RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 NCOA3Q9Y6Q9 1424 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 USP32Q8NFA0 1604 aa4.79□□□□□ -1.64
EFCAB11-210ENST00000556078 ADGRB2O60241 1585 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 TRPM2O94759 1503 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 FAM83GA6ND36 823 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 ZBTB7AO95365 584 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 KCNC1P48547 511 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 ERVFRD-1P60508 538 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 PDE4BQ07343 736 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 NPM2Q86SE8 214 aaKnown RBP4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 LDHDQ86WU2 507 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 UNC5CLQ8IV45 518 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 CCDC82Q8N4S0 544 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 JMYQ8N9B5 988 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 VWCEQ96DN2 955 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 EID1Q9Y6B2 187 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 SBF2Q86WG5 1849 aa4.78□□□□□ -1.64
EFCAB11-210ENST00000556078 XRN1Q8IZH2 1706 aaKnown RBP4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 GCC2Q8IWJ2 1684 aa4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 PTPN23Q9H3S7 1636 aa4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 FFAR3O14843 346 aa4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 SLURP1P55000 103 aa4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 RPS26P62854 115 aaKnown RBP4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 SLC14A2Q15849 920 aa4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 CRB2Q5IJ48 1285 aa4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 RNF111Q6ZNA4 994 aa4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 ZNF526Q8TF50 670 aaPredicted RBP4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 ACSF2Q96CM8 615 aaPredicted RBP4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 MAP6Q96JE9 813 aa4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 SLITRK6Q9H5Y7 841 aa4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 PCDHA5Q9Y5H7 936 aa4.77□□□□□ -1.65
EFCAB11-210ENST00000556078 ZNF644Q9H582 1327 aaPredicted RBP4.76□□□□□ -1.65
EFCAB11-210ENST00000556078 C1QTNF3-AMACRE9PGA6 284 aa4.76□□□□□ -1.65
EFCAB11-210ENST00000556078 USP2O75604 605 aaPredicted RBP4.76□□□□□ -1.65
EFCAB11-210ENST00000556078 ADAM17P78536 824 aa4.76□□□□□ -1.65
EFCAB11-210ENST00000556078 UBXN11Q5T124 520 aa4.76□□□□□ -1.65
EFCAB11-210ENST00000556078 TTBK2Q6IQ55 1244 aa4.76□□□□□ -1.65
EFCAB11-210ENST00000556078 ENOX1Q8TC92 643 aaKnown RBP4.76□□□□□ -1.65
EFCAB11-210ENST00000556078 KLHL14Q9P2G3 628 aa4.76□□□□□ -1.65
EFCAB11-210ENST00000556078 MBD5Q9P267 1494 aa4.75□□□□□ -1.65
EFCAB11-210ENST00000556078 ADAMTS13Q76LX8 1427 aa4.75□□□□□ -1.65
EFCAB11-210ENST00000556078 SHISA3A0PJX4 238 aa4.75□□□□□ -1.65
EFCAB11-210ENST00000556078 TREHO43280 583 aa4.75□□□□□ -1.65
EFCAB11-210ENST00000556078 LRRN2O75325 713 aa4.75□□□□□ -1.65
EFCAB11-210ENST00000556078 MPOP05164 745 aa4.75□□□□□ -1.65
EFCAB11-210ENST00000556078 SDHBP21912 280 aa4.75□□□□□ -1.65
EFCAB11-210ENST00000556078 TMEM62Q0P6H9 643 aa4.75□□□□□ -1.65
EFCAB11-210ENST00000556078 CEP128Q6ZU80 1094 aa4.75□□□□□ -1.65
EFCAB11-210ENST00000556078 NLGN1Q8N2Q7 840 aa4.75□□□□□ -1.65
EFCAB11-210ENST00000556078 ORAI2Q96SN7 254 aa4.75□□□□□ -1.65
EFCAB11-210ENST00000556078 ASPNQ9BXN1 380 aa4.75□□□□□ -1.65
EFCAB11-210ENST00000556078 USTQ9Y2C2 406 aa4.75□□□□□ -1.65
EFCAB11-210ENST00000556078 ZFYVE9O95405 1425 aa4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 CLIP1P30622 1438 aa4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 DCCP43146 1447 aa4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 ADGRL3Q9HAR2 1447 aa4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 KIAA1107Q9UPP5 1409 aa4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 RPL10P27635 214 aaKnown RBP4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 HHIPL1Q96JK4 782 aa4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 FAM8A1Q9UBU6 413 aa4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 CCDC9Q9Y3X0 531 aaKnown RBP4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 NRXN3Q9Y4C0 1643 aa4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 ADCY9O60503 1353 aa4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 COL24A1Q17RW2 1714 aa4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 ARHGEF28Q8N1W1 1705 aaKnown RBP4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 C1orf167Q5SNV9 1468 aa4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 PXDNQ92626 1479 aa4.74□□□□□ -1.65
EFCAB11-210ENST00000556078 IRS2Q9Y4H2 1338 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 RGPD3A6NKT7 1758 aaPredicted RBP4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 RGPD4Q7Z3J3 1758 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 NOS1P29475 1434 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 BUB1BO60566 1050 aaPredicted RBP4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 SLPIP03973 132 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 HSPA1AP0DMV8 641 aaKnown RBP4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 HSPA1BP0DMV9 641 aaKnown RBP4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 IGFBP6P24592 240 aaPredicted RBP4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 GDF5P43026 501 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 XPCQ01831 940 aaPredicted RBP4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 IDI1Q13907 227 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 SEPT6Q14141 434 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 CBX2Q14781 532 aaPredicted RBP4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 VPS72Q15906 364 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 GPR162Q16538 588 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 CLEC16AQ2KHT3 1053 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 TMC6Q7Z403 805 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 ZFPM1Q8IX07 1006 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 USHBP1Q8N6Y0 703 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 SYTL5Q8TDW5 730 aaPredicted RBP4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 PLCD4Q9BRC7 762 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 C1QTNF3Q9BXJ4 246 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 ZMYM5Q9UJ78 669 aa4.73□□□□□ -1.65
EFCAB11-210ENST00000556078 C6P13671 934 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 YARSP54577 528 aaKnown RBP4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 LAPTM5Q13571 262 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 CPZQ66K79 652 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 WAPLQ7Z5K2 1190 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 AEBP1Q8IUX7 1158 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 SLFN12Q8IYM2 578 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 NLGN2Q8NFZ4 835 aa4.72□□□□□ -1.65
EFCAB11-210ENST00000556078 KREMEN1Q96MU8 473 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms