RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 USP17L15C9J2P7 530 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 USP17L13C9JLJ4 530 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 USP17L11C9JVI0 530 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 USP17L18D6R9N7 530 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 USP17L22D6RA61 530 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 USP17L17D6RBQ6 530 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 USP17L19D6RCP7 530 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 USP17L20D6RJB6 530 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 SLC37A4O43826 429 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 EDIL3O43854 480 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 ZNF18P17022 549 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 CAP2P40123 477 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 ECE1P42892 770 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 ZNF280AP59817 542 aaPredicted RBP11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 USP17L24Q0WX57 530 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 LRMPQ12912 555 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 KCNB1Q14721 858 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 R3HDM1Q15032 1099 aaKnown RBP11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 USP17L6PQ6QN14 398 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 TMC6Q7Z403 805 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 SPICE1Q8N0Z3 855 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 LTBP3Q9NS15 1303 aa11.37□□□□□ -0.59
EFCAB11-209ENST00000556005 MARCH6O60337 910 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 FOSP01100 380 aaPredicted RBP11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 ASNSP08243 561 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 PLCG1P19174 1290 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 DNTTIP2Q5QJE6 756 aaKnown RBP11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 KLHL10Q6JEL2 608 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 TEX2Q8IWB9 1127 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 TRMT44Q8IYL2 757 aaKnown RBP11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 CCDC150Q8NCX0 1101 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 CHURC1Q8WUH1 139 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 CCDC47Q96A33 483 aaKnown RBP11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 PLIN2Q99541 437 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 PGAP2Q9UHJ9 254 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 PRR12Q9ULL5 1215 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 SYNRGQ9UMZ2 1314 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 MEIS2O14770 477 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 NRDCO43847 1150 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 RASA3Q14644 834 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 USH1GQ495M9 461 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 KRT79Q5XKE5 535 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 MOXD1Q6UVY6 613 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 ACER1Q8TDN7 264 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 DPF2Q92785 391 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 CDK5RAP3Q96JB5 506 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 MED15Q96RN5 788 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 SGIP1Q9BQI5 828 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 ANO3Q9BYT9 981 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 GTPBP4Q9BZE4 634 aaKnown RBP11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 VCPKMTQ9H867 229 aa11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 SAMSN1Q9NSI8 373 aaKnown RBP11.36□□□□□ -0.59
EFCAB11-209ENST00000556005 FER1L6Q2WGJ9 1857 aa11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 CYP3A7-CYP3A51PA0A087WV96 503 aa11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 SPDYE3A6NKU9 549 aa11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 PLA2G6O60733 806 aa11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 SKILP12757 684 aa11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 CYP3A7P24462 503 aa11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 PAK1Q13153 545 aa11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 TPD52L1Q16890 204 aaPredicted RBP11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 CDAN1Q8IWY9 1227 aa11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 SMYD4Q8IYR2 804 aaPredicted RBP11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 NAP1L5Q96NT1 182 aaPredicted RBP11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 CTAGE1Q96RT6 745 aa11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 MMTAG2Q9BU76 263 aaKnown RBP11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 STK17AQ9UEE5 414 aa11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 RWDD2AQ9UIY3 292 aa11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 PCDHA12Q9UN75 941 aa11.35□□□□□ -0.59
EFCAB11-209ENST00000556005 RHOBTB3O94955 611 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 SFPQP23246 707 aaKnown RBP eCLIP11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 STX17P56962 302 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 SNAP25P60880 206 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 STIM1Q13586 685 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 KMT5BQ4FZB7 885 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 HSP90AA4PQ58FG1 418 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 FAM83BQ5T0W9 1011 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 SV2BQ7L1I2 683 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 VSTM4Q8IW00 320 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 C17orf53Q8N3J3 647 aaPredicted RBP11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 C7orf25Q9BPX7 421 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 LRRC27Q9C0I9 530 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 CTNND2Q9UQB3 1225 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 SHTN1A0MZ66 631 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 FZD9O00144 591 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 ARID5BQ14865 1188 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 FAM160B2Q86V87 743 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 MICALL2Q8IY33 904 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 SLFN12Q8IYM2 578 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 SNX29Q8TEQ0 813 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 HAS1Q92839 578 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 TRIM9Q9C026 710 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 GINM1Q9NU53 330 aa11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 CNOT7Q9UIV1 285 aaKnown RBP11.34□□□□□ -0.59
EFCAB11-209ENST00000556005 ARFGEF1Q9Y6D6 1849 aa11.33□□□□□ -0.6
EFCAB11-209ENST00000556005 POTEMA6NI47 508 aa11.33□□□□□ -0.6
EFCAB11-209ENST00000556005 PIK3CDO00329 1044 aa11.33□□□□□ -0.6
EFCAB11-209ENST00000556005 KLRC4O43908 158 aa11.33□□□□□ -0.6
EFCAB11-209ENST00000556005 BRCA1P38398 1863 aaKnown RBP11.33□□□□□ -0.6
EFCAB11-209ENST00000556005 PPP1R2P41236 205 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms