RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 TMEM39BQ9GZU3 492 aa7.49□□□□□ -1.21
PSEN1-214ENST00000555867 RBSNQ9H1K0 784 aa7.49□□□□□ -1.21
PSEN1-214ENST00000555867 ZCCHC17Q9NP64 241 aaKnown RBP7.49□□□□□ -1.21
PSEN1-214ENST00000555867 ORC3Q9UBD5 711 aaPredicted RBP7.49□□□□□ -1.21
PSEN1-214ENST00000555867 ZNF70Q9UC06 446 aaPredicted RBP7.49□□□□□ -1.21
PSEN1-214ENST00000555867 RCOR1Q9UKL0 485 aa7.49□□□□□ -1.21
PSEN1-214ENST00000555867 LEMD3Q9Y2U8 911 aa7.49□□□□□ -1.21
PSEN1-214ENST00000555867 SLC4A4Q9Y6R1 1079 aa7.49□□□□□ -1.21
PSEN1-214ENST00000555867 COL2A1P02458 1487 aaPredicted RBP7.49□□□□□ -1.21
PSEN1-214ENST00000555867 TMEM265A0A087WTH1 108 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 CCDC69A6NI79 296 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 GSG1L2A8MUP6 293 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 ESPNB1AK53 854 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 ZBTB43O43298 467 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 MYO1BO43795 1136 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 WDHD1O75717 1129 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-214ENST00000555867 ADH1CP00326 375 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 SLC3A2P08195 630 aaKnown RBP7.48□□□□□ -1.21
PSEN1-214ENST00000555867 BCRP11274 1271 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 CYP7A1P22680 504 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 FLT3LGP49771 235 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 CCT2P78371 535 aaKnown RBP7.48□□□□□ -1.21
PSEN1-214ENST00000555867 SNAPC2Q13487 334 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 MOGSQ13724 837 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 COL9A3Q14050 684 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-214ENST00000555867 TRIM29Q14134 588 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 TMEM67Q5HYA8 995 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 DESI1Q6ICB0 168 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 NFXL1Q6ZNB6 911 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 CCDC73Q6ZRK6 1079 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 RBM43Q6ZSC3 357 aaKnown RBP7.48□□□□□ -1.21
PSEN1-214ENST00000555867 C15orf52Q6ZUT6 534 aaKnown RBP7.48□□□□□ -1.21
PSEN1-214ENST00000555867 ERO1BQ86YB8 467 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 TBC1D10CQ8IV04 446 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 FBXO18Q8NFZ0 1043 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 PRR7Q8TB68 274 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 SPIRE2Q8WWL2 714 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 ESR2Q92731 530 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 DDX11Q96FC9 970 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 CHAMP1Q96JM3 812 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 TNMDQ9H2S6 317 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 SEMA6BQ9H3T3 888 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 CLSTN2Q9H4D0 955 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 TDRD3Q9H7E2 651 aaKnown RBP7.48□□□□□ -1.21
PSEN1-214ENST00000555867 EPB41L4AQ9HCS5 686 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-214ENST00000555867 CD209Q9NNX6 404 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 POLR3EQ9NVU0 708 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 RAI14Q9P0K7 980 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 CCDC39Q9UFE4 941 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 JAG2Q9Y219 1238 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 CSADQ9Y600 493 aa7.48□□□□□ -1.21
PSEN1-214ENST00000555867 CDK5RAP2Q96SN8 1893 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 A0A1W2PQ27 194 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 A0A1W2PQ64 194 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 A0A1W2PQD8 194 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 GOLGA8AA7E2F4 631 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 B4E1Z4 1266 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 PDHXO00330 501 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 IFIT3O14879 490 aaKnown RBP7.47□□□□□ -1.21
PSEN1-214ENST00000555867 TPM3P06753 285 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 CALM1P0DP23 149 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 CALM2P0DP24 149 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 CALM3P0DP25 149 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 TIMP2P16035 220 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 MSNP26038 577 aaKnown RBP7.47□□□□□ -1.21
PSEN1-214ENST00000555867 HIBADHP31937 336 aaKnown RBP7.47□□□□□ -1.21
PSEN1-214ENST00000555867 FCGRTP55899 365 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 WDR4P57081 412 aaKnown RBP7.47□□□□□ -1.21
PSEN1-214ENST00000555867 GSTO1P78417 241 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 PPARAQ07869 468 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 WTAPQ15007 396 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 CCDC178Q5BJE1 867 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 ZNF804AQ7Z570 1209 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 ZSCAN30Q86W11 494 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 TRIM22Q8IYM9 498 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 LCORLQ8N3X6 602 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 WDR66Q8TBY9 1149 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 FAM200AQ8TCP9 573 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 IGDCC4Q8TDY8 1250 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 MYLIPQ8WY64 445 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 ZKSCAN4Q969J2 545 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-214ENST00000555867 FAM84BQ96KN1 310 aaPredicted RBP7.47□□□□□ -1.21
PSEN1-214ENST00000555867 UBAC1Q9BSL1 405 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 FUCA2Q9BTY2 467 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 CRNKL1Q9BZJ0 848 aaKnown RBP7.47□□□□□ -1.21
PSEN1-214ENST00000555867 ARMT1Q9H993 441 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 LY9Q9HBG7 655 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 NCOA5Q9HCD5 579 aaKnown RBP7.47□□□□□ -1.21
PSEN1-214ENST00000555867 ATP8A2Q9NTI2 1148 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 RTEL1Q9NZ71 1219 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 ABCF2Q9UG63 623 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 SLC12A7Q9Y666 1083 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 FOCADQ5VW36 1801 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 PFASO15067 1338 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 NEDD4P46934 1319 aa7.47□□□□□ -1.21
PSEN1-214ENST00000555867 TCP10L2B9ZVM9 353 aa7.46□□□□□ -1.22
PSEN1-214ENST00000555867 KINO60870 393 aaKnown RBP7.46□□□□□ -1.22
PSEN1-214ENST00000555867 LDHCP07864 332 aa7.46□□□□□ -1.22
PSEN1-214ENST00000555867 VSIG8P0DPA2 414 aa7.46□□□□□ -1.22
PSEN1-214ENST00000555867 CYP2C8P10632 490 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms