RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CDADC1Q9BWV3 514 aa5.84□□□□□ -1.47
CHD8-212ENST00000557329 RGS17Q9UGC6 210 aaPredicted RBP5.84□□□□□ -1.47
CHD8-212ENST00000557329 SUGT1Q9Y2Z0 365 aa5.84□□□□□ -1.47
CHD8-212ENST00000557329 TAF6LQ9Y6J9 622 aa5.84□□□□□ -1.47
CHD8-212ENST00000557329 MAGI2Q86UL8 1455 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 TMEM82A0PJX8 343 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 SMAD7O15105 426 aaKnown RBP5.83□□□□□ -1.48
CHD8-212ENST00000557329 CBFA2T2O43439 604 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 CTSKP43235 329 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 RTP1P59025 263 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 AMPD2Q01433 879 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 SF3A1Q15459 793 aaKnown RBP5.83□□□□□ -1.48
CHD8-212ENST00000557329 SOGA3Q5TF21 947 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 GGT6Q6P531 493 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 CEP128Q6ZU80 1094 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 MCF2L2Q86YR7 1114 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 KLHL6Q8WZ60 621 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 CCDC140Q96MF4 163 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 SLC26A8Q96RN1 970 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 G6PC3Q9BUM1 346 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 YBX2Q9Y2T7 364 aaKnown RBP5.83□□□□□ -1.48
CHD8-212ENST00000557329 ARHGEF12Q9NZN5 1544 aa5.83□□□□□ -1.48
CHD8-212ENST00000557329 CFAP74Q9C0B2 1584 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 A0A1W2PQ27 194 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 A0A1W2PQ64 194 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 A0A1W2PQC6 194 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 A0A1W2PQD8 194 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 FADS2P1A8MWK0 482 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 MEIS1O00470 390 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 STK10O94804 968 aaKnown RBP5.82□□□□□ -1.48
CHD8-212ENST00000557329 EPHX1P07099 455 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 PNLIPP16233 465 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 ATP2B1P20020 1258 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 NAALADL2Q58DX5 795 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 CRTC3Q6UUV7 619 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 EEPD1Q7L9B9 569 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 FAM178BQ8IXR5 827 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 CKAP2LQ8IYA6 745 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 FAM169BQ8N8A8 192 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 FBXO15Q8NCQ5 510 aaPredicted RBP5.82□□□□□ -1.48
CHD8-212ENST00000557329 BVESQ8NE79 360 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 HIRIP3Q9BW71 556 aaPredicted RBP5.82□□□□□ -1.48
CHD8-212ENST00000557329 SLC12A9Q9BXP2 914 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 EPB41L4BQ9H329 900 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 NOL6Q9H6R4 1146 aaKnown RBP5.82□□□□□ -1.48
CHD8-212ENST00000557329 ZNF408Q9H9D4 720 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 GPR160Q9UJ42 338 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 CTTNBP2Q8WZ74 1663 aa5.82□□□□□ -1.48
CHD8-212ENST00000557329 IQCA1LA6NCM1 817 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 ZNF503-AS2A6NEH8 195 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 H0Y8X5 98 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 U2SURPO15042 1029 aaKnown RBP5.81□□□□□ -1.48
CHD8-212ENST00000557329 PEX10O60683 326 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 FKTNO75072 461 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 DDAH1O94760 285 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 GSTM1P09488 218 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 MEX3CQ5U5Q3 659 aaKnown RBP5.81□□□□□ -1.48
CHD8-212ENST00000557329 IQCEQ6IPM2 695 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 JAMLQ86YT9 394 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 NLGN2Q8NFZ4 835 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 BRF1Q92994 677 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 ZNF669Q96BR6 464 aaPredicted RBP5.81□□□□□ -1.48
CHD8-212ENST00000557329 HHIPL1Q96JK4 782 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 KRTAP4-5Q9BYR2 181 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 ERVK13-1Q9NX77 482 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 AKT3Q9Y243 479 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 MRVI1Q9Y6F6 885 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 SUPT6HQ7KZ85 1726 aaKnown RBP5.81□□□□□ -1.48
CHD8-212ENST00000557329 C3P01024 1663 aa5.81□□□□□ -1.48
CHD8-212ENST00000557329 ZMYM3Q14202 1370 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 OR14I1A6ND48 311 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 AURKAO14965 403 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 FGF10O15520 208 aaPredicted RBP5.8□□□□□ -1.48
CHD8-212ENST00000557329 SEPHS1P49903 392 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 MLANAQ16655 118 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 FYB2Q5VWT5 728 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 LARP1BQ659C4 914 aaKnown RBP5.8□□□□□ -1.48
CHD8-212ENST00000557329 NLRX1Q86UT6 975 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 INTS4Q96HW7 963 aaKnown RBP5.8□□□□□ -1.48
CHD8-212ENST00000557329 ZDHHC15Q96MV8 337 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 SP110Q9HB58 689 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 DCP1AQ9NPI6 582 aaPredicted RBP5.8□□□□□ -1.48
CHD8-212ENST00000557329 AP5S1Q9NUS5 200 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 CGGBP1Q9UFW8 167 aaPredicted RBP5.8□□□□□ -1.48
CHD8-212ENST00000557329 ACSL6Q9UKU0 697 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 PCDHB10Q9UN67 800 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 BACE2Q9Y5Z0 518 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 RAPGEF6Q8TEU7 1601 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 PTPRKQ15262 1439 aa5.8□□□□□ -1.48
CHD8-212ENST00000557329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.79□□□□□ -1.48
CHD8-212ENST00000557329 SEMA7AO75326 666 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 CPP00450 1065 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 MPOP05164 745 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 CD3EP07766 207 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 ETFBP38117 255 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 MESP2Q0VG99 397 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 RTP2Q5QGT7 225 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 SLCO6A1Q86UG4 719 aa5.79□□□□□ -1.48
CHD8-212ENST00000557329 ANKLE2Q86XL3 938 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms