	686 aa		9.24	□□□□□ -0.93
MARK3-223	ENST00000561071	CCSER2	Q9H7U1	834 aa		9.24	□□□□□ -0.93
MARK3-223	ENST00000561071	PIDD1	Q9HB75	910 aa		9.24	□□□□□ -0.93
MARK3-223	ENST00000561071	PICK1	Q9NRD5	415 aa		9.24	□□□□□ -0.93
MARK3-223	ENST00000561071	RRP7A	Q9Y3A4	280 aa	Known RBP	9.24	□□□□□ -0.93
MARK3-223	ENST00000561071	SBF1	O95248	1867 aa		9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	ANKRD31	Q8N7Z5	1873 aa		9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	SCN7A	Q01118	1682 aa		9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	RNGTT	O60942	597 aa	Known RBP	9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	SRGN	P10124	158 aa		9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	MYL6B	P14649	208 aa		9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	MAP4	P27816	1152 aa	Known RBP	9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	EIF4A1	P60842	406 aa	Known RBP	9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	ST5	P78524	1137 aa		9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	APOBR	Q0VD83	1088 aa		9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	C16orf71	Q8IYS4	520 aa	Predicted RBP	9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	NT5C1A	Q9BXI3	368 aa		9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	SEMA6C	Q9H3T2	930 aa		9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	NIP7	Q9Y221	180 aa	Known RBP eCLIP	9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	KDM2B	Q8NHM5	1336 aa		9.23	□□□□□ -0.93
MARK3-223	ENST00000561071	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	DHX15	O43143	795 aa	Known RBP	9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	NFIC	P08651	508 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	RIPK4	P57078	832 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	SEZ6	Q53EL9	994 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	ZBTB37	Q5TC79	503 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	STYK1	Q6J9G0	422 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	OLFM4	Q6UX06	510 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	CLEC4G	Q6UXB4	293 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	TTLL7	Q6ZT98	887 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	REC114	Q7Z4M0	266 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	UBE3D	Q7Z6J8	389 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	CCDC146	Q8IYE0	955 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	ISL2	Q96A47	359 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	DAGLA	Q9Y4D2	1042 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	CORIN	Q9Y5Q5	1042 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	MAPK8IP3	Q9UPT6	1336 aa		9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	COL11A2	P13942	1736 aa	Predicted RBP	9.22	□□□□□ -0.93
MARK3-223	ENST00000561071	DLG5	Q8TDM6	1919 aa		9.21	□□□□□ -0.93
MARK3-223	ENST00000561071	PRR23C	Q6ZRP0	262 aa		9.21	□□□□□ -0.94
MARK3-223	ENST00000561071	BEND4	Q6ZU67	534 aa		9.21	□□□□□ -0.94
MARK3-223	ENST00000561071	SMYD4	Q8IYR2	804 aa	Predicted RBP	9.21	□□□□□ -0.94
MARK3-223	ENST00000561071	PNISR	Q8TF01	805 aa	Known RBP	9.21	□□□□□ -0.94
MARK3-223	ENST00000561071	EZH1	Q92800	747 aa	Predicted RBP	9.21	□□□□□ -0.94
MARK3-223	ENST00000561071	NKD1	Q969G9	470 aa		9.21	□□□□□ -0.94
MARK3-223	ENST00000561071	MASTL	Q96GX5	879 aa		9.21	□□□□□ -0.94
MARK3-223	ENST00000561071	LRRC3	Q9BY71	257 aa		9.21	□□□□□ -0.94
MARK3-223	ENST00000561071	BRMS1	Q9HCU9	246 aa		9.21	□□□□□ -0.94
MARK3-223	ENST00000561071	ZNF652	Q9Y2D9	606 aa		9.21	□□□□□ -0.94
MARK3-223	ENST00000561071	DLEC1	Q9Y238	1755 aa		9.21	□□□□□ -0.94
MARK3-223	ENST00000561071	SLX4	Q8IY92	1834 aa		9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	HMX2	A2RU54	273 aa		9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	GLTPD2	A6NH11	291 aa		9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	FANCG	O15287	622 aa		9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	DYNC1LI2	O43237	492 aa	Predicted RBP	9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	GPT	P24298	496 aa		9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	GRK4	P32298	578 aa		9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	ETF1	P62495	437 aa	Known RBP	9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	RALBP1	Q15311	655 aa		9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	NFKBIB	Q15653	356 aa		9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	CWF19L2	Q2TBE0	894 aa	Known RBP	9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	DIEXF	Q68CQ4	756 aa	Known RBP	9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	DNAJC5G	Q8N7S2	189 aa		9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	WNT10A	Q9GZT5	417 aa		9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	TSPYL4	Q9UJ04	414 aa		9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	RAX	Q9Y2V3	346 aa		9.2	□□□□□ -0.94
MARK3-223	ENST00000561071	BCOR	Q6W2J9	1755 aa		9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	CCDC88A	Q3V6T2	1871 aa		9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	FAM95C	A0A1B0GW59	222 aa		9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	ANXA1	P04083	346 aa		9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	VEGFA	P15692	232 aa	Predicted RBP	9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	NPR1	P16066	1061 aa		9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	EIF2S2	P20042	333 aa	Known RBP	9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	TMPO	P42166	694 aa	Known RBP	9.19	□□□□□ -0.94

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