RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	TUBGCP2	Q9BSJ2	902 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	MAN1B1	Q9UKM7	699 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	RFX7	Q2KHR2	1363 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	IVL	P07476	585 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	ABCB4	P21439	1286 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	NT5C2	P49902	561 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	SLC27A3	Q5K4L6	730 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	TMTC3	Q6ZXV5	915 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	DAAM2	Q86T65	1068 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	NBPF11	Q86T75	865 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	FAM76A	Q8TAV0	307 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	CCDC127	Q96BQ5	260 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	NRBP2	Q9NSY0	501 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	SSX2IP	Q9Y2D8	614 aa		10.29	□□□□□ -0.76
NEO1-208	ENST00000560328	SCARF1	Q14162	830 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	DCP1A	Q9NPI6	582 aa	Predicted RBP	10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	RIPOR2	Q9Y4F9	1068 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	SAR1B	Q9Y6B6	198 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	AGL	P35573	1532 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	IKBKB	O14920	756 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	FER	P16591	822 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	CACNB1	Q02641	598 aa	Predicted RBP	10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	KCTD2	Q14681	263 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	LRRC41	Q15345	812 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	TMED8	Q6PL24	325 aa	Predicted RBP	10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	EPSTI1	Q96J88	318 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	FAM169A	Q9Y6X4	670 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	N4BP1	O75113	896 aa	Known RBP	10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	DLAT	P10515	647 aa	Known RBP	10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	ZNF658	Q5TYW1	1059 aa	Predicted RBP	10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	NRBP1	Q9UHY1	535 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	LRRIQ4	A6NIV6	560 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	PPM1F	P49593	454 aa	Predicted RBP	10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	TRIM58	Q8NG06	486 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	P2RX5	Q93086	422 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	WDR11	Q9BZH6	1224 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	P4HA1	P13674	534 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	CASP14	P31944	242 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	SNAP25	P60880	206 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	NFIX	Q14938	502 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	SMIM5	Q71RC9	77 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	FAM84B	Q96KN1	310 aa	Predicted RBP	10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	FAM204A	Q9H8W3	233 aa		10.28	□□□□□ -0.76
NEO1-208	ENST00000560328	KIDINS220	Q9ULH0	1771 aa		10.27	□□□□□ -0.76
NEO1-208	ENST00000560328		E7EVH7	732 aa		10.27	□□□□□ -0.76
NEO1-208	ENST00000560328	MEIS1	O00470	390 aa		10.27	□□□□□ -0.76
NEO1-208	ENST00000560328	DAPK3	O43293	454 aa		10.27	□□□□□ -0.76
NEO1-208	ENST00000560328	NMT2	O60551	498 aa		10.27	□□□□□ -0.76
NEO1-208	ENST00000560328	GPSM2	P81274	684 aa		10.27	□□□□□ -0.76
NEO1-208	ENST00000560328	TMEM179	Q6ZVK1	233 aa		10.27	□□□□□ -0.76
NEO1-208	ENST00000560328	CPLX4	Q7Z7G2	160 aa		10.27	□□□□□ -0.76
NEO1-208	ENST00000560328	ANKS4B	Q8N8V4	417 aa		10.27	□□□□□ -0.76
NEO1-208	ENST00000560328	TMEM47	Q9BQJ4	181 aa		10.27	□□□□□ -0.76
NEO1-208	ENST00000560328	STK17A	Q9UEE5	414 aa		10.27	□□□□□ -0.76
NEO1-208	ENST00000560328	GH2	P01242	217 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	YWHAE	P62258	255 aa	Known RBP	10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	FAM160B1	Q5W0V3	765 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	PODN	Q7Z5L7	613 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	PLA2G12B	Q9BX93	195 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	SH3GLB2	Q9NR46	395 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	ASIC3	Q9UHC3	531 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	AMFR	Q9UKV5	643 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	PLEKHG2	Q9H7P9	1386 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	RIMBP3C	A6NJZ7	1639 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	RIMBP3B	A6NNM3	1639 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	RIMBP3	Q9UFD9	1639 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	USP17L5	A8MUK1	530 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	GSG1L2	A8MUP6	293 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	NR2F2	P24468	414 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	ALX1	Q15699	326 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	ENAH	Q8N8S7	591 aa	Predicted RBP	10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	ATP6V0A1	Q93050	837 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	LY9	Q9HBG7	655 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	SPC25	Q9HBM1	224 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	C1orf112	Q9NSG2	853 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	CDC25B	P30305	580 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	EXOC3L4	Q17RC7	722 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	POMGNT1	Q8WZA1	660 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	PIM2	Q9P1W9	311 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	DIP2A	Q14689	1571 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	WDR19	Q8NEZ3	1342 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	BUB1	O43683	1085 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	ECE2	O60344	883 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	MYL1	P05976	194 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	PLCG1	P19174	1290 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	EEF1G	P26641	437 aa	Known RBP	10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	HOXA13	P31271	388 aa	Predicted RBP	10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	TXNRD1	Q16881	649 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	CCDC105	Q8IYK2	499 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	PPM1K	Q8N3J5	372 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	SLC44A5	Q8NCS7	719 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	PAGE5	Q96GU1	130 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	DNAJC5	Q9H3Z4	198 aa		10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	TDRD3	Q9H7E2	651 aa	Known RBP	10.27	□□□□□ -0.77
NEO1-208	ENST00000560328	ZNF500	O60304	480 aa	Predicted RBP	10.26	□□□□□ -0.77
NEO1-208	ENST00000560328	ARL1	P40616	181 aa	Predicted RBP	10.26	□□□□□ -0.77

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