RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 ZNF792Q3KQV3 632 aa13.39□□□□□ -0.27
LINC00648-204ENST00000557749 CENPQQ7L2Z9 268 aaPredicted RBP13.39□□□□□ -0.27
LINC00648-204ENST00000557749 MPHOSPH6Q99547 160 aaKnown RBP13.39□□□□□ -0.27
LINC00648-204ENST00000557749 TMEM47Q9BQJ4 181 aa13.39□□□□□ -0.27
LINC00648-204ENST00000557749 UBAC1Q9BSL1 405 aa13.39□□□□□ -0.27
LINC00648-204ENST00000557749 RAVER2Q9HCJ3 691 aaKnown RBP13.39□□□□□ -0.27
LINC00648-204ENST00000557749 MKI67P46013 3256 aaKnown RBP13.39□□□□□ -0.27
LINC00648-204ENST00000557749 LOC102724159A0A0B4J2E5 919 aa13.38□□□□□ -0.27
LINC00648-204ENST00000557749 A0A1W2PPC1 479 aa13.38□□□□□ -0.27
LINC00648-204ENST00000557749 H0YGN5 161 aa13.38□□□□□ -0.27
LINC00648-204ENST00000557749 AKR1A1P14550 325 aa13.38□□□□□ -0.27
LINC00648-204ENST00000557749 IRX6P78412 446 aaPredicted RBP13.38□□□□□ -0.27
LINC00648-204ENST00000557749 PWP2Q15269 919 aaKnown RBP13.38□□□□□ -0.27
LINC00648-204ENST00000557749 MAMDC4Q6UXC1 1216 aa13.38□□□□□ -0.27
LINC00648-204ENST00000557749 BTNL9Q6UXG8 535 aa13.38□□□□□ -0.27
LINC00648-204ENST00000557749 KAT14Q9H8E8 782 aa13.38□□□□□ -0.27
LINC00648-204ENST00000557749 GPCPD1Q9NPB8 672 aa13.38□□□□□ -0.27
LINC00648-204ENST00000557749 DNAJC25-GNG10A0A024R161 153 aa13.37□□□□□ -0.27
LINC00648-204ENST00000557749 ASB14A6NK59 587 aa13.37□□□□□ -0.27
LINC00648-204ENST00000557749 NMT2O60551 498 aa13.37□□□□□ -0.27
LINC00648-204ENST00000557749 ICAM1P05362 532 aa13.37□□□□□ -0.27
LINC00648-204ENST00000557749 COL6A1P12109 1028 aa13.37□□□□□ -0.27
LINC00648-204ENST00000557749 GSPT1P15170 499 aaKnown RBP13.37□□□□□ -0.27
LINC00648-204ENST00000557749 SART3Q15020 963 aaKnown RBP13.37□□□□□ -0.27
LINC00648-204ENST00000557749 SYDE2Q5VT97 1194 aa13.37□□□□□ -0.27
LINC00648-204ENST00000557749 KIAA1211Q6ZU35 1233 aa13.37□□□□□ -0.27
LINC00648-204ENST00000557749 KCTD1Q719H9 257 aa13.37□□□□□ -0.27
LINC00648-204ENST00000557749 RNF180Q86T96 592 aa13.37□□□□□ -0.27
LINC00648-204ENST00000557749 TBC1D10CQ8IV04 446 aa13.37□□□□□ -0.27
LINC00648-204ENST00000557749 SPC25Q9HBM1 224 aa13.37□□□□□ -0.27
LINC00648-204ENST00000557749 RNF146Q9NTX7 359 aa13.37□□□□□ -0.27
LINC00648-204ENST00000557749 FAM217BQ9NTX9 383 aaPredicted RBP13.37□□□□□ -0.27
LINC00648-204ENST00000557749 TSR3Q9UJK0 312 aaKnown RBP13.37□□□□□ -0.27
LINC00648-204ENST00000557749 PRR12Q9ULL5 1215 aa13.37□□□□□ -0.27
LINC00648-204ENST00000557749 ZNFX1Q9P2E3 1918 aaKnown RBP13.37□□□□□ -0.27
LINC00648-204ENST00000557749 PLXNA1Q9UIW2 1896 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 ERICH2A1L162 156 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 B4DLN1 442 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 KDM4AO75164 1064 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 PGK2P07205 417 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 PDHBP11177 359 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 SLC4A3P48751 1232 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 MRPL12P52815 198 aaKnown RBP13.36□□□□□ -0.27
LINC00648-204ENST00000557749 PTPN5P54829 565 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 TRAF1Q13077 416 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 ASPRV1Q53RT3 343 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 CASC1Q6TDU7 716 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 RALYLQ86SE5 291 aaKnown RBP13.36□□□□□ -0.27
LINC00648-204ENST00000557749 DIS3LQ8TF46 1054 aaKnown RBP13.36□□□□□ -0.27
LINC00648-204ENST00000557749 ANKS1AQ92625 1134 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 TRERF1Q96PN7 1200 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 ZSCAN10Q96SZ4 725 aaPredicted RBP13.36□□□□□ -0.27
LINC00648-204ENST00000557749 RANBP17Q9H2T7 1088 aaKnown RBP13.36□□□□□ -0.27
LINC00648-204ENST00000557749 ABHD16BQ9H3Z7 469 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 ADD3Q9UEY8 706 aaKnown RBP13.36□□□□□ -0.27
LINC00648-204ENST00000557749 FAM184BQ9ULE4 1060 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 CCPG1Q9ULG6 757 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 NEDD4P46934 1319 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 WDR19Q8NEZ3 1342 aa13.36□□□□□ -0.27
LINC00648-204ENST00000557749 FRMPD3Q5JV73 1810 aa13.35□□□□□ -0.27
LINC00648-204ENST00000557749 SNHG28P0DPA3 235 aa13.35□□□□□ -0.27
LINC00648-204ENST00000557749 ALAS1P13196 640 aa13.35□□□□□ -0.27
LINC00648-204ENST00000557749 CHMLP26374 656 aa13.35□□□□□ -0.27
LINC00648-204ENST00000557749 CLCN1P35523 988 aa13.35□□□□□ -0.27
LINC00648-204ENST00000557749 ZNF543Q08ER8 600 aa13.35□□□□□ -0.27
LINC00648-204ENST00000557749 XPNPEP3Q9NQH7 507 aa13.35□□□□□ -0.27
LINC00648-204ENST00000557749 INCENPQ9NQS7 918 aa13.35□□□□□ -0.27
LINC00648-204ENST00000557749 HOMER2Q9NSB8 354 aa13.35□□□□□ -0.27
LINC00648-204ENST00000557749 PRKAG2Q9UGJ0 569 aa13.35□□□□□ -0.27
LINC00648-204ENST00000557749 MTMR7Q9Y216 660 aa13.35□□□□□ -0.27
LINC00648-204ENST00000557749 RIPK3Q9Y572 518 aa13.35□□□□□ -0.27
LINC00648-204ENST00000557749 CEP290O15078 2479 aa13.35□□□□□ -0.27
LINC00648-204ENST00000557749 HABP4Q5JVS0 413 aaKnown RBP13.34□□□□□ -0.27
LINC00648-204ENST00000557749 IFIT1BQ5T764 474 aaKnown RBP13.34□□□□□ -0.27
LINC00648-204ENST00000557749 CCDC174Q6PII3 467 aa13.34□□□□□ -0.27
LINC00648-204ENST00000557749 PNMA1Q8ND90 353 aa13.34□□□□□ -0.27
LINC00648-204ENST00000557749 TRPV1Q8NER1 839 aa13.34□□□□□ -0.27
LINC00648-204ENST00000557749 ZNF536O15090 1300 aa13.34□□□□□ -0.27
LINC00648-204ENST00000557749 DDX11L8A8MPP1 907 aa13.33□□□□□ -0.28
LINC00648-204ENST00000557749 B4E1Z4 1266 aa13.33□□□□□ -0.28
LINC00648-204ENST00000557749 SGSM2O43147 1006 aa13.33□□□□□ -0.28
LINC00648-204ENST00000557749 CD46P15529 392 aa13.33□□□□□ -0.28
LINC00648-204ENST00000557749 C7orf61Q8IZ16 206 aa13.33□□□□□ -0.28
LINC00648-204ENST00000557749 FAM133AQ8N9E0 248 aa13.33□□□□□ -0.28
LINC00648-204ENST00000557749 NCOA7Q8NI08 942 aa13.33□□□□□ -0.28
LINC00648-204ENST00000557749 AGBL1Q96MI9 1066 aa13.33□□□□□ -0.28
LINC00648-204ENST00000557749 TSEN34Q9BSV6 310 aaKnown RBP13.33□□□□□ -0.28
LINC00648-204ENST00000557749 SENP6Q9GZR1 1112 aaPredicted RBP13.33□□□□□ -0.28
LINC00648-204ENST00000557749 A1CFQ9NQ94 594 aaKnown RBP13.33□□□□□ -0.28
LINC00648-204ENST00000557749 PLSCR2Q9NRY7 297 aa13.33□□□□□ -0.28
LINC00648-204ENST00000557749 ZHX1Q9UKY1 873 aaPredicted RBP13.33□□□□□ -0.28
LINC00648-204ENST00000557749 TNKSO95271 1327 aa13.33□□□□□ -0.28
LINC00648-204ENST00000557749 MOXD2PA6NHM9 499 aa13.32□□□□□ -0.28
LINC00648-204ENST00000557749 RNF40O75150 1001 aa13.32□□□□□ -0.28
LINC00648-204ENST00000557749 DUSP11O75319 330 aaKnown RBP13.32□□□□□ -0.28
LINC00648-204ENST00000557749 NEFLP07196 543 aa13.32□□□□□ -0.28
LINC00648-204ENST00000557749 PARP1P09874 1014 aaKnown RBP13.32□□□□□ -0.28
LINC00648-204ENST00000557749 ZNF865P0CJ78 1059 aaPredicted RBP13.32□□□□□ -0.28
LINC00648-204ENST00000557749 ACVR2BQ13705 512 aa13.32□□□□□ -0.28
LINC00648-204ENST00000557749 BMP2KLQ5H9B9 411 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms