RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 RAPGEF1Q13905 1077 aa8.76□□□□□ -1.01
ZEB1-210ENST00000557827 SAFBQ15424 915 aaKnown RBP eCLIP8.76□□□□□ -1.01
ZEB1-210ENST00000557827 DPY19L1Q2PZI1 675 aa8.76□□□□□ -1.01
ZEB1-210ENST00000557827 RGL3Q3MIN7 710 aa8.76□□□□□ -1.01
ZEB1-210ENST00000557827 ACBD5Q5T8D3 534 aaPredicted RBP8.76□□□□□ -1.01
ZEB1-210ENST00000557827 PGM2L1Q6PCE3 622 aa8.76□□□□□ -1.01
ZEB1-210ENST00000557827 ARMCX6Q7L4S7 300 aa8.76□□□□□ -1.01
ZEB1-210ENST00000557827 TRIM47Q96LD4 638 aa8.76□□□□□ -1.01
ZEB1-210ENST00000557827 LRGUKQ96M69 825 aa8.76□□□□□ -1.01
ZEB1-210ENST00000557827 FBXL18Q96ME1 805 aa8.76□□□□□ -1.01
ZEB1-210ENST00000557827 ZFYVE21Q9BQ24 234 aa8.76□□□□□ -1.01
ZEB1-210ENST00000557827 PHF20Q9BVI0 1012 aa8.76□□□□□ -1.01
ZEB1-210ENST00000557827 SF3B6Q9Y3B4 125 aaKnown RBP8.76□□□□□ -1.01
ZEB1-210ENST00000557827 FRMPD2Q68DX3 1309 aaPredicted RBP8.76□□□□□ -1.01
ZEB1-210ENST00000557827 KRBA1A5PL33 1030 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 M0R082 166 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 DLL1O00548 723 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 CFBP00751 764 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 CKMP06732 381 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 ITIH2P19823 946 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 KPNA1P52294 538 aaPredicted RBP8.75□□□□□ -1.01
ZEB1-210ENST00000557827 SESN3P58005 492 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 GPR85P60893 370 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 SCRN1Q12765 414 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 FAM83BQ5T0W9 1011 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 RSPO2Q6UXX9 243 aaPredicted RBP8.75□□□□□ -1.01
ZEB1-210ENST00000557827 ILDR2Q71H61 639 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 CLRN3Q8NCR9 226 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 ZNF417Q8TAU3 575 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 HSPBAP1Q96EW2 488 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 AIFM3Q96NN9 605 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 ZNF587Q96SQ5 575 aaPredicted RBP8.75□□□□□ -1.01
ZEB1-210ENST00000557827 NAP1L4Q99733 375 aaKnown RBP8.75□□□□□ -1.01
ZEB1-210ENST00000557827 ELAC2Q9BQ52 826 aaKnown RBP8.75□□□□□ -1.01
ZEB1-210ENST00000557827 ASPNQ9BXN1 380 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.75□□□□□ -1.01
ZEB1-210ENST00000557827 MAN1C1Q9NR34 630 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 ATG3Q9NT62 314 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 C14orf119Q9NWQ9 140 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 DDX20Q9UHI6 824 aaKnown RBP8.75□□□□□ -1.01
ZEB1-210ENST00000557827 FAM50BQ9Y247 325 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 WASHC2AQ641Q2 1341 aa8.75□□□□□ -1.01
ZEB1-210ENST00000557827 MEGF11A6BM72 1044 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 SRGAP2CP0DJJ0 459 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 ADH5P11766 374 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 SERPINB3P29508 390 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 SNW1Q13573 536 aaKnown RBP8.74□□□□□ -1.01
ZEB1-210ENST00000557827 DUOXA2Q1HG44 320 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 TMEM95Q3KNT9 176 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 NUTM2GQ5VZR2 741 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 ZNF787Q6DD87 383 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 ERAP2Q6P179 960 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 DYMQ7RTS9 669 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 CDH24Q86UP0 819 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.74□□□□□ -1.01
ZEB1-210ENST00000557827 DMRTC2Q8IXT2 367 aaPredicted RBP8.74□□□□□ -1.01
ZEB1-210ENST00000557827 PPIL6Q8IXY8 311 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 CMTR2Q8IYT2 770 aaKnown RBP8.74□□□□□ -1.01
ZEB1-210ENST00000557827 PIDD1Q9HB75 910 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 GFOD1Q9NXC2 390 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 PRR13Q9NZ81 148 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 SAP30BPQ9UHR5 308 aaKnown RBP8.74□□□□□ -1.01
ZEB1-210ENST00000557827 PUF60Q9UHX1 559 aaKnown RBP8.74□□□□□ -1.01
ZEB1-210ENST00000557827 NPFFR2Q9Y5X5 522 aa8.74□□□□□ -1.01
ZEB1-210ENST00000557827 DEAF1O75398 565 aaPredicted RBP8.73□□□□□ -1.01
ZEB1-210ENST00000557827 ASGR2P07307 311 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 EPXP11678 715 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 MECP2P51608 486 aaKnown RBP8.73□□□□□ -1.01
ZEB1-210ENST00000557827 KRT85P78386 507 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 POU5F1BQ06416 359 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 GALEQ14376 348 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 TMEM177Q53S58 311 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 GPR158Q5T848 1215 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 LETMD1Q6P1Q0 360 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 CLEC4GQ6UXB4 293 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 SLCO4C1Q6ZQN7 724 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 SMYD4Q8IYR2 804 aaPredicted RBP8.73□□□□□ -1.01
ZEB1-210ENST00000557827 GOLGA6L1Q8N7Z2 621 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 CHST14Q8NCH0 376 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 PCDH19Q8TAB3 1148 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.73□□□□□ -1.01
ZEB1-210ENST00000557827 RNF141Q8WVD5 230 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 TTC17Q96AE7 1141 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 NUP88Q99567 741 aaPredicted RBP8.73□□□□□ -1.01
ZEB1-210ENST00000557827 CELF4Q9BZC1 486 aaKnown RBP8.73□□□□□ -1.01
ZEB1-210ENST00000557827 GSX1Q9H4S2 264 aaPredicted RBP8.73□□□□□ -1.01
ZEB1-210ENST00000557827 MBIPQ9NS73 344 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 MKS1Q9NXB0 559 aa8.73□□□□□ -1.01
ZEB1-210ENST00000557827 BCCIPQ9P287 314 aaKnown RBP eCLIP8.73□□□□□ -1.01
ZEB1-210ENST00000557827 ARNTLO00327 626 aa8.72□□□□□ -1.01
ZEB1-210ENST00000557827 TBX3O15119 743 aa8.72□□□□□ -1.01
ZEB1-210ENST00000557827 PCDHGA12O60330 932 aa8.72□□□□□ -1.01
ZEB1-210ENST00000557827 SOD2P04179 222 aa8.72□□□□□ -1.01
ZEB1-210ENST00000557827 THBDP07204 575 aa8.72□□□□□ -1.01
ZEB1-210ENST00000557827 DRD2P14416 443 aa8.72□□□□□ -1.01
ZEB1-210ENST00000557827 VCAM1P19320 739 aa8.72□□□□□ -1.01
ZEB1-210ENST00000557827 ASPAP45381 313 aa8.72□□□□□ -1.01
ZEB1-210ENST00000557827 ZNF280AP59817 542 aaPredicted RBP8.72□□□□□ -1.01
ZEB1-210ENST00000557827 SOX4Q06945 474 aaPredicted RBP8.72□□□□□ -1.01
ZEB1-210ENST00000557827 CYB5RLQ6IPT4 315 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms