RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 BUB1BO60566 1050 aaPredicted RBP6.98□□□□□ -1.29
PSMA4-221ENST00000560842 ZNF205O95201 554 aa6.98□□□□□ -1.29
PSMA4-221ENST00000560842 KCNC1P48547 511 aa6.98□□□□□ -1.29
PSMA4-221ENST00000560842 PCBP3P57721 371 aaKnown RBP6.98□□□□□ -1.29
PSMA4-221ENST00000560842 TMEM62Q0P6H9 643 aa6.98□□□□□ -1.29
PSMA4-221ENST00000560842 DDR2Q16832 855 aa6.98□□□□□ -1.29
PSMA4-221ENST00000560842 MRM1Q6IN84 353 aaKnown RBP6.98□□□□□ -1.29
PSMA4-221ENST00000560842 HIRIP3Q9BW71 556 aaPredicted RBP6.98□□□□□ -1.29
PSMA4-221ENST00000560842 FAM86C1Q9NVL1 165 aa6.98□□□□□ -1.29
PSMA4-221ENST00000560842 MSRB2Q9Y3D2 182 aa6.98□□□□□ -1.29
PSMA4-221ENST00000560842 SSU72P8A0A1W2PR75 194 aa6.97□□□□□ -1.29
PSMA4-221ENST00000560842 FFAR3O14843 346 aa6.97□□□□□ -1.29
PSMA4-221ENST00000560842 VAV1P15498 845 aa6.97□□□□□ -1.29
PSMA4-221ENST00000560842 NOL9Q5SY16 702 aaKnown RBP6.97□□□□□ -1.29
PSMA4-221ENST00000560842 LARP1BQ659C4 914 aaKnown RBP6.97□□□□□ -1.29
PSMA4-221ENST00000560842 GALNT18Q6P9A2 607 aa6.97□□□□□ -1.29
PSMA4-221ENST00000560842 TMC6Q7Z403 805 aa6.97□□□□□ -1.29
PSMA4-221ENST00000560842 CKAP2LQ8IYA6 745 aa6.97□□□□□ -1.29
PSMA4-221ENST00000560842 FIBCD1Q8N539 461 aa6.97□□□□□ -1.29
PSMA4-221ENST00000560842 GBP3Q9H0R5 595 aa6.97□□□□□ -1.29
PSMA4-221ENST00000560842 TNFRSF10DQ9UBN6 386 aa6.97□□□□□ -1.29
PSMA4-221ENST00000560842 FADS2P1A8MWK0 482 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 B2RBV5 119 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 PPM1BO75688 479 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 GJB6O95452 261 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 CAPNS1P04632 268 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 NAT2P11245 290 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 ENDOUP21128 410 aaKnown RBP6.96□□□□□ -1.3
PSMA4-221ENST00000560842 GTF2F1P35269 517 aaKnown RBP eCLIP6.96□□□□□ -1.3
PSMA4-221ENST00000560842 ARL4AP40617 200 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 SLURP1P55000 103 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 SERINC3Q13530 473 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 LAPTM5Q13571 262 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 CBX2Q14781 532 aaPredicted RBP6.96□□□□□ -1.3
PSMA4-221ENST00000560842 RAB3GAP1Q15042 981 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 BRF1Q92994 677 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 APBA2Q99767 749 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 SLC12A9Q9BXP2 914 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 EPN3Q9H201 632 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 SF3B6Q9Y3B4 125 aaKnown RBP6.96□□□□□ -1.3
PSMA4-221ENST00000560842 R3HCC1Q9Y3T6 440 aaKnown RBP6.96□□□□□ -1.3
PSMA4-221ENST00000560842 IRS2Q9Y4H2 1338 aa6.96□□□□□ -1.3
PSMA4-221ENST00000560842 WTIPA6NIX2 430 aaPredicted RBP6.95□□□□□ -1.3
PSMA4-221ENST00000560842 H0Y8X5 98 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 SUSD5O60279 629 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 SYPP08247 313 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 NCKAP1LP55160 1127 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 GRB10Q13322 594 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 KIR3DS1Q14943 382 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 HSF5Q4G112 596 aaPredicted RBP6.95□□□□□ -1.3
PSMA4-221ENST00000560842 RTP2Q5QGT7 225 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 SOGA3Q5TF21 947 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 CRTC3Q6UUV7 619 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 ZPBP2Q6X784 338 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 NLGN1Q8N2Q7 840 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 MRGPRX3Q96LB0 322 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 FGD4Q96M96 766 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 DSCC1Q9BVC3 393 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 APEX2Q9UBZ4 518 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 CGGBP1Q9UFW8 167 aaPredicted RBP6.95□□□□□ -1.3
PSMA4-221ENST00000560842 PALD1Q9ULE6 856 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 EMC9Q9Y3B6 208 aa6.95□□□□□ -1.3
PSMA4-221ENST00000560842 K7ESM1 405 aa6.94□□□□□ -1.3
PSMA4-221ENST00000560842 AKAP8O43823 692 aaKnown RBP6.94□□□□□ -1.3
PSMA4-221ENST00000560842 DDAH1O94760 285 aa6.94□□□□□ -1.3
PSMA4-221ENST00000560842 CEBPAP49715 358 aaPredicted RBP6.94□□□□□ -1.3
PSMA4-221ENST00000560842 FCRL2Q96LA5 508 aaPredicted RBP6.94□□□□□ -1.3
PSMA4-221ENST00000560842 DRC1Q96MC2 740 aa6.94□□□□□ -1.3
PSMA4-221ENST00000560842 NOL6Q9H6R4 1146 aaKnown RBP6.94□□□□□ -1.3
PSMA4-221ENST00000560842 SIRPGQ9P1W8 387 aa6.94□□□□□ -1.3
PSMA4-221ENST00000560842 MEIS1O00470 390 aa6.93□□□□□ -1.3
PSMA4-221ENST00000560842 FKTNO75072 461 aa6.93□□□□□ -1.3
PSMA4-221ENST00000560842 IGFBP6P24592 240 aaPredicted RBP6.93□□□□□ -1.3
PSMA4-221ENST00000560842 POU4F1Q01851 419 aa6.93□□□□□ -1.3
PSMA4-221ENST00000560842 EEPD1Q7L9B9 569 aa6.93□□□□□ -1.3
PSMA4-221ENST00000560842 LRP10Q7Z4F1 713 aa6.93□□□□□ -1.3
PSMA4-221ENST00000560842 BVESQ8NE79 360 aa6.93□□□□□ -1.3
PSMA4-221ENST00000560842 ST13P5Q8NFI4 369 aaPredicted RBP6.93□□□□□ -1.3
PSMA4-221ENST00000560842 ZNF669Q96BR6 464 aaPredicted RBP6.93□□□□□ -1.3
PSMA4-221ENST00000560842 FCRL3Q96P31 734 aaPredicted RBP6.93□□□□□ -1.3
PSMA4-221ENST00000560842 CCDC113Q9H0I3 377 aa6.93□□□□□ -1.3
PSMA4-221ENST00000560842 TAF6LQ9Y6J9 622 aa6.93□□□□□ -1.3
PSMA4-221ENST00000560842 NUDT19A8MXV4 375 aa6.92□□□□□ -1.3
PSMA4-221ENST00000560842 NOP2P46087 812 aaKnown RBP6.92□□□□□ -1.3
PSMA4-221ENST00000560842 CYP4F8P98187 520 aa6.92□□□□□ -1.3
PSMA4-221ENST00000560842 ZNF827Q17R98 1081 aa6.92□□□□□ -1.3
PSMA4-221ENST00000560842 UBXN11Q5T124 520 aa6.92□□□□□ -1.3
PSMA4-221ENST00000560842 CWF19L1Q69YN2 538 aaKnown RBP6.92□□□□□ -1.3
PSMA4-221ENST00000560842 ADAT2Q7Z6V5 191 aaKnown RBP6.92□□□□□ -1.3
PSMA4-221ENST00000560842 TRIM59Q8IWR1 403 aa6.92□□□□□ -1.3
PSMA4-221ENST00000560842 TRIM55Q9BYV6 548 aa6.92□□□□□ -1.3
PSMA4-221ENST00000560842 TNFRSF12AQ9NP84 129 aa6.92□□□□□ -1.3
PSMA4-221ENST00000560842 ST7Q9NRC1 585 aa6.92□□□□□ -1.3
PSMA4-221ENST00000560842 ACSL6Q9UKU0 697 aa6.92□□□□□ -1.3
PSMA4-221ENST00000560842 SUV39H1O43463 412 aa6.91□□□□□ -1.3
PSMA4-221ENST00000560842 PRKCAP17252 672 aa6.91□□□□□ -1.3
PSMA4-221ENST00000560842 MAGEA10P43363 369 aaPredicted RBP6.91□□□□□ -1.3
PSMA4-221ENST00000560842 SLC10A6Q3KNW5 377 aa6.91□□□□□ -1.3
PSMA4-221ENST00000560842 RCSD1Q6JBY9 416 aa6.91□□□□□ -1.3
PSMA4-221ENST00000560842 POMZP3Q6PJE2 187 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms