RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 KIAA1217Q5T5P2 1943 aa13.13□□□□□ -0.31
HERC1-204ENST00000559715 TRIOO75962 3097 aa13.13□□□□□ -0.31
HERC1-204ENST00000559715 TCF20Q9UGU0 1960 aaKnown RBP13.12□□□□□ -0.31
HERC1-204ENST00000559715 A0A0D9SFI3 127 aa13.12□□□□□ -0.31
HERC1-204ENST00000559715 TSPY2A6NKD2 308 aa13.12□□□□□ -0.31
HERC1-204ENST00000559715 TLR3O15455 904 aaKnown RBP13.12□□□□□ -0.31
HERC1-204ENST00000559715 SLC3A2P08195 630 aaKnown RBP13.12□□□□□ -0.31
HERC1-204ENST00000559715 CCL23P55773 120 aa13.12□□□□□ -0.31
HERC1-204ENST00000559715 LRRFIP1Q32MZ4 808 aaKnown RBP13.12□□□□□ -0.31
HERC1-204ENST00000559715 DCAF4Q8WV16 495 aa13.12□□□□□ -0.31
HERC1-204ENST00000559715 FAM227BQ96M60 508 aa13.12□□□□□ -0.31
HERC1-204ENST00000559715 ALDH8A1Q9H2A2 487 aaPredicted RBP13.12□□□□□ -0.31
HERC1-204ENST00000559715 VTA1Q9NP79 307 aa13.12□□□□□ -0.31
HERC1-204ENST00000559715 TCP11L1Q9NUJ3 509 aa13.12□□□□□ -0.31
HERC1-204ENST00000559715 CCPG1Q9ULG6 757 aa13.12□□□□□ -0.31
HERC1-204ENST00000559715 TANC1Q9C0D5 1861 aa13.12□□□□□ -0.31
HERC1-204ENST00000559715 RANBP6O60518 1105 aaKnown RBP13.11□□□□□ -0.31
HERC1-204ENST00000559715 FGBP02675 491 aa13.11□□□□□ -0.31
HERC1-204ENST00000559715 SNHG28P0DPA3 235 aa13.11□□□□□ -0.31
HERC1-204ENST00000559715 MYOGP15173 224 aa13.11□□□□□ -0.31
HERC1-204ENST00000559715 EDNRBP24530 442 aa13.11□□□□□ -0.31
HERC1-204ENST00000559715 ALDH5A1P51649 535 aaPredicted RBP13.11□□□□□ -0.31
HERC1-204ENST00000559715 PDE1AP54750 535 aa13.11□□□□□ -0.31
HERC1-204ENST00000559715 PURAQ00577 322 aaKnown RBP13.11□□□□□ -0.31
HERC1-204ENST00000559715 TJAP1Q5JTD0 557 aa13.11□□□□□ -0.31
HERC1-204ENST00000559715 NSMFQ6X4W1 530 aa13.11□□□□□ -0.31
HERC1-204ENST00000559715 OTOP2Q7RTS6 562 aa13.11□□□□□ -0.31
HERC1-204ENST00000559715 ZNF589Q86UQ0 364 aaPredicted RBP13.11□□□□□ -0.31
HERC1-204ENST00000559715 SEZ6LQ9BYH1 1024 aa13.11□□□□□ -0.31
HERC1-204ENST00000559715 TRMT13Q9NUP7 481 aaKnown RBP13.11□□□□□ -0.31
HERC1-204ENST00000559715 MYH6P13533 1939 aa13.1□□□□□ -0.31
HERC1-204ENST00000559715 RBAK-RBAKDNI3L0D1 243 aa13.1□□□□□ -0.31
HERC1-204ENST00000559715 PDHBP11177 359 aa13.1□□□□□ -0.31
HERC1-204ENST00000559715 RABGGTBP53611 331 aa13.1□□□□□ -0.31
HERC1-204ENST00000559715 IKQ13123 557 aaPredicted RBP13.1□□□□□ -0.31
HERC1-204ENST00000559715 SYDE2Q5VT97 1194 aa13.1□□□□□ -0.31
HERC1-204ENST00000559715 SLC30A10Q6XR72 485 aa13.1□□□□□ -0.31
HERC1-204ENST00000559715 KIAA1211Q6ZU35 1233 aa13.1□□□□□ -0.31
HERC1-204ENST00000559715 NOL8Q76FK4 1167 aaKnown RBP13.1□□□□□ -0.31
HERC1-204ENST00000559715 SCLYQ96I15 445 aa13.1□□□□□ -0.31
HERC1-204ENST00000559715 CTAGE1Q96RT6 745 aa13.1□□□□□ -0.31
HERC1-204ENST00000559715 AP5M1Q9H0R1 490 aa13.1□□□□□ -0.31
HERC1-204ENST00000559715 NKX2-4Q9H2Z4 354 aa13.1□□□□□ -0.31
HERC1-204ENST00000559715 HELLSQ9NRZ9 838 aa13.1□□□□□ -0.31
HERC1-204ENST00000559715 LAMA4Q16363 1823 aa13.1□□□□□ -0.31
HERC1-204ENST00000559715 LOC102724159A0A0B4J2E5 919 aa13.09□□□□□ -0.31
HERC1-204ENST00000559715 HSPD1P10809 573 aaKnown RBP13.09□□□□□ -0.31
HERC1-204ENST00000559715 TOP1P11387 765 aaKnown RBP13.09□□□□□ -0.31
HERC1-204ENST00000559715 CYP2C9P11712 490 aa13.09□□□□□ -0.31
HERC1-204ENST00000559715 TTLL4Q14679 1199 aa13.09□□□□□ -0.31
HERC1-204ENST00000559715 GPNMBQ14956 572 aa13.09□□□□□ -0.31
HERC1-204ENST00000559715 PWP2Q15269 919 aaKnown RBP13.09□□□□□ -0.31
HERC1-204ENST00000559715 PPP4R3BQ5MIZ7 849 aa13.09□□□□□ -0.31
HERC1-204ENST00000559715 PPP1R13LQ8WUF5 828 aa13.09□□□□□ -0.31
HERC1-204ENST00000559715 SYMPKQ92797 1274 aaKnown RBP13.09□□□□□ -0.31
HERC1-204ENST00000559715 EVI5LQ96CN4 794 aa13.09□□□□□ -0.31
HERC1-204ENST00000559715 WDR11Q9BZH6 1224 aa13.09□□□□□ -0.31
HERC1-204ENST00000559715 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
HERC1-204ENST00000559715 MYH7BA7E2Y1 1941 aa13.09□□□□□ -0.31
HERC1-204ENST00000559715 ZMYM6O95789 1325 aa13.09□□□□□ -0.31
HERC1-204ENST00000559715 FRMPD2Q68DX3 1309 aaPredicted RBP13.09□□□□□ -0.31
HERC1-204ENST00000559715 A6NJR5 290 aa13.08□□□□□ -0.32
HERC1-204ENST00000559715 ARHGEF15O94989 841 aa13.08□□□□□ -0.32
HERC1-204ENST00000559715 ARIH2O95376 493 aa13.08□□□□□ -0.32
HERC1-204ENST00000559715 RPS6P62753 249 aaKnown RBP13.08□□□□□ -0.32
HERC1-204ENST00000559715 ZNF543Q08ER8 600 aa13.08□□□□□ -0.32
HERC1-204ENST00000559715 RAB30Q15771 203 aa13.08□□□□□ -0.32
HERC1-204ENST00000559715 TBC1D10CQ8IV04 446 aa13.08□□□□□ -0.32
HERC1-204ENST00000559715 ATXN2LQ8WWM7 1075 aaKnown RBP13.08□□□□□ -0.32
HERC1-204ENST00000559715 TBC1D5Q92609 795 aa13.08□□□□□ -0.32
HERC1-204ENST00000559715 COPS5Q92905 334 aa13.08□□□□□ -0.32
HERC1-204ENST00000559715 ASB2Q96Q27 587 aa13.08□□□□□ -0.32
HERC1-204ENST00000559715 GPCPD1Q9NPB8 672 aa13.08□□□□□ -0.32
HERC1-204ENST00000559715 ISY1Q9ULR0 285 aaKnown RBP13.08□□□□□ -0.32
HERC1-204ENST00000559715 C5orf42Q9H799 3197 aa13.08□□□□□ -0.32
HERC1-204ENST00000559715 TNKSO95271 1327 aa13.08□□□□□ -0.32
HERC1-204ENST00000559715 POU3F3P20264 500 aaPredicted RBP13.07□□□□□ -0.32
HERC1-204ENST00000559715 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
HERC1-204ENST00000559715 NBPF20Q3BBV1 942 aa13.07□□□□□ -0.32
HERC1-204ENST00000559715 MCMDC2Q4G0Z9 681 aa13.07□□□□□ -0.32
HERC1-204ENST00000559715 ANKRD45Q5TZF3 282 aa13.07□□□□□ -0.32
HERC1-204ENST00000559715 CCDC62Q6P9F0 684 aa13.07□□□□□ -0.32
HERC1-204ENST00000559715 TICAM2Q86XR7 235 aa13.07□□□□□ -0.32
HERC1-204ENST00000559715 PPM1EQ8WY54 764 aa13.07□□□□□ -0.32
HERC1-204ENST00000559715 TTC14Q96N46 770 aa13.07□□□□□ -0.32
HERC1-204ENST00000559715 GAS2L1Q99501 681 aaPredicted RBP13.07□□□□□ -0.32
HERC1-204ENST00000559715 CPVLQ9H3G5 476 aa13.07□□□□□ -0.32
HERC1-204ENST00000559715 ADD3Q9UEY8 706 aaKnown RBP13.07□□□□□ -0.32
HERC1-204ENST00000559715 MSRAQ9UJ68 235 aa13.07□□□□□ -0.32
HERC1-204ENST00000559715 WDR19Q8NEZ3 1342 aa13.07□□□□□ -0.32
HERC1-204ENST00000559715 EPOPA6NHQ4 379 aa13.06□□□□□ -0.32
HERC1-204ENST00000559715 TNFRSF10AO00220 468 aa13.06□□□□□ -0.32
HERC1-204ENST00000559715 ZEB2O60315 1214 aa13.06□□□□□ -0.32
HERC1-204ENST00000559715 HAND2P61296 217 aa13.06□□□□□ -0.32
HERC1-204ENST00000559715 NMIQ13287 307 aaPredicted RBP13.06□□□□□ -0.32
HERC1-204ENST00000559715 HDAC1Q13547 482 aaPredicted RBP13.06□□□□□ -0.32
HERC1-204ENST00000559715 CCDC85BQ15834 202 aaPredicted RBP13.06□□□□□ -0.32
HERC1-204ENST00000559715 RNF207Q6ZRF8 634 aa13.06□□□□□ -0.32
HERC1-204ENST00000559715 MTG1Q9BT17 334 aaPredicted RBP13.06□□□□□ -0.32
HERC1-204ENST00000559715 SLC28A3Q9HAS3 691 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms