RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 SYDE2Q5VT97 1194 aa15.45■□□□□ 0.06
TPM1-220ENST00000559556 EEPD1Q7L9B9 569 aa15.45■□□□□ 0.06
TPM1-220ENST00000559556 USP38Q8NB14 1042 aa15.45■□□□□ 0.06
TPM1-220ENST00000559556 HERVK_113Q902F9 699 aa15.45■□□□□ 0.06
TPM1-220ENST00000559556 NOC4LQ9BVI4 516 aaKnown RBP15.45■□□□□ 0.06
TPM1-220ENST00000559556 HIPK3Q9H422 1215 aa15.45■□□□□ 0.06
TPM1-220ENST00000559556 TCP11L1Q9NUJ3 509 aa15.45■□□□□ 0.06
TPM1-220ENST00000559556 ADD3Q9UEY8 706 aaKnown RBP15.45■□□□□ 0.06
TPM1-220ENST00000559556 ZBTB47Q9UFB7 747 aaPredicted RBP15.45■□□□□ 0.06
TPM1-220ENST00000559556 MTMR7Q9Y216 660 aa15.45■□□□□ 0.06
TPM1-220ENST00000559556 UMODL1Q5DID0 1318 aa15.44■□□□□ 0.06
TPM1-220ENST00000559556 GRXCR1A8MXD5 290 aa15.44■□□□□ 0.06
TPM1-220ENST00000559556 NFIBO00712 420 aa15.44■□□□□ 0.06
TPM1-220ENST00000559556 DYNC1LI2O43237 492 aaPredicted RBP15.44■□□□□ 0.06
TPM1-220ENST00000559556 B4GALT4O60513 344 aa15.44■□□□□ 0.06
TPM1-220ENST00000559556 SLC16A2P36021 539 aa15.44■□□□□ 0.06
TPM1-220ENST00000559556 ALDH5A1P51649 535 aaPredicted RBP15.44■□□□□ 0.06
TPM1-220ENST00000559556 DUSP28Q4G0W2 176 aa15.44■□□□□ 0.06
TPM1-220ENST00000559556 TMEM63BQ5T3F8 832 aa15.44■□□□□ 0.06
TPM1-220ENST00000559556 ANKRD45Q5TZF3 282 aa15.44■□□□□ 0.06
TPM1-220ENST00000559556 TTBK2Q6IQ55 1244 aa15.44■□□□□ 0.06
TPM1-220ENST00000559556 FAM227BQ96M60 508 aa15.44■□□□□ 0.06
TPM1-220ENST00000559556 PURBQ96QR8 312 aaKnown RBP15.44■□□□□ 0.06
TPM1-220ENST00000559556 TMEM47Q9BQJ4 181 aa15.44■□□□□ 0.06
TPM1-220ENST00000559556 ATG2AQ2TAZ0 1938 aa15.44■□□□□ 0.06
TPM1-220ENST00000559556 RBM47A0AV96 593 aaKnown RBP15.43■□□□□ 0.06
TPM1-220ENST00000559556 HSPD1P10809 573 aaKnown RBP15.43■□□□□ 0.06
TPM1-220ENST00000559556 PDHBP11177 359 aa15.43■□□□□ 0.06
TPM1-220ENST00000559556 HDAC1Q13547 482 aaPredicted RBP15.43■□□□□ 0.06
TPM1-220ENST00000559556 BAATQ14032 418 aaPredicted RBP15.43■□□□□ 0.06
TPM1-220ENST00000559556 RAB30Q15771 203 aa15.43■□□□□ 0.06
TPM1-220ENST00000559556 MCMDC2Q4G0Z9 681 aa15.43■□□□□ 0.06
TPM1-220ENST00000559556 KIAA1211Q6ZU35 1233 aa15.43■□□□□ 0.06
TPM1-220ENST00000559556 ZNF589Q86UQ0 364 aaPredicted RBP15.43■□□□□ 0.06
TPM1-220ENST00000559556 GAS2L1Q99501 681 aaPredicted RBP15.43■□□□□ 0.06
TPM1-220ENST00000559556 TRPV6Q9H1D0 765 aa15.43■□□□□ 0.06
TPM1-220ENST00000559556 WNT8AQ9H1J5 351 aa15.43■□□□□ 0.06
TPM1-220ENST00000559556 MTIF3Q9H2K0 278 aaKnown RBP15.43■□□□□ 0.06
TPM1-220ENST00000559556 TOMM22Q9NS69 142 aa15.43■□□□□ 0.06
TPM1-220ENST00000559556 CXXC1Q9P0U4 656 aaPredicted RBP15.43■□□□□ 0.06
TPM1-220ENST00000559556 FRMPD2Q68DX3 1309 aaPredicted RBP15.43■□□□□ 0.06
TPM1-220ENST00000559556 CCDC171Q6TFL3 1326 aa15.43■□□□□ 0.06
TPM1-220ENST00000559556 WDR19Q8NEZ3 1342 aa15.43■□□□□ 0.06
TPM1-220ENST00000559556 SNHG28P0DPA3 235 aa15.42■□□□□ 0.06
TPM1-220ENST00000559556 PCP11498 1178 aaKnown RBP15.42■□□□□ 0.06
TPM1-220ENST00000559556 PSMC6P62333 389 aa15.42■□□□□ 0.06
TPM1-220ENST00000559556 RRP12Q5JTH9 1297 aaKnown RBP15.42■□□□□ 0.06
TPM1-220ENST00000559556 SLC30A10Q6XR72 485 aa15.42■□□□□ 0.06
TPM1-220ENST00000559556 CLEC4DQ8WXI8 215 aa15.42■□□□□ 0.06
TPM1-220ENST00000559556 SYMPKQ92797 1274 aaKnown RBP15.42■□□□□ 0.06
TPM1-220ENST00000559556 ALDH8A1Q9H2A2 487 aaPredicted RBP15.42■□□□□ 0.06
TPM1-220ENST00000559556 POLR3EQ9NVU0 708 aa15.42■□□□□ 0.06
TPM1-220ENST00000559556 PNMA2Q9UL42 364 aa15.42■□□□□ 0.06
TPM1-220ENST00000559556 PTPDC1A2A3K4 754 aa15.41■□□□□ 0.06
TPM1-220ENST00000559556 FGBP02675 491 aa15.41■□□□□ 0.06
TPM1-220ENST00000559556 CPT1AP50416 773 aa15.41■□□□□ 0.06
TPM1-220ENST00000559556 PURAQ00577 322 aaKnown RBP15.41■□□□□ 0.06
TPM1-220ENST00000559556 ZNF543Q08ER8 600 aa15.41■□□□□ 0.06
TPM1-220ENST00000559556 NMIQ13287 307 aaPredicted RBP15.41■□□□□ 0.06
TPM1-220ENST00000559556 AKNAD1Q5T1N1 836 aa15.41■□□□□ 0.06
TPM1-220ENST00000559556 VWCEQ96DN2 955 aa15.41■□□□□ 0.06
TPM1-220ENST00000559556 TTC14Q96N46 770 aa15.41■□□□□ 0.06
TPM1-220ENST00000559556 CRBNQ96SW2 442 aa15.41■□□□□ 0.06
TPM1-220ENST00000559556 WDR11Q9BZH6 1224 aa15.41■□□□□ 0.06
TPM1-220ENST00000559556 PRDM12Q9H4Q4 367 aa15.41■□□□□ 0.06
TPM1-220ENST00000559556 GPCPD1Q9NPB8 672 aa15.41■□□□□ 0.06
TPM1-220ENST00000559556 MSRAQ9UJ68 235 aa15.41■□□□□ 0.06
TPM1-220ENST00000559556 RALGAPA2Q2PPJ7 1873 aa15.41■□□□□ 0.06
TPM1-220ENST00000559556 EDNRBP24530 442 aa15.4■□□□□ 0.06
TPM1-220ENST00000559556 CCL23P55773 120 aa15.4■□□□□ 0.06
TPM1-220ENST00000559556 HAND2P61296 217 aa15.4■□□□□ 0.06
TPM1-220ENST00000559556 TJAP1Q5JTD0 557 aa15.4■□□□□ 0.06
TPM1-220ENST00000559556 OTOP2Q7RTS6 562 aa15.4■□□□□ 0.06
TPM1-220ENST00000559556 DNERQ8NFT8 737 aa15.4■□□□□ 0.06
TPM1-220ENST00000559556 TNKSO95271 1327 aa15.4■□□□□ 0.06
TPM1-220ENST00000559556 WDR81Q562E7 1941 aa15.39■□□□□ 0.05
TPM1-220ENST00000559556 NKRFO15226 690 aaKnown RBP eCLIP15.39■□□□□ 0.051e-6■■□□□ 14
TPM1-220ENST00000559556 RPS6P62753 249 aaKnown RBP15.39■□□□□ 0.05
TPM1-220ENST00000559556 RNF207Q6ZRF8 634 aa15.39■□□□□ 0.05
TPM1-220ENST00000559556 MFSD6Q6ZSS7 791 aa15.39■□□□□ 0.05
TPM1-220ENST00000559556 TBC1D10CQ8IV04 446 aa15.39■□□□□ 0.05
TPM1-220ENST00000559556 RPUSD2Q8IZ73 545 aaKnown RBP15.39■□□□□ 0.05
TPM1-220ENST00000559556 OR6J1Q8NGC5 347 aa15.39■□□□□ 0.05
TPM1-220ENST00000559556 YBX2Q9Y2T7 364 aaKnown RBP15.39■□□□□ 0.05
TPM1-220ENST00000559556 NEDD4P46934 1319 aa15.39■□□□□ 0.05
TPM1-220ENST00000559556 RAD50Q92878 1312 aa15.39■□□□□ 0.05
TPM1-220ENST00000559556 MYO7AQ13402 2215 aa15.38■□□□□ 0.05
TPM1-220ENST00000559556 PFKMP08237 780 aa15.38■□□□□ 0.05
TPM1-220ENST00000559556 SUPT20HL2P0C7V6 817 aa15.38■□□□□ 0.05
TPM1-220ENST00000559556 CALML3P27482 149 aa15.38■□□□□ 0.05
TPM1-220ENST00000559556 MFAP1P55081 439 aaKnown RBP15.38■□□□□ 0.05
TPM1-220ENST00000559556 PDE4DQ08499 809 aa15.38■□□□□ 0.05
TPM1-220ENST00000559556 PPP2R5BQ15173 497 aa15.38■□□□□ 0.05
TPM1-220ENST00000559556 GPATCH4Q5T3I0 446 aaKnown RBP15.38■□□□□ 0.05
TPM1-220ENST00000559556 SCFD2Q8WU76 684 aa15.38■□□□□ 0.05
TPM1-220ENST00000559556 SCLYQ96I15 445 aa15.38■□□□□ 0.05
TPM1-220ENST00000559556 MPHOSPH6Q99547 160 aaKnown RBP15.38■□□□□ 0.05
TPM1-220ENST00000559556 MTG1Q9BT17 334 aaPredicted RBP15.38■□□□□ 0.05
TPM1-220ENST00000559556 NKX2-4Q9H2Z4 354 aa15.38■□□□□ 0.05
TPM1-220ENST00000559556 RNF41Q9H4P4 317 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms