RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	HELLS	Q9NRZ9	838 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	REV3L	O60673	3130 aa		13.22	□□□□□ -0.29
HNRNPC-231	ENST00000557336	RANBP6	O60518	1105 aa	Known RBP	13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	SMPD1	P17405	629 aa		13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	SLC16A2	P36021	539 aa		13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TNFAIP2	Q03169	654 aa		13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TKFC	Q3LXA3	575 aa		13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TMEM240	Q5SV17	173 aa		13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	MFSD5	Q6N075	450 aa		13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	PCSK9	Q8NBP7	692 aa	Known RBP	13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	MORC4	Q8TE76	937 aa		13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	MYLIP	Q8WY64	445 aa		13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	VWCE	Q96DN2	955 aa		13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	TMEM47	Q9BQJ4	181 aa		13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	RANBP17	Q9H2T7	1088 aa	Known RBP	13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	RYDEN	Q9NUL5	291 aa	Known RBP	13.21	□□□□□ -0.29
HNRNPC-231	ENST00000557336	LCT	P09848	1927 aa		13.2	□□□□□ -0.3
HNRNPC-231	ENST00000557336	C2orf72	A6NCS6	295 aa		13.2	□□□□□ -0.3
HNRNPC-231	ENST00000557336	ICAM1	P05362	532 aa		13.2	□□□□□ -0.3
HNRNPC-231	ENST00000557336	HSPD1	P10809	573 aa	Known RBP	13.2	□□□□□ -0.3
HNRNPC-231	ENST00000557336	CSF2RA	P15509	400 aa		13.2	□□□□□ -0.3
HNRNPC-231	ENST00000557336	IK	Q13123	557 aa	Predicted RBP	13.2	□□□□□ -0.3
HNRNPC-231	ENST00000557336	NMI	Q13287	307 aa	Predicted RBP	13.2	□□□□□ -0.3
HNRNPC-231	ENST00000557336	CXCL17	Q6UXB2	119 aa		13.2	□□□□□ -0.3
HNRNPC-231	ENST00000557336	DCAF4	Q8WV16	495 aa		13.2	□□□□□ -0.3
HNRNPC-231	ENST00000557336	ISY1	Q9ULR0	285 aa	Known RBP	13.2	□□□□□ -0.3
HNRNPC-231	ENST00000557336	MTMR7	Q9Y216	660 aa		13.2	□□□□□ -0.3
HNRNPC-231	ENST00000557336	TRANK1	O15050	2925 aa		13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	UMODL1	Q5DID0	1318 aa		13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336		A0A0U1RQG5	324 aa	Predicted RBP	13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	ASB14	A6NK59	587 aa		13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	NFIB	O00712	420 aa		13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	BAAT	Q14032	418 aa	Predicted RBP	13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	GRIN2C	Q14957	1233 aa		13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	MCMDC2	Q4G0Z9	681 aa		13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	EEPD1	Q7L9B9	569 aa		13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	TBC1D10C	Q8IV04	446 aa		13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	FBXO16	Q8IX29	292 aa	Predicted RBP	13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	CLEC4D	Q8WXI8	215 aa		13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	SPC25	Q9HBM1	224 aa		13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	TCP11L1	Q9NUJ3	509 aa		13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	CCPG1	Q9ULG6	757 aa		13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	LRRC37A2	A6NM11	1700 aa		13.19	□□□□□ -0.3
HNRNPC-231	ENST00000557336	ZMYM6	O95789	1325 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	GRXCR1	A8MXD5	290 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	DYNC1LI2	O43237	492 aa	Predicted RBP	13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	SNHG28	P0DPA3	235 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	ACR	P10323	421 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	PDHB	P11177	359 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	TOP1	P11387	765 aa	Known RBP	13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	CYP2C18	P33260	490 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	HAND2	P61296	217 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	FSCN1	Q16658	493 aa	Known RBP	13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	PPP4R3B	Q5MIZ7	849 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	LCE2D	Q5TA82	110 aa	Predicted RBP	13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	SYDE2	Q5VT97	1194 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	IQSEC1	Q6DN90	963 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	NSMF	Q6X4W1	530 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	TLK2	Q86UE8	772 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	TICAM2	Q86XR7	235 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	SMC5	Q8IY18	1101 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	MAFA	Q8NHW3	353 aa	Predicted RBP	13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	LNPK	Q9C0E8	428 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	GPCPD1	Q9NPB8	672 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	XIRP2	A4UGR9	3374 aa		13.18	□□□□□ -0.3
HNRNPC-231	ENST00000557336	MROH7	Q68CQ1	1323 aa		13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	TMEM265	A0A087WTH1	108 aa		13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	IGHD	P01880	384 aa		13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	DNAJB2	P25686	324 aa		13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	PBX2	P40425	430 aa		13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	PSMC6	P62333	389 aa		13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	CCDC96	Q2M329	555 aa		13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	RRP12	Q5JTH9	1297 aa	Known RBP	13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	SLC30A10	Q6XR72	485 aa		13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	ZNF365	Q70YC5	407 aa		13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	VTI1A	Q96AJ9	217 aa		13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	PPP1R12C	Q9BZL4	782 aa		13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	TRPV6	Q9H1D0	765 aa		13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.17	□□□□□ -0.3
HNRNPC-231	ENST00000557336	RBM47	A0AV96	593 aa	Known RBP	13.16	□□□□□ -0.3
HNRNPC-231	ENST00000557336	ZNF543	Q08ER8	600 aa		13.16	□□□□□ -0.3
HNRNPC-231	ENST00000557336	ITGA7	Q13683	1181 aa		13.16	□□□□□ -0.3
HNRNPC-231	ENST00000557336	NOL8	Q76FK4	1167 aa	Known RBP	13.16	□□□□□ -0.3
HNRNPC-231	ENST00000557336	PLEKHM2	Q8IWE5	1019 aa		13.16	□□□□□ -0.3
HNRNPC-231	ENST00000557336	USP38	Q8NB14	1042 aa		13.16	□□□□□ -0.3
HNRNPC-231	ENST00000557336	NOC4L	Q9BVI4	516 aa	Known RBP	13.16	□□□□□ -0.3
HNRNPC-231	ENST00000557336	PBX4	Q9BYU1	374 aa		13.16	□□□□□ -0.3
HNRNPC-231	ENST00000557336	WNT8A	Q9H1J5	351 aa		13.16	□□□□□ -0.3
HNRNPC-231	ENST00000557336	VTA1	Q9NP79	307 aa		13.16	□□□□□ -0.3
HNRNPC-231	ENST00000557336		Q9Y3F1	56 aa		13.16	□□□□□ -0.3
HNRNPC-231	ENST00000557336	CCDC171	Q6TFL3	1326 aa		13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	BDP1	A6H8Y1	2624 aa		13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	B4GALT4	O60513	344 aa		13.15	□□□□□ -0.3
HNRNPC-231	ENST00000557336	CABYR	O75952	493 aa		13.15	□□□□□ -0.3

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