RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 TCP11Q8WWU5 503 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 C15orf41Q9Y2V0 281 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 FRMD3A2A2Y4 597 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 CFAP73A6NFT4 308 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 PES1O00541 588 aaKnown RBP12.41□□□□□ -0.42
PCAT29-201ENST00000558411 PPP1R12BO60237 982 aaPredicted RBP12.41□□□□□ -0.42
PCAT29-201ENST00000558411 IBSPP21815 317 aaPredicted RBP12.41□□□□□ -0.42
PCAT29-201ENST00000558411 KCNB1Q14721 858 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 PPP2R5BQ15173 497 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 UBE3CQ15386 1083 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 MAATS1Q7Z4T9 603 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 DHX37Q8IY37 1157 aaKnown RBP12.41□□□□□ -0.42
PCAT29-201ENST00000558411 TMTC2Q8N394 836 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 SMCR8Q8TEV9 937 aaPredicted RBP12.41□□□□□ -0.42
PCAT29-201ENST00000558411 LMBR1Q8WVP7 490 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 SAAL1Q96ER3 474 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 ERGIC2Q96RQ1 377 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 MTRQ99707 1265 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 RNF26Q9BY78 433 aaPredicted RBP12.41□□□□□ -0.42
PCAT29-201ENST00000558411 KRT23Q9C075 422 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 TAF1DQ9H5J8 278 aaPredicted RBP12.41□□□□□ -0.42
PCAT29-201ENST00000558411 MLXIPQ9HAP2 919 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 ETAA1Q9NY74 926 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 SWAP70Q9UH65 585 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 AMOTL2Q9Y2J4 779 aa12.41□□□□□ -0.42
PCAT29-201ENST00000558411 COL22A1Q8NFW1 1626 aaPredicted RBP12.4□□□□□ -0.42
PCAT29-201ENST00000558411 MYH10P35580 1976 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 B4DLN1 442 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 ORC4O43929 436 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 RPSAP08865 295 aaKnown RBP12.4□□□□□ -0.42
PCAT29-201ENST00000558411 SNRPA1P09661 255 aaKnown RBP12.4□□□□□ -0.42
PCAT29-201ENST00000558411 RWDD2BP57060 319 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 PPP2R2AP63151 447 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 MRPS25P82663 173 aaKnown RBP12.4□□□□□ -0.42
PCAT29-201ENST00000558411 QPCTQ16769 361 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 FAM114A1Q8IWE2 563 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 NSMCE1Q8WV22 266 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 CASKIN2Q8WXE0 1202 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 IFT81Q8WYA0 676 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 LRRC59Q96AG4 307 aaKnown RBP12.4□□□□□ -0.42
PCAT29-201ENST00000558411 LRRC45Q96CN5 670 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 SPDL1Q96EA4 605 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 SPAG5Q96R06 1193 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 TUBGCP2Q9BSJ2 902 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 TLR10Q9BXR5 811 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 ZSWIM5Q9P217 1185 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 PLAGL2Q9UPG8 496 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 TRPC6Q9Y210 931 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 GDAQ9Y2T3 454 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 NUP188Q5SRE5 1749 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 AKAP11Q9UKA4 1901 aa12.4□□□□□ -0.42
PCAT29-201ENST00000558411 H0YGN5 161 aa12.4□□□□□ -0.43
PCAT29-201ENST00000558411 PSMA7O14818 248 aa12.4□□□□□ -0.43
PCAT29-201ENST00000558411 MYL1P05976 194 aa12.4□□□□□ -0.43
PCAT29-201ENST00000558411 MYBP10242 640 aa12.4□□□□□ -0.43
PCAT29-201ENST00000558411 HPDP32754 393 aaPredicted RBP12.4□□□□□ -0.43
PCAT29-201ENST00000558411 ACCSLQ4AC99 568 aa12.4□□□□□ -0.43
PCAT29-201ENST00000558411 BZW1Q7L1Q6 419 aaKnown RBP12.4□□□□□ -0.43
PCAT29-201ENST00000558411 ZSCAN29Q8IWY8 852 aaPredicted RBP12.4□□□□□ -0.43
PCAT29-201ENST00000558411 STAMQ92783 540 aa12.4□□□□□ -0.43
PCAT29-201ENST00000558411 RBM33Q96EV2 1170 aaKnown RBP12.4□□□□□ -0.43
PCAT29-201ENST00000558411 PHF20Q9BVI0 1012 aa12.4□□□□□ -0.43
PCAT29-201ENST00000558411 SLC52A2Q9HAB3 445 aa12.4□□□□□ -0.43
PCAT29-201ENST00000558411 POLD4Q9HCU8 107 aa12.4□□□□□ -0.43
PCAT29-201ENST00000558411 NFS1Q9Y697 457 aa12.4□□□□□ -0.43
PCAT29-201ENST00000558411 EID1Q9Y6B2 187 aa12.4□□□□□ -0.43
PCAT29-201ENST00000558411 CCT8L1PA6NM43 557 aa12.39□□□□□ -0.43
PCAT29-201ENST00000558411 OPLAHO14841 1288 aa12.39□□□□□ -0.43
PCAT29-201ENST00000558411 ADORA1P30542 326 aa12.39□□□□□ -0.43
PCAT29-201ENST00000558411 GUCY2FP51841 1108 aa12.39□□□□□ -0.43
PCAT29-201ENST00000558411 KIF11P52732 1056 aa12.39□□□□□ -0.43
PCAT29-201ENST00000558411 CUL1Q13616 776 aa12.39□□□□□ -0.43
PCAT29-201ENST00000558411 SCARF1Q14162 830 aa12.39□□□□□ -0.43
PCAT29-201ENST00000558411 RBBP5Q15291 538 aaKnown RBP12.39□□□□□ -0.43
PCAT29-201ENST00000558411 KLHDC7AQ5VTJ3 777 aa12.39□□□□□ -0.43
PCAT29-201ENST00000558411 RAPGEF5Q92565 580 aa12.39□□□□□ -0.43
PCAT29-201ENST00000558411 CENPTQ96BT3 561 aa12.39□□□□□ -0.43
PCAT29-201ENST00000558411 DHTKD1Q96HY7 919 aaPredicted RBP12.39□□□□□ -0.43
PCAT29-201ENST00000558411 ZNF512BQ96KM6 892 aaPredicted RBP12.39□□□□□ -0.43
PCAT29-201ENST00000558411 TRIM47Q96LD4 638 aa12.39□□□□□ -0.43
PCAT29-201ENST00000558411 NOX5Q96PH1 765 aa12.39□□□□□ -0.43
PCAT29-201ENST00000558411 CNOT10Q9H9A5 744 aaKnown RBP12.39□□□□□ -0.43
PCAT29-201ENST00000558411 CWC25Q9NXE8 425 aaPredicted RBP12.39□□□□□ -0.43
PCAT29-201ENST00000558411 CORO1CQ9ULV4 474 aaPredicted RBP12.39□□□□□ -0.43
PCAT29-201ENST00000558411 SLC12A4Q9UP95 1085 aa12.39□□□□□ -0.43
PCAT29-201ENST00000558411 TRIM49BA6NDI0 452 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 TRIM37O94972 964 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 DRD4P21917 467 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 CXCR5P32302 372 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 MTMR3Q13615 1198 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 WTAPQ15007 396 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 TTC38Q5R3I4 469 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 TTI2Q6NXR4 508 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 KRT26Q7Z3Y9 468 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 CCDC26Q8TAB7 109 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 MOV10L1Q9BXT6 1211 aaKnown RBP12.38□□□□□ -0.43
PCAT29-201ENST00000558411 ISCUQ9H1K1 167 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 KIF9Q9HAQ2 790 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 SMARCAL1Q9NZC9 954 aa12.38□□□□□ -0.43
PCAT29-201ENST00000558411 EHD2Q9NZN4 543 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms