RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 SLC35G1Q2M3R5 365 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 USH1GQ495M9 461 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 TTC22Q5TAA0 569 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 NOL8Q76FK4 1167 aaKnown RBP15.92■□□□□ 0.14
VPS18-203ENST00000558855 CYB5R4Q7L1T6 521 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 PCSK9Q8NBP7 692 aaKnown RBP15.92■□□□□ 0.14
VPS18-203ENST00000558855 PNMA1Q8ND90 353 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 SLC17A8Q8NDX2 589 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 ESR2Q92731 530 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 COPS5Q92905 334 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 VWCEQ96DN2 955 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 TTC14Q96N46 770 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.92■□□□□ 0.148e-7■■■■■ 32.7
VPS18-203ENST00000558855 COL20A1Q9P218 1284 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 A0A0C4DFX4 3053 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 TNKSO95271 1327 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 WDR19Q8NEZ3 1342 aa15.92■□□□□ 0.14
VPS18-203ENST00000558855 DCDC2CA8MYV0 355 aa15.91■□□□□ 0.14
VPS18-203ENST00000558855 TIMP1P01033 207 aa15.91■□□□□ 0.14
VPS18-203ENST00000558855 PCP11498 1178 aaKnown RBP15.91■□□□□ 0.14
VPS18-203ENST00000558855 CYP2C18P33260 490 aa15.91■□□□□ 0.14
VPS18-203ENST00000558855 PTH1RQ03431 593 aa15.91■□□□□ 0.14
VPS18-203ENST00000558855 FSCN1Q16658 493 aaKnown RBP15.91■□□□□ 0.14
VPS18-203ENST00000558855 RNPC3Q96LT9 517 aaKnown RBP15.91■□□□□ 0.14
VPS18-203ENST00000558855 RNF41Q9H4P4 317 aaPredicted RBP15.91■□□□□ 0.14
VPS18-203ENST00000558855 SENP2Q9HC62 589 aa15.91■□□□□ 0.14
VPS18-203ENST00000558855 VTA1Q9NP79 307 aa15.91■□□□□ 0.14
VPS18-203ENST00000558855 BAZ2BQ9UIF8 2168 aaKnown RBP15.91■□□□□ 0.14
VPS18-203ENST00000558855 DOCK5Q9H7D0 1870 aa15.91■□□□□ 0.14
VPS18-203ENST00000558855 RBM47A0AV96 593 aaKnown RBP15.9■□□□□ 0.14
VPS18-203ENST00000558855 ARIH2O95376 493 aa15.9■□□□□ 0.14
VPS18-203ENST00000558855 ACRP10323 421 aa15.9■□□□□ 0.14
VPS18-203ENST00000558855 CSF2RAP15509 400 aa15.9■□□□□ 0.14
VPS18-203ENST00000558855 EDNRBP24530 442 aa15.9■□□□□ 0.14
VPS18-203ENST00000558855 MFAP1P55081 439 aaKnown RBP15.9■□□□□ 0.14
VPS18-203ENST00000558855 COL9A3Q14050 684 aaPredicted RBP15.9■□□□□ 0.14
VPS18-203ENST00000558855 SEC23AQ15436 765 aa15.9■□□□□ 0.14
VPS18-203ENST00000558855 CDC37Q16543 378 aaPredicted RBP15.9■□□□□ 0.14
VPS18-203ENST00000558855 KIAA1211Q6ZU35 1233 aa15.9■□□□□ 0.14
VPS18-203ENST00000558855 DGKHQ86XP1 1220 aa15.9■□□□□ 0.14
VPS18-203ENST00000558855 ADGRF4Q8IZF3 695 aa15.9■□□□□ 0.14
VPS18-203ENST00000558855 STAG2Q8N3U4 1231 aa15.9■□□□□ 0.14
VPS18-203ENST00000558855 ANKS1AQ92625 1134 aa15.9■□□□□ 0.14
VPS18-203ENST00000558855 VTI1AQ96AJ9 217 aa15.9■□□□□ 0.14
VPS18-203ENST00000558855 ZSCAN10Q96SZ4 725 aaPredicted RBP15.9■□□□□ 0.14
VPS18-203ENST00000558855 TRPV6Q9H1D0 765 aa15.9■□□□□ 0.14
VPS18-203ENST00000558855 SPC25Q9HBM1 224 aa15.9■□□□□ 0.14
VPS18-203ENST00000558855 GRXCR1A8MXD5 290 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 OPLAHO14841 1288 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 B4GALT4O60513 344 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 PPP1R11O60927 126 aaPredicted RBP15.89■□□□□ 0.13
VPS18-203ENST00000558855 SMAD3P84022 425 aaKnown RBP15.89■□□□□ 0.13
VPS18-203ENST00000558855 ITGA7Q13683 1181 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 DUSP28Q4G0W2 176 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 TMEM240Q5SV17 173 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 IQSEC1Q6DN90 963 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 MFSD5Q6N075 450 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 RNF207Q6ZRF8 634 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 MYLIPQ8WY64 445 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 CDX2Q99626 313 aaPredicted RBP15.89■□□□□ 0.13
VPS18-203ENST00000558855 WNT8AQ9H1J5 351 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 SEMA6BQ9H3T3 888 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 REV3LO60673 3130 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 CHD7Q9P2D1 2997 aa15.89■□□□□ 0.13
VPS18-203ENST00000558855 TRIP12Q14669 1992 aaPredicted RBP15.88■□□□□ 0.13
VPS18-203ENST00000558855 QRICH1Q2TAL8 776 aa15.88■□□□□ 0.13
VPS18-203ENST00000558855 GPATCH4Q5T3I0 446 aaKnown RBP15.88■□□□□ 0.13
VPS18-203ENST00000558855 ZNF697Q5TEC3 545 aa15.88■□□□□ 0.13
VPS18-203ENST00000558855 STOX1Q6ZVD7 989 aa15.88■□□□□ 0.13
VPS18-203ENST00000558855 SKAP1Q86WV1 359 aa15.88■□□□□ 0.13
VPS18-203ENST00000558855 WDR11Q9BZH6 1224 aa15.88■□□□□ 0.13
VPS18-203ENST00000558855 AP5M1Q9H0R1 490 aa15.88■□□□□ 0.13
VPS18-203ENST00000558855 JMJD4Q9H9V9 463 aa15.88■□□□□ 0.13
VPS18-203ENST00000558855 CYP21A2P08686 494 aa15.87■□□□□ 0.13
VPS18-203ENST00000558855 CHMLP26374 656 aa15.87■□□□□ 0.13
VPS18-203ENST00000558855 PBX2P40425 430 aa15.87■□□□□ 0.13
VPS18-203ENST00000558855 IMMTQ16891 758 aaKnown RBP15.87■□□□□ 0.13
VPS18-203ENST00000558855 RASIP1Q5U651 963 aa15.87■□□□□ 0.13
VPS18-203ENST00000558855 TET1Q8NFU7 2136 aa15.87■□□□□ 0.13
VPS18-203ENST00000558855 TAAR1Q96RJ0 339 aa15.87■□□□□ 0.13
VPS18-203ENST00000558855 KAT14Q9H8E8 782 aa15.87■□□□□ 0.13
VPS18-203ENST00000558855 CXXC1Q9P0U4 656 aaPredicted RBP15.87■□□□□ 0.13
VPS18-203ENST00000558855 MROH7Q68CQ1 1323 aa15.87■□□□□ 0.13
VPS18-203ENST00000558855 HIP1O00291 1037 aa15.86■□□□□ 0.13
VPS18-203ENST00000558855 CCL23P55773 120 aa15.86■□□□□ 0.13
VPS18-203ENST00000558855 PURAQ00577 322 aaKnown RBP15.86■□□□□ 0.13
VPS18-203ENST00000558855 ZNF365Q70YC5 407 aa15.86■□□□□ 0.13
VPS18-203ENST00000558855 IQCA1Q86XH1 822 aa15.86■□□□□ 0.13
VPS18-203ENST00000558855 OR6J1Q8NGC5 347 aa15.86■□□□□ 0.13
VPS18-203ENST00000558855 SYTL5Q8TDW5 730 aaPredicted RBP15.86■□□□□ 0.13
VPS18-203ENST00000558855 NOC4LQ9BVI4 516 aaKnown RBP15.86■□□□□ 0.13
VPS18-203ENST00000558855 VAT1LQ9HCJ6 419 aa15.86■□□□□ 0.13
VPS18-203ENST00000558855 TRMT13Q9NUP7 481 aaKnown RBP15.86■□□□□ 0.13
VPS18-203ENST00000558855 ADD3Q9UEY8 706 aaKnown RBP15.86■□□□□ 0.13
VPS18-203ENST00000558855 Q9Y3F1 56 aa15.86■□□□□ 0.13
VPS18-203ENST00000558855 CYP2C9P11712 490 aa15.85■□□□□ 0.13
VPS18-203ENST00000558855 DNAJB2P25686 324 aa15.85■□□□□ 0.13
VPS18-203ENST00000558855 ASPRV1Q53RT3 343 aa15.85■□□□□ 0.13
VPS18-203ENST00000558855 SCLYQ96I15 445 aa15.85■□□□□ 0.13
VPS18-203ENST00000558855 MAD2L2Q9UI95 211 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms