RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MKRN2Q9H000 416 aaKnown RBP6.7□□□□□ -1.34
SRP54-211ENST00000556445 MINPP1Q9UNW1 487 aa6.7□□□□□ -1.34
SRP54-211ENST00000556445 EFCAB6Q5THR3 1501 aa6.7□□□□□ -1.34
SRP54-211ENST00000556445 ZMYM4Q5VZL5 1548 aa6.7□□□□□ -1.34
SRP54-211ENST00000556445 KIF1BO60333 1816 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 TRPM1Q7Z4N2 1603 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 MROH1Q8NDA8 1641 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 ZC3H13Q5T200 1668 aaKnown RBP6.69□□□□□ -1.34
SRP54-211ENST00000556445 hCG_2014768A0A024R1R8 64 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 SHOXO15266 292 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 TRHRP34981 398 aaPredicted RBP6.69□□□□□ -1.34
SRP54-211ENST00000556445 PMS1P54277 932 aaKnown RBP6.69□□□□□ -1.34
SRP54-211ENST00000556445 MESP2Q0VG99 397 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 ZNF648Q5T619 568 aaPredicted RBP6.69□□□□□ -1.34
SRP54-211ENST00000556445 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 FBXW10Q5XX13 1052 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 CCDC81Q6ZN84 652 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 PPFIBP1Q86W92 1011 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 NLGN1Q8N2Q7 840 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 PDZD8Q8NEN9 1154 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 LINC01599Q8WXQ3 324 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 MYLIPQ8WY64 445 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 DHRS1Q96LJ7 313 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 FOXP3Q9BZS1 431 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 FAM53CQ9NYF3 392 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 WASHC2AQ641Q2 1341 aa6.69□□□□□ -1.34
SRP54-211ENST00000556445 TMEM82A0PJX8 343 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 LRRC10BA6NIK2 292 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 C8AP07357 584 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 GUCY2CP25092 1073 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 AUHQ13825 339 aaKnown RBP6.68□□□□□ -1.34
SRP54-211ENST00000556445 MLANAQ16655 118 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 RGL3Q3MIN7 710 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 BBS9Q3SYG4 887 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 TIGD5Q53EQ6 642 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 UNC5AQ6ZN44 842 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 LINC00116Q8NCU8 138 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 TGIF2Q9GZN2 237 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 PIF1Q9H611 641 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 CHST7Q9NS84 486 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 GFOD1Q9NXC2 390 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 PCDHB12Q9Y5F1 795 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 DIP2CQ9Y2E4 1556 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 ABCA6Q8N139 1617 aa6.68□□□□□ -1.34
SRP54-211ENST00000556445 KIAA1210Q9ULL0 1709 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 REREQ9P2R6 1566 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 FARP2O94887 1054 aaPredicted RBP6.67□□□□□ -1.34
SRP54-211ENST00000556445 PARNO95453 639 aaKnown RBP6.67□□□□□ -1.34
SRP54-211ENST00000556445 ATP2B1P20020 1258 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 CTSKP43235 329 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 NR0B2Q15466 257 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 TDRD10Q5VZ19 366 aaKnown RBP6.67□□□□□ -1.34
SRP54-211ENST00000556445 PRR23BQ6ZRT6 265 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 KRTAP1-3Q8IUG1 177 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 C7orf61Q8IZ16 206 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 BRINP2Q9C0B6 783 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 ACBD3Q9H3P7 528 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 C19orf44Q9H6X5 657 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 PRR13Q9NZ81 148 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 TCFL5Q9UL49 500 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 CLTCL1P53675 1640 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 RPGRIP1LQ68CZ1 1315 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 WASHC2CQ9Y4E1 1318 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 ARHGAP31Q2M1Z3 1444 aa6.67□□□□□ -1.34
SRP54-211ENST00000556445 FRMPD1Q5SYB0 1578 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 PPRC1Q5VV67 1664 aaKnown RBP6.66□□□□□ -1.34
SRP54-211ENST00000556445 FITM1A5D6W6 292 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 NOTOA8MTQ0 251 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 RAPGEF3O95398 923 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 MAP4K4O95819 1239 aaPredicted RBP6.66□□□□□ -1.34
SRP54-211ENST00000556445 SYPP08247 313 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 GIPRP48546 466 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 PCBP3P57721 371 aaKnown RBP6.66□□□□□ -1.34
SRP54-211ENST00000556445 DUSP4Q13115 394 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 AXDND1Q5T1B0 1012 aaPredicted RBP6.66□□□□□ -1.34
SRP54-211ENST00000556445 GGT6Q6P531 493 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 OXR1Q8N573 874 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 MORC4Q8TE76 937 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 YTHDC1Q96MU7 727 aaKnown RBP6.66□□□□□ -1.34
SRP54-211ENST00000556445 RNF32Q9H0A6 362 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 MAGEC2Q9UBF1 373 aaPredicted RBP6.66□□□□□ -1.34
SRP54-211ENST00000556445 FBXL21Q9UKT6 434 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 KIF7Q2M1P5 1343 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 LTBP3Q9NS15 1303 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 EIF3AQ14152 1382 aaKnown RBP6.66□□□□□ -1.34
SRP54-211ENST00000556445 KTN1Q86UP2 1357 aaKnown RBP6.66□□□□□ -1.34
SRP54-211ENST00000556445 MYOM2P54296 1465 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 AGLP35573 1532 aa6.66□□□□□ -1.34
SRP54-211ENST00000556445 EFEMP2O95967 443 aa6.65□□□□□ -1.34
SRP54-211ENST00000556445 YBX3P16989 372 aaKnown RBP eCLIP6.65□□□□□ -1.34
SRP54-211ENST00000556445 RPL10P27635 214 aaKnown RBP6.65□□□□□ -1.34
SRP54-211ENST00000556445 GTF2F1P35269 517 aaKnown RBP eCLIP6.65□□□□□ -1.34
SRP54-211ENST00000556445 NASPP49321 788 aaPredicted RBP6.65□□□□□ -1.34
SRP54-211ENST00000556445 EIF6P56537 245 aaKnown RBP6.65□□□□□ -1.34
SRP54-211ENST00000556445 TCEAL1Q15170 157 aa6.65□□□□□ -1.34
SRP54-211ENST00000556445 ANKRD39Q53RE8 183 aa6.65□□□□□ -1.34
SRP54-211ENST00000556445 DCAF15Q66K64 600 aa6.65□□□□□ -1.34
SRP54-211ENST00000556445 MPZL3Q6UWV2 235 aa6.65□□□□□ -1.34
SRP54-211ENST00000556445 ZPBP2Q6X784 338 aa6.65□□□□□ -1.34
SRP54-211ENST00000556445 WAPLQ7Z5K2 1190 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms