RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 TAPT1Q6NXT6 567 aa13.55□□□□□ -0.24
CASC4-205ENST00000558735 ADAMTS19Q8TE59 1207 aa13.55□□□□□ -0.24
CASC4-205ENST00000558735 MORC4Q8TE76 937 aa13.55□□□□□ -0.24
CASC4-205ENST00000558735 CLEC4DQ8WXI8 215 aa13.55□□□□□ -0.24
CASC4-205ENST00000558735 VTI1AQ96AJ9 217 aa13.55□□□□□ -0.24
CASC4-205ENST00000558735 GLT1D1Q96MS3 346 aa13.55□□□□□ -0.24
CASC4-205ENST00000558735 ZKSCAN3Q9BRR0 538 aa13.55□□□□□ -0.24
CASC4-205ENST00000558735 RNF41Q9H4P4 317 aaPredicted RBP13.55□□□□□ -0.24
CASC4-205ENST00000558735 SPC25Q9HBM1 224 aa13.55□□□□□ -0.24
CASC4-205ENST00000558735 MCM3APO60318 1980 aa13.54□□□□□ -0.24
CASC4-205ENST00000558735 ARVCFO00192 962 aa13.54□□□□□ -0.24
CASC4-205ENST00000558735 NFIBO00712 420 aa13.54□□□□□ -0.24
CASC4-205ENST00000558735 DYNC1LI2O43237 492 aaPredicted RBP13.54□□□□□ -0.24
CASC4-205ENST00000558735 SMPD1P17405 629 aa13.54□□□□□ -0.24
CASC4-205ENST00000558735 PBX2P40425 430 aa13.54□□□□□ -0.24
CASC4-205ENST00000558735 BEX3Q00994 111 aa13.54□□□□□ -0.24
CASC4-205ENST00000558735 ADGRE1Q14246 886 aa13.54□□□□□ -0.24
CASC4-205ENST00000558735 PSRC1Q6PGN9 363 aaPredicted RBP13.54□□□□□ -0.24
CASC4-205ENST00000558735 NOL8Q76FK4 1167 aaKnown RBP13.54□□□□□ -0.24
CASC4-205ENST00000558735 EEPD1Q7L9B9 569 aa13.54□□□□□ -0.24
CASC4-205ENST00000558735 DGKHQ86XP1 1220 aa13.54□□□□□ -0.24
CASC4-205ENST00000558735 ESR2Q92731 530 aa13.54□□□□□ -0.24
CASC4-205ENST00000558735 DIAPH3Q9NSV4 1193 aa13.54□□□□□ -0.24
CASC4-205ENST00000558735 ZSWIM5Q9P217 1185 aa13.54□□□□□ -0.24
CASC4-205ENST00000558735 NEDD4P46934 1319 aa13.54□□□□□ -0.24
CASC4-205ENST00000558735 PDE4AP27815 886 aa13.53□□□□□ -0.24
CASC4-205ENST00000558735 RAB30Q15771 203 aa13.53□□□□□ -0.24
CASC4-205ENST00000558735 TMEM199Q8N511 208 aa13.53□□□□□ -0.24
CASC4-205ENST00000558735 HERVK_113Q902F9 699 aa13.53□□□□□ -0.24
CASC4-205ENST00000558735 ANKS1AQ92625 1134 aa13.53□□□□□ -0.24
CASC4-205ENST00000558735 DSCC1Q9BVC3 393 aa13.53□□□□□ -0.24
CASC4-205ENST00000558735 UBA5Q9GZZ9 404 aa13.53□□□□□ -0.24
CASC4-205ENST00000558735 PRDM12Q9H4Q4 367 aa13.53□□□□□ -0.24
CASC4-205ENST00000558735 ARIH1Q9Y4X5 557 aaPredicted RBP13.53□□□□□ -0.24
CASC4-205ENST00000558735 GRXCR1A8MXD5 290 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 B4E1Z4 1266 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 HIP1O00291 1037 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 KDM4AO75164 1064 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 GOLGA8HP0CJ92 632 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 CSF2RAP15509 400 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 CXCL17Q6UXB2 119 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 KIAA1211Q6ZU35 1233 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 ZNF365Q70YC5 407 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 FBXO16Q8IX29 292 aaPredicted RBP13.52□□□□□ -0.25
CASC4-205ENST00000558735 FAM126BQ8IXS8 530 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 SLC43A3Q8NBI5 491 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 UHRF1Q96T88 793 aaPredicted RBP13.52□□□□□ -0.25
CASC4-205ENST00000558735 IL25Q9H293 177 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 CPVLQ9H3G5 476 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 CXXC1Q9P0U4 656 aaPredicted RBP13.52□□□□□ -0.25
CASC4-205ENST00000558735 ADD3Q9UEY8 706 aaKnown RBP13.52□□□□□ -0.25
CASC4-205ENST00000558735 Q9Y3F1 56 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 GRIN2DO15399 1336 aa13.52□□□□□ -0.25
CASC4-205ENST00000558735 A0A0U1RQG5 324 aaPredicted RBP13.51□□□□□ -0.25
CASC4-205ENST00000558735 PTPDC1A2A3K4 754 aa13.51□□□□□ -0.25
CASC4-205ENST00000558735 CD4P01730 458 aa13.51□□□□□ -0.25
CASC4-205ENST00000558735 ALDH5A1P51649 535 aaPredicted RBP13.51□□□□□ -0.25
CASC4-205ENST00000558735 RPS6P62753 249 aaKnown RBP13.51□□□□□ -0.25
CASC4-205ENST00000558735 FSCN1Q16658 493 aaKnown RBP13.51□□□□□ -0.25
CASC4-205ENST00000558735 CCDC178Q5BJE1 867 aa13.51□□□□□ -0.25
CASC4-205ENST00000558735 GPATCH4Q5T3I0 446 aaKnown RBP13.51□□□□□ -0.25
CASC4-205ENST00000558735 TLK2Q86UE8 772 aa13.51□□□□□ -0.25
CASC4-205ENST00000558735 ZSCAN10Q96SZ4 725 aaPredicted RBP13.51□□□□□ -0.25
CASC4-205ENST00000558735 AP5M1Q9H0R1 490 aa13.51□□□□□ -0.25
CASC4-205ENST00000558735 VTA1Q9NP79 307 aa13.51□□□□□ -0.25
CASC4-205ENST00000558735 IL23AQ9NPF7 189 aa13.51□□□□□ -0.25
CASC4-205ENST00000558735 RAPGEFL1Q9UHV5 662 aa13.51□□□□□ -0.25
CASC4-205ENST00000558735 MSRAQ9UJ68 235 aa13.51□□□□□ -0.25
CASC4-205ENST00000558735 WDR19Q8NEZ3 1342 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 LOC102724159A0A0B4J2E5 919 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 RBM47A0AV96 593 aaKnown RBP13.5□□□□□ -0.25
CASC4-205ENST00000558735 BMP1P13497 986 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 CALML3P27482 149 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 NT5C2P49902 561 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 PWP2Q15269 919 aaKnown RBP13.5□□□□□ -0.25
CASC4-205ENST00000558735 IMMTQ16891 758 aaKnown RBP13.5□□□□□ -0.25
CASC4-205ENST00000558735 DUSP28Q4G0W2 176 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 RNF207Q6ZRF8 634 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 IQCA1Q86XH1 822 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 ENAHQ8N8S7 591 aaPredicted RBP13.5□□□□□ -0.25
CASC4-205ENST00000558735 PNMA1Q8ND90 353 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 TBC1D5Q92609 795 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 FAM122AQ96E09 287 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 SEZ6LQ9BYH1 1024 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 CTNNA3Q9UI47 895 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 PNMA2Q9UL42 364 aa13.5□□□□□ -0.25
CASC4-205ENST00000558735 TLR3O15455 904 aaKnown RBP13.49□□□□□ -0.25
CASC4-205ENST00000558735 CABYRO75952 493 aa13.49□□□□□ -0.25
CASC4-205ENST00000558735 GSPT1P15170 499 aaKnown RBP13.49□□□□□ -0.25
CASC4-205ENST00000558735 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
CASC4-205ENST00000558735 ITGA7Q13683 1181 aa13.49□□□□□ -0.25
CASC4-205ENST00000558735 TTC22Q5TAA0 569 aa13.49□□□□□ -0.25
CASC4-205ENST00000558735 SLC30A10Q6XR72 485 aa13.49□□□□□ -0.25
CASC4-205ENST00000558735 ADGRF4Q8IZF3 695 aa13.49□□□□□ -0.25
CASC4-205ENST00000558735 RGS22Q8NE09 1264 aa13.49□□□□□ -0.25
CASC4-205ENST00000558735 PPM1EQ8WY54 764 aa13.49□□□□□ -0.25
CASC4-205ENST00000558735 C1QTNF1Q9BXJ1 281 aa13.49□□□□□ -0.25
CASC4-205ENST00000558735 WDR11Q9BZH6 1224 aa13.49□□□□□ -0.25
CASC4-205ENST00000558735 MTIF3Q9H2K0 278 aaKnown RBP13.49□□□□□ -0.25
CASC4-205ENST00000558735 ZEB2O60315 1214 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms