RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 PUM1Q14671 1186 aaKnown RBP eCLIP7.51□□□□□ -1.21
CRNDE-208ENST00000560029 DCAF15Q66K64 600 aa7.51□□□□□ -1.21
CRNDE-208ENST00000560029 PRDM14Q9GZV8 571 aa7.51□□□□□ -1.21
CRNDE-208ENST00000560029 OSBPL2Q9H1P3 480 aa7.51□□□□□ -1.21
CRNDE-208ENST00000560029 SIRPGQ9P1W8 387 aa7.51□□□□□ -1.21
CRNDE-208ENST00000560029 TNFRSF10DQ9UBN6 386 aa7.51□□□□□ -1.21
CRNDE-208ENST00000560029 WTIPA6NIX2 430 aaPredicted RBP7.5□□□□□ -1.21
CRNDE-208ENST00000560029 EFEMP1Q12805 493 aa7.5□□□□□ -1.21
CRNDE-208ENST00000560029 NCAPHQ15003 741 aa7.5□□□□□ -1.21
CRNDE-208ENST00000560029 CCDC144BQ3MJ40 725 aa7.5□□□□□ -1.21
CRNDE-208ENST00000560029 SPATS1Q496A3 300 aa7.5□□□□□ -1.21
CRNDE-208ENST00000560029 MRM1Q6IN84 353 aaKnown RBP7.5□□□□□ -1.21
CRNDE-208ENST00000560029 NUP43Q8NFH3 380 aa7.5□□□□□ -1.21
CRNDE-208ENST00000560029 FCRL2Q96LA5 508 aaPredicted RBP7.5□□□□□ -1.21
CRNDE-208ENST00000560029 CDADC1Q9BWV3 514 aa7.5□□□□□ -1.21
CRNDE-208ENST00000560029 FBXL21Q9UKT6 434 aa7.5□□□□□ -1.21
CRNDE-208ENST00000560029 A0A1B0GTL3 188 aa7.49□□□□□ -1.21
CRNDE-208ENST00000560029 CEBPAP49715 358 aaPredicted RBP7.49□□□□□ -1.21
CRNDE-208ENST00000560029 SLURP1P55000 103 aa7.49□□□□□ -1.21
CRNDE-208ENST00000560029 AUHQ13825 339 aaKnown RBP7.49□□□□□ -1.21
CRNDE-208ENST00000560029 RPTNQ6XPR3 784 aa7.49□□□□□ -1.21
CRNDE-208ENST00000560029 SMARCC1Q92922 1105 aaPredicted RBP7.49□□□□□ -1.21
CRNDE-208ENST00000560029 HAUS7Q99871 368 aa7.49□□□□□ -1.21
CRNDE-208ENST00000560029 ZSWIM4Q9H7M6 989 aa7.49□□□□□ -1.21
CRNDE-208ENST00000560029 ERVK13-1Q9NX77 482 aa7.49□□□□□ -1.21
CRNDE-208ENST00000560029 CBFA2T2O43439 604 aa7.48□□□□□ -1.21
CRNDE-208ENST00000560029 SIGLEC6O43699 453 aa7.48□□□□□ -1.21
CRNDE-208ENST00000560029 EPHX1P07099 455 aa7.48□□□□□ -1.21
CRNDE-208ENST00000560029 KCNC1P48547 511 aa7.48□□□□□ -1.21
CRNDE-208ENST00000560029 ZNF200P98182 395 aaPredicted RBP7.48□□□□□ -1.21
CRNDE-208ENST00000560029 LAPTM5Q13571 262 aa7.48□□□□□ -1.21
CRNDE-208ENST00000560029 BMS1Q14692 1282 aaKnown RBP7.48□□□□□ -1.21
CRNDE-208ENST00000560029 HEATR6Q6AI08 1181 aaKnown RBP7.48□□□□□ -1.21
CRNDE-208ENST00000560029 SLCO6A1Q86UG4 719 aa7.48□□□□□ -1.21
CRNDE-208ENST00000560029 C7orf61Q8IZ16 206 aa7.48□□□□□ -1.21
CRNDE-208ENST00000560029 BORCS6Q96GS4 357 aa7.48□□□□□ -1.21
CRNDE-208ENST00000560029 FGD4Q96M96 766 aa7.48□□□□□ -1.21
CRNDE-208ENST00000560029 CHST7Q9NS84 486 aa7.48□□□□□ -1.21
CRNDE-208ENST00000560029 IMPACTQ9P2X3 320 aa7.48□□□□□ -1.21
CRNDE-208ENST00000560029 ZNF451Q9Y4E5 1061 aa7.48□□□□□ -1.21
CRNDE-208ENST00000560029 PCDHB12Q9Y5F1 795 aa7.48□□□□□ -1.21
CRNDE-208ENST00000560029 SHOXO15266 292 aa7.47□□□□□ -1.21
CRNDE-208ENST00000560029 ADAT2Q7Z6V5 191 aaKnown RBP7.47□□□□□ -1.21
CRNDE-208ENST00000560029 FERMT3Q86UX7 667 aa7.47□□□□□ -1.21
CRNDE-208ENST00000560029 SRPK1Q96SB4 655 aaKnown RBP7.47□□□□□ -1.21
CRNDE-208ENST00000560029 TNFRSF12AQ9NP84 129 aa7.47□□□□□ -1.21
CRNDE-208ENST00000560029 PLA2G2DQ9UNK4 145 aa7.47□□□□□ -1.21
CRNDE-208ENST00000560029 MSRB2Q9Y3D2 182 aa7.47□□□□□ -1.21
CRNDE-208ENST00000560029 HCFC2Q9Y5Z7 792 aa7.47□□□□□ -1.21
CRNDE-208ENST00000560029 FAM221BA6H8Z2 402 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 SUSD5O60279 629 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 CD247P20963 164 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 CTSKP43235 329 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 PLEKHN1Q494U1 663 aaPredicted RBP7.46□□□□□ -1.22
CRNDE-208ENST00000560029 ANKRD39Q53RE8 183 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 HHIPL2Q6UWX4 724 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 TMEM52Q8NDY8 209 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 DEPDC7Q96QD5 511 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 JMJD8Q96S16 334 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 KLHL25Q9H0H3 589 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 PIF1Q9H611 641 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 GP6Q9HCN6 339 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 AP5S1Q9NUS5 200 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 GFOD1Q9NXC2 390 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 SNTG2Q9NY99 539 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 SUSD2Q9UGT4 822 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 ACSL6Q9UKU0 697 aa7.46□□□□□ -1.22
CRNDE-208ENST00000560029 CDK11AQ9UQ88 783 aaPredicted RBP7.46□□□□□ -1.22
CRNDE-208ENST00000560029 ANKRD34BA5PLL1 514 aa7.45□□□□□ -1.22
CRNDE-208ENST00000560029 PDPK1O15530 556 aa7.45□□□□□ -1.22
CRNDE-208ENST00000560029 MSL3P1P0C860 447 aa7.45□□□□□ -1.22
CRNDE-208ENST00000560029 TMEM62Q0P6H9 643 aa7.45□□□□□ -1.22
CRNDE-208ENST00000560029 RASA3Q14644 834 aa7.45□□□□□ -1.22
CRNDE-208ENST00000560029 CBX2Q14781 532 aaPredicted RBP7.45□□□□□ -1.22
CRNDE-208ENST00000560029 TCEAL1Q15170 157 aa7.45□□□□□ -1.22
CRNDE-208ENST00000560029 EEPD1Q7L9B9 569 aa7.45□□□□□ -1.22
CRNDE-208ENST00000560029 ADCY4Q8NFM4 1077 aa7.45□□□□□ -1.22
CRNDE-208ENST00000560029 BRF1Q92994 677 aa7.45□□□□□ -1.22
CRNDE-208ENST00000560029 GPR20Q99678 358 aa7.45□□□□□ -1.22
CRNDE-208ENST00000560029 CCDC113Q9H0I3 377 aa7.45□□□□□ -1.22
CRNDE-208ENST00000560029 ITGA4P13612 1032 aa7.44□□□□□ -1.22
CRNDE-208ENST00000560029 IGFBP6P24592 240 aaPredicted RBP7.44□□□□□ -1.22
CRNDE-208ENST00000560029 ZNF445P59923 1031 aa7.44□□□□□ -1.22
CRNDE-208ENST00000560029 NOL9Q5SY16 702 aaKnown RBP7.44□□□□□ -1.22
CRNDE-208ENST00000560029 UBXN11Q5T124 520 aa7.44□□□□□ -1.22
CRNDE-208ENST00000560029 CRTC3Q6UUV7 619 aa7.44□□□□□ -1.22
CRNDE-208ENST00000560029 MKL1Q969V6 931 aa7.44□□□□□ -1.22
CRNDE-208ENST00000560029 APBA2Q99767 749 aa7.44□□□□□ -1.22
CRNDE-208ENST00000560029 SPATA25Q9BR10 227 aa7.44□□□□□ -1.22
CRNDE-208ENST00000560029 LGR4Q9BXB1 951 aa7.44□□□□□ -1.22
CRNDE-208ENST00000560029 GBP3Q9H0R5 595 aa7.44□□□□□ -1.22
CRNDE-208ENST00000560029 APEX2Q9UBZ4 518 aa7.44□□□□□ -1.22
CRNDE-208ENST00000560029 A0A1W2PQ45 241 aaPredicted RBP7.43□□□□□ -1.22
CRNDE-208ENST00000560029 A0A1W2PQY0 241 aa7.43□□□□□ -1.22
CRNDE-208ENST00000560029 PLA2G1BP04054 148 aaKnown RBP7.43□□□□□ -1.22
CRNDE-208ENST00000560029 VAV1P15498 845 aa7.43□□□□□ -1.22
CRNDE-208ENST00000560029 NFE2L2Q16236 605 aa7.43□□□□□ -1.22
CRNDE-208ENST00000560029 SLC10A6Q3KNW5 377 aa7.43□□□□□ -1.22
CRNDE-208ENST00000560029 SV2CQ496J9 727 aa7.43□□□□□ -1.22
CRNDE-208ENST00000560029 NT5DC1Q5TFE4 455 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms