RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 P2RX7Q99572 595 aaKnown RBP14.36□□□□□ -0.11
USP3-213ENST00000559711 DISC1Q9NRI5 854 aa14.36□□□□□ -0.11
USP3-213ENST00000559711 FBXO28Q9NVF7 368 aa14.36□□□□□ -0.11
USP3-213ENST00000559711 SMC2O95347 1197 aa14.35□□□□□ -0.11
USP3-213ENST00000559711 PTPRAP18433 802 aa14.35□□□□□ -0.11
USP3-213ENST00000559711 CDC25AP30304 524 aa14.35□□□□□ -0.11
USP3-213ENST00000559711 MORC3Q14149 939 aa14.35□□□□□ -0.11
USP3-213ENST00000559711 PDIA5Q14554 519 aa14.35□□□□□ -0.11
USP3-213ENST00000559711 HS1BP3Q53T59 392 aa14.35□□□□□ -0.11
USP3-213ENST00000559711 NOL9Q5SY16 702 aaKnown RBP14.35□□□□□ -0.11
USP3-213ENST00000559711 PRPF38AQ8NAV1 312 aaKnown RBP14.35□□□□□ -0.11
USP3-213ENST00000559711 AS3MTQ9HBK9 375 aa14.35□□□□□ -0.11
USP3-213ENST00000559711 EMILIN3Q9NT22 766 aa14.35□□□□□ -0.11
USP3-213ENST00000559711 MAN1B1Q9UKM7 699 aa14.35□□□□□ -0.11
USP3-213ENST00000559711 MRPL11Q9Y3B7 192 aaKnown RBP14.35□□□□□ -0.11
USP3-213ENST00000559711 SBF1O95248 1867 aa14.34□□□□□ -0.11
USP3-213ENST00000559711 PP2D1A8MPX8 630 aa14.34□□□□□ -0.11
USP3-213ENST00000559711 BECN2A8MW95 431 aa14.34□□□□□ -0.11
USP3-213ENST00000559711 GOLGA6L19H0YKK7 550 aa14.34□□□□□ -0.11
USP3-213ENST00000559711 BMP6P22004 513 aa14.34□□□□□ -0.11
USP3-213ENST00000559711 SREBF1P36956 1147 aa14.34□□□□□ -0.11
USP3-213ENST00000559711 BACE1P56817 501 aa14.34□□□□□ -0.11
USP3-213ENST00000559711 DPYDQ12882 1025 aa14.34□□□□□ -0.11
USP3-213ENST00000559711 KARSQ15046 597 aaKnown RBP14.34□□□□□ -0.11
USP3-213ENST00000559711 ZKSCAN4Q969J2 545 aaPredicted RBP14.34□□□□□ -0.11
USP3-213ENST00000559711 L3MBTL3Q96JM7 780 aaPredicted RBP14.34□□□□□ -0.11
USP3-213ENST00000559711 SLF1Q9BQI6 1058 aa14.34□□□□□ -0.11
USP3-213ENST00000559711 PICK1Q9NRD5 415 aa14.34□□□□□ -0.11
USP3-213ENST00000559711 CCDC39Q9UFE4 941 aa14.34□□□□□ -0.11
USP3-213ENST00000559711 DDX25Q9UHL0 483 aaKnown RBP14.34□□□□□ -0.11
USP3-213ENST00000559711 ABCB11O95342 1321 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 SPDYE3A6NKU9 549 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 IKBKBO14920 756 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 TECP42680 631 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 TXKP42681 527 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 AFMP43652 599 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 ARHGAP4P98171 946 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 SPP2Q13103 211 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 MTMR2Q13614 643 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 NAALADL2Q58DX5 795 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 RRAGBQ5VZM2 374 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 ISM2Q6H9L7 571 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 CCDC174Q6PII3 467 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 SARM1Q6SZW1 724 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 CABP7Q86V35 215 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 LDHDQ86WU2 507 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 MLKLQ8NB16 471 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 ZNF280CQ8ND82 737 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 HAS1Q92839 578 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 TRIM44Q96DX7 344 aaPredicted RBP14.33□□□□□ -0.11
USP3-213ENST00000559711 GSDMAQ96QA5 445 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 MTRQ99707 1265 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 CUEDC2Q9H467 287 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 SSC5DA1L4H1 1573 aa14.33□□□□□ -0.11
USP3-213ENST00000559711 GTPBP6O43824 516 aaPredicted RBP14.33□□□□□ -0.12
USP3-213ENST00000559711 ICAM1P05362 532 aa14.33□□□□□ -0.12
USP3-213ENST00000559711 CYP3A4P08684 503 aa14.33□□□□□ -0.12
USP3-213ENST00000559711 TAL1P17542 331 aaPredicted RBP14.33□□□□□ -0.12
USP3-213ENST00000559711 VCAM1P19320 739 aa14.33□□□□□ -0.12
USP3-213ENST00000559711 CIITAP33076 1130 aa14.33□□□□□ -0.12
USP3-213ENST00000559711 STAT6P42226 847 aa14.33□□□□□ -0.12
USP3-213ENST00000559711 TMEM266Q2M3C6 531 aa14.33□□□□□ -0.12
USP3-213ENST00000559711 DPY19L2Q6NUT2 758 aa14.33□□□□□ -0.12
USP3-213ENST00000559711 ILDR2Q71H61 639 aa14.33□□□□□ -0.12
USP3-213ENST00000559711 AOPEPQ8N6M6 819 aa14.33□□□□□ -0.12
USP3-213ENST00000559711 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.33□□□□□ -0.12
USP3-213ENST00000559711 DCPSQ96C86 337 aaKnown RBP14.33□□□□□ -0.12
USP3-213ENST00000559711 C12orf42Q96LP6 360 aa14.33□□□□□ -0.12
USP3-213ENST00000559711 MMTAG2Q9BU76 263 aaKnown RBP14.33□□□□□ -0.12
USP3-213ENST00000559711 KCNMB3Q9NPA1 279 aa14.33□□□□□ -0.12
USP3-213ENST00000559711 ZNF536O15090 1300 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 SRCAPQ6ZRS2 3230 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 SMTNL1A8MU46 457 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 GCOM1H8Y6P7 765 aaPredicted RBP14.32□□□□□ -0.12
USP3-213ENST00000559711 USP2O75604 605 aaPredicted RBP14.32□□□□□ -0.12
USP3-213ENST00000559711 POLR2MP0CAP2 368 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 FDX1P10109 184 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 PLCB2Q00722 1185 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 NCAPHQ15003 741 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 Q4G0T1 1027 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 CT47A1Q5JQC4 288 aaPredicted RBP14.32□□□□□ -0.12
USP3-213ENST00000559711 RAB34Q9BZG1 259 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 MAGEF1Q9HAY2 307 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 SLC38A10Q9HBR0 1119 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 LRWD1Q9UFC0 647 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 PPP1R9AQ9ULJ8 1098 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 ZHX2Q9Y6X8 837 aa14.32□□□□□ -0.12
USP3-213ENST00000559711 ZC3H4Q9UPT8 1303 aaKnown RBP14.31□□□□□ -0.12
USP3-213ENST00000559711 C19orf81C9J6K1 198 aa14.31□□□□□ -0.12
USP3-213ENST00000559711 MYL1P05976 194 aa14.31□□□□□ -0.12
USP3-213ENST00000559711 HOXA13P31271 388 aaPredicted RBP14.31□□□□□ -0.12
USP3-213ENST00000559711 PLA2G4DQ86XP0 818 aa14.31□□□□□ -0.12
USP3-213ENST00000559711 SULF1Q8IWU6 871 aa14.31□□□□□ -0.12
USP3-213ENST00000559711 TBC1D5Q92609 795 aa14.31□□□□□ -0.12
USP3-213ENST00000559711 RPAP3Q9H6T3 665 aaPredicted RBP14.31□□□□□ -0.12
USP3-213ENST00000559711 TTC12Q9H892 705 aaPredicted RBP14.31□□□□□ -0.12
USP3-213ENST00000559711 KBTBD4Q9NVX7 518 aa14.31□□□□□ -0.12
USP3-213ENST00000559711 PNMA2Q9UL42 364 aa14.31□□□□□ -0.12
USP3-213ENST00000559711 FZD1Q9UP38 647 aa14.31□□□□□ -0.12
USP3-213ENST00000559711 TBX3O15119 743 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms