RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 SYAP1Q96A49 352 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 P2RX7Q99572 595 aaKnown RBP16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 SRPRBQ9Y5M8 271 aaKnown RBP16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 MRVI1Q9Y6F6 885 aa16.48■□□□□ 0.23
ARHGEF40-208ENST00000557498 CCNT1O60563 726 aaKnown RBP16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 CFBP00751 764 aa16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 HOXA13P31271 388 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 IRX3P78415 501 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 PTGDRQ13258 359 aa16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 PABPC4Q13310 644 aaKnown RBP eCLIP16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 CCDC73Q6ZRK6 1079 aa16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 MCF2L2Q86YR7 1114 aa16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 C4orf32Q8N8J7 132 aa16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 FSIP1Q8NA03 581 aa16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 FERMT2Q96AC1 680 aa16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 GOLPH3LQ9H4A5 285 aa16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 TMEM63CQ9P1W3 806 aa16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 ZNF214Q9UL59 606 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF40-208ENST00000557498 LAD1O00515 517 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 NFIBO00712 420 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 KIF3CO14782 793 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 EDIL3O43854 480 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 NEMFO60524 1076 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 CMA1P23946 247 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 HSD17B4P51659 736 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 TMEM132BQ14DG7 1078 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 GPAT2Q6NUI2 795 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 LBX2Q6XYB7 198 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 SAMD3Q8N6K7 520 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 MB21D1Q8N884 522 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 ZNF579Q8NAF0 562 aaKnown RBP16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 CLIC6Q96NY7 704 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 NAP1L4Q99733 375 aaKnown RBP16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 TEX13BQ9BXU2 312 aa16.46■□□□□ 0.23
ARHGEF40-208ENST00000557498 PASKQ96RG2 1323 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 TDP2O95551 362 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 ZBTB48P10074 688 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 CETPP11597 493 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 GCFC2P16383 781 aaKnown RBP16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 OSBPP22059 807 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 SREBF1P36956 1147 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 GTF2A2P52657 109 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 HUNKP57058 714 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 GRIN1Q05586 938 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 TKFCQ3LXA3 575 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 MUM1L1Q5H9M0 696 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 CCDC183Q5T5S1 534 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 SPRYD7Q5W111 196 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 RESP18Q5W5W9 173 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 ARL6IP4Q66PJ3 421 aaKnown RBP16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 SNRNP48Q6IEG0 339 aaKnown RBP16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 PPP4R3AQ6IN85 833 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 SHC4Q6S5L8 630 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 FCHSD1Q86WN1 690 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 CRYGNQ8WXF5 182 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 TBC1D5Q92609 795 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 TRERF1Q96PN7 1200 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 GZF1Q9H116 711 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 ASCC2Q9H1I8 757 aaPredicted RBP16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 TMEM60Q9H2L4 133 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 EHMT1Q9H9B1 1298 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 HOMER2Q9NSB8 354 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 RNF146Q9NTX7 359 aa16.45■□□□□ 0.22
ARHGEF40-208ENST00000557498 FAM237AA0A1B0GTK4 181 aa16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 NR1I2O75469 434 aa16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 OR52Z1P0C646 297 aa16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 USP11P51784 963 aa16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 HERVK_113P62684 666 aa16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 ARHGAP4P98171 946 aa16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 FAM160A1Q05DH4 1040 aa16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 MOXD1Q6UVY6 613 aa16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 SMC1BQ8NDV3 1235 aa16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 MS4A4AQ96JQ5 239 aa16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 DDX19AQ9NUU7 478 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 DACT1Q9NYF0 836 aa16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 MAP3K20Q9NYL2 800 aaKnown RBP16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 SLC45A1Q9Y2W3 748 aa16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 RIPK3Q9Y572 518 aa16.44■□□□□ 0.22
ARHGEF40-208ENST00000557498 CCL15-CCL14A0A0B4J2E2 113 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 A0A1B0GVL5 298 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 PFKFB1P16118 471 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 STAT3P40763 770 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 PRPHP41219 470 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 MKRN3Q13064 507 aaKnown RBP16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 PLS1Q14651 629 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 CCL15Q16663 113 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 POTEEQ6S8J3 1075 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 ENGASEQ8NFI3 743 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 MBOAT7Q96N66 472 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 MAF1Q9H063 256 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 CSRNP2Q9H175 543 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 BTBD7Q9P203 1132 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 PNMA3Q9UL41 463 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 HPSEQ9Y251 543 aa16.43■□□□□ 0.22
ARHGEF40-208ENST00000557498 CYP3A7-CYP3A51PA0A087WV96 503 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 VWA3AA6NCI4 1184 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 SLC37A4O43826 429 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 CYP3A4P08684 503 aa16.42■□□□□ 0.22
ARHGEF40-208ENST00000557498 CYP3A7P24462 503 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms