RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 GTF2A2P52657 109 aa9.8□□□□□ -0.84
TRAF3-209ENST00000560463 PTGDRQ13258 359 aa9.8□□□□□ -0.84
TRAF3-209ENST00000560463 TKFCQ3LXA3 575 aa9.8□□□□□ -0.84
TRAF3-209ENST00000560463 NOM1Q5C9Z4 860 aaKnown RBP9.8□□□□□ -0.84
TRAF3-209ENST00000560463 AXDND1Q5T1B0 1012 aaPredicted RBP9.8□□□□□ -0.84
TRAF3-209ENST00000560463 PPP4R3AQ6IN85 833 aa9.8□□□□□ -0.84
TRAF3-209ENST00000560463 MOXD1Q6UVY6 613 aa9.8□□□□□ -0.84
TRAF3-209ENST00000560463 REPS2Q8NFH8 660 aa9.8□□□□□ -0.84
TRAF3-209ENST00000560463 MRPS27Q92552 414 aaKnown RBP9.8□□□□□ -0.84
TRAF3-209ENST00000560463 ATG4CQ96DT6 458 aa9.8□□□□□ -0.84
TRAF3-209ENST00000560463 GPBP1L1Q9HC44 474 aaPredicted RBP9.8□□□□□ -0.84
TRAF3-209ENST00000560463 SLC45A1Q9Y2W3 748 aa9.8□□□□□ -0.84
TRAF3-209ENST00000560463 RABGAP1Q9Y3P9 1069 aa9.8□□□□□ -0.84
TRAF3-209ENST00000560463 SPDYE16A6NNV3 312 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 GCOM1H8Y6P7 765 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 OPLAHO14841 1288 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 CCNT1O60563 726 aaKnown RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 LETM1O95202 739 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 CFBP00751 764 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 POLR2MP0CAP2 368 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 CETPP11597 493 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 MARCKSP29966 332 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 HSD17B4P51659 736 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 IRX3P78415 501 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 FMR1Q06787 632 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 MAPK8IP2Q13387 824 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 ZNF174Q15697 407 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 UBE2SQ16763 222 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 TREML2Q5T2D2 321 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 USP17L6PQ6QN14 398 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 SAMD1Q6SPF0 538 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 CCDC73Q6ZRK6 1079 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 CCAR1Q8IX12 1150 aaKnown RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 GTF3C2Q8WUA4 911 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 WNK4Q96J92 1243 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 AGBL1Q96MI9 1066 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 ANO3Q9BYT9 981 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 RAVER2Q9HCJ3 691 aaKnown RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 DDX19AQ9NUU7 478 aaKnown RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 TMEM260Q9NX78 707 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 FBXO2Q9UK22 296 aaPredicted RBP9.79□□□□□ -0.84
TRAF3-209ENST00000560463 PNMA3Q9UL41 463 aa9.79□□□□□ -0.84
TRAF3-209ENST00000560463 CYP3A7-CYP3A51PA0A087WV96 503 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 FAM237AA0A1B0GTK4 181 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 NEMFO60524 1076 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 CYP3A4P08684 503 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 ALAS1P13196 640 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 OSBPP22059 807 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 CYP3A7P24462 503 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 MCM7P33993 719 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 COPB2P35606 906 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 LONP1P36776 959 aaKnown RBP9.78□□□□□ -0.84
TRAF3-209ENST00000560463 SREBF1P36956 1147 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 FAM160A1Q05DH4 1040 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 MOGSQ13724 837 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 LETM2Q2VYF4 491 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 CCDC183Q5T5S1 534 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 CST9Q5W186 159 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 RESP18Q5W5W9 173 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 CAVIN1Q6NZI2 390 aaKnown RBP9.78□□□□□ -0.84
TRAF3-209ENST00000560463 CPXCR1Q8N123 301 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 C4orf32Q8N8J7 132 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 CRYGNQ8WXF5 182 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 TRERF1Q96PN7 1200 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 TEX13BQ9BXU2 312 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 ZNF214Q9UL59 606 aaPredicted RBP9.78□□□□□ -0.84
TRAF3-209ENST00000560463 PASKQ96RG2 1323 aa9.78□□□□□ -0.84
TRAF3-209ENST00000560463 ZNF236Q9UL36 1845 aa9.77□□□□□ -0.84
TRAF3-209ENST00000560463 KAT6AQ92794 2004 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 WNT7AO00755 349 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 GJA5P36382 358 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 STAT3P40763 770 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 HUNKP57058 714 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 HERVK_113P62684 666 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 ARHGAP4P98171 946 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 TMEM132BQ14DG7 1078 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 SPRYD7Q5W111 196 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 SNRNP48Q6IEG0 339 aaKnown RBP9.77□□□□□ -0.85
TRAF3-209ENST00000560463 DTHD1Q6ZMT9 781 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 FSIP1Q8NA03 581 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 SMC1BQ8NDV3 1235 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 CHST13Q8NET6 341 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 ENGASEQ8NFI3 743 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 CLEC4DQ8WXI8 215 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 MS4A4AQ96JQ5 239 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 AK8Q96MA6 479 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 MBOAT7Q96N66 472 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 PYM1Q9BRP8 204 aaKnown RBP9.77□□□□□ -0.85
TRAF3-209ENST00000560463 ASCC2Q9H1I8 757 aaPredicted RBP9.77□□□□□ -0.85
TRAF3-209ENST00000560463 ACAD9Q9H845 621 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 FAM13BQ9NYF5 915 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 TMEM63CQ9P1W3 806 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 FBXO40Q9UH90 709 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 ARID2Q68CP9 1835 aa9.77□□□□□ -0.85
TRAF3-209ENST00000560463 CCL15-CCL14A0A0B4J2E2 113 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 A0A1B0GVL5 298 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 KIF3CO14782 793 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 TBX3O15119 743 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 CTAGE5O15320 804 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms